data_4O0M # _model_server_result.job_id X2Ix_JoI1k7QDHbgi7Indg _model_server_result.datetime_utc '2024-11-24 02:31:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o0m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":804}' # _entry.id 4O0M # _exptl.entry_id 4O0M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O0M _cell.length_a 130.81 _cell.length_b 195.29 _cell.length_c 136.64 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O0M _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -68.32 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 H N N ? 2 J N N ? 2 L N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 430 A ILE 430 1_555 A N SEP 431 A SEP 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C SEP 431 A SEP 431 1_555 A N TPO 432 A TPO 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 A C TPO 432 A TPO 432 1_555 A N ILE 433 A ILE 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C ILE 430 B ILE 430 1_555 B N SEP 431 B SEP 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 B C SEP 431 B SEP 431 1_555 B N TPO 432 B TPO 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale6 B C TPO 432 B TPO 432 1_555 B N ILE 433 B ILE 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 C C ILE 430 C ILE 430 1_555 C N SEP 431 C SEP 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 C C SEP 431 C SEP 431 1_555 C N TPO 432 C TPO 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 C C TPO 432 C TPO 432 1_555 C N ILE 433 C ILE 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A OG1 THR 54 A THR 54 1_555 G MG MG . A MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc2 A OE2 GLU 79 A GLU 79 1_555 G MG MG . A MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc3 A OG1 THR 295 A THR 295 1_555 D MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc4 D MG MG . A MG 801 1_555 E O3B ATP . A ATP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? metalc ? metalc5 D MG MG . A MG 801 1_555 E O2G ATP . A ATP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc6 B OG1 THR 54 B THR 54 1_555 J MG MG . B MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc7 B OG1 THR 295 B THR 295 1_555 H MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc8 H MG MG . B MG 601 1_555 I O3B ATP . B ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc9 H MG MG . B MG 601 1_555 I O2G ATP . B ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc10 J MG MG . B MG 603 1_555 K O3B ATP . B ATP 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc11 C OG1 THR 54 C THR 54 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc12 C OG1 THR 295 C THR 295 1_555 L MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc13 L MG MG . C MG 601 1_555 M O3B ATP . C ATP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc14 N O3B ATP . C ATP 603 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc15 N O2G ATP . C ATP 603 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc16 N O3G ATP . C ATP 603 1_555 O MG MG . C MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.969 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4O0M _atom_sites.fract_transf_matrix[1][1] 0.007645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007319 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MG A 1 801 801 MG MG . E 3 ATP A 1 802 901 ATP ATP . F 3 ATP A 1 803 903 ATP ATP . G 2 MG A 1 804 2 MG MG . H 2 MG B 1 601 802 MG MG . I 3 ATP B 1 602 901 ATP ATP . J 2 MG B 1 603 805 MG MG . K 3 ATP B 1 604 903 ATP ATP . L 2 MG C 1 601 803 MG MG . M 3 ATP C 1 602 901 ATP ATP . N 3 ATP C 1 603 903 ATP ATP . O 2 MG C 1 604 804 MG MG . P 4 HOH A 1 901 4 HOH HOH . P 4 HOH A 2 902 6 HOH HOH . P 4 HOH A 3 903 7 HOH HOH . P 4 HOH A 4 904 11 HOH HOH . P 4 HOH A 5 905 12 HOH HOH . P 4 HOH A 6 906 13 HOH HOH . P 4 HOH A 7 907 17 HOH HOH . P 4 HOH A 8 908 21 HOH HOH . P 4 HOH A 9 909 24 HOH HOH . P 4 HOH A 10 910 28 HOH HOH . P 4 HOH A 11 911 30 HOH HOH . P 4 HOH A 12 912 31 HOH HOH . P 4 HOH A 13 913 33 HOH HOH . P 4 HOH A 14 914 40 HOH HOH . P 4 HOH A 15 915 49 HOH HOH . P 4 HOH A 16 916 53 HOH HOH . P 4 HOH A 17 917 55 HOH HOH . P 4 HOH A 18 918 56 HOH HOH . P 4 HOH A 19 919 60 HOH HOH . P 4 HOH A 20 920 63 HOH HOH . P 4 HOH A 21 921 68 HOH HOH . P 4 HOH A 22 922 69 HOH HOH . P 4 HOH A 23 923 72 HOH HOH . P 4 HOH A 24 924 73 HOH HOH . P 4 HOH A 25 925 74 HOH HOH . P 4 HOH A 26 926 77 HOH HOH . P 4 HOH A 27 927 78 HOH HOH . P 4 HOH A 28 928 83 HOH HOH . P 4 HOH A 29 929 84 HOH HOH . P 4 HOH A 30 930 87 HOH HOH . P 4 HOH A 31 931 88 HOH HOH . P 4 HOH A 32 932 90 HOH HOH . P 4 HOH A 33 933 98 HOH HOH . P 4 HOH A 34 934 101 HOH HOH . P 4 HOH A 35 935 109 HOH HOH . P 4 HOH A 36 936 110 HOH HOH . P 4 HOH A 37 937 115 HOH HOH . P 4 HOH A 38 938 119 HOH HOH . P 4 HOH A 39 939 126 HOH HOH . P 4 HOH A 40 940 130 HOH HOH . P 4 HOH A 41 941 133 HOH HOH . P 4 HOH A 42 942 136 HOH HOH . P 4 HOH A 43 943 143 HOH HOH . P 4 HOH A 44 944 146 HOH HOH . P 4 HOH A 45 945 147 HOH HOH . P 4 HOH A 46 946 157 HOH HOH . P 4 HOH A 47 947 158 HOH HOH . P 4 HOH A 48 948 159 HOH HOH . P 4 HOH A 49 949 165 HOH HOH . P 4 HOH A 50 950 166 HOH HOH . P 4 HOH A 51 951 167 HOH HOH . P 4 HOH A 52 952 171 HOH HOH . P 4 HOH A 53 953 173 HOH HOH . P 4 HOH A 54 954 180 HOH HOH . P 4 HOH A 55 955 184 HOH HOH . P 4 HOH A 56 956 194 HOH HOH . P 4 HOH A 57 957 195 HOH HOH . P 4 HOH A 58 958 200 HOH HOH . P 4 HOH A 59 959 202 HOH HOH . P 4 HOH A 60 960 209 HOH HOH . P 4 HOH A 61 961 213 HOH HOH . P 4 HOH A 62 962 214 HOH HOH . P 4 HOH A 63 963 222 HOH HOH . P 4 HOH A 64 964 250 HOH HOH . P 4 HOH A 65 965 254 HOH HOH . P 4 HOH A 66 966 255 HOH HOH . P 4 HOH A 67 967 256 HOH HOH . P 4 HOH A 68 968 257 HOH HOH . P 4 HOH A 69 969 263 HOH HOH . P 4 HOH A 70 970 268 HOH HOH . P 4 HOH A 71 971 269 HOH HOH . P 4 HOH A 72 972 270 HOH HOH . P 4 HOH A 73 973 272 HOH HOH . P 4 HOH A 74 974 282 HOH HOH . P 4 HOH A 75 975 285 HOH HOH . P 4 HOH A 76 976 293 HOH HOH . P 4 HOH A 77 977 297 HOH HOH . P 4 HOH A 78 978 299 HOH HOH . P 4 HOH A 79 979 303 HOH HOH . P 4 HOH A 80 980 304 HOH HOH . Q 4 HOH B 1 701 1 HOH HOH . Q 4 HOH B 2 702 8 HOH HOH . Q 4 HOH B 3 703 10 HOH HOH . Q 4 HOH B 4 704 16 HOH HOH . Q 4 HOH B 5 705 22 HOH HOH . Q 4 HOH B 6 706 23 HOH HOH . Q 4 HOH B 7 707 25 HOH HOH . Q 4 HOH B 8 708 29 HOH HOH . Q 4 HOH B 9 709 34 HOH HOH . Q 4 HOH B 10 710 35 HOH HOH . Q 4 HOH B 11 711 39 HOH HOH . Q 4 HOH B 12 712 42 HOH HOH . Q 4 HOH B 13 713 43 HOH HOH . Q 4 HOH B 14 714 45 HOH HOH . Q 4 HOH B 15 715 47 HOH HOH . Q 4 HOH B 16 716 48 HOH HOH . Q 4 HOH B 17 717 52 HOH HOH . Q 4 HOH B 18 718 54 HOH HOH . Q 4 HOH B 19 719 57 HOH HOH . Q 4 HOH B 20 720 61 HOH HOH . Q 4 HOH B 21 721 67 HOH HOH . Q 4 HOH B 22 722 80 HOH HOH . Q 4 HOH B 23 723 86 HOH HOH . Q 4 HOH B 24 724 89 HOH HOH . Q 4 HOH B 25 725 93 HOH HOH . Q 4 HOH B 26 726 94 HOH HOH . Q 4 HOH B 27 727 99 HOH HOH . Q 4 HOH B 28 728 103 HOH HOH . Q 4 HOH B 29 729 104 HOH HOH . Q 4 HOH B 30 730 105 HOH HOH . Q 4 HOH B 31 731 107 HOH HOH . Q 4 HOH B 32 732 123 HOH HOH . Q 4 HOH B 33 733 127 HOH HOH . Q 4 HOH B 34 734 128 HOH HOH . Q 4 HOH B 35 735 131 HOH HOH . Q 4 HOH B 36 736 132 HOH HOH . Q 4 HOH B 37 737 135 HOH HOH . Q 4 HOH B 38 738 137 HOH HOH . Q 4 HOH B 39 739 139 HOH HOH . Q 4 HOH B 40 740 140 HOH HOH . Q 4 HOH B 41 741 145 HOH HOH . Q 4 HOH B 42 742 152 HOH HOH . Q 4 HOH B 43 743 162 HOH HOH . Q 4 HOH B 44 744 163 HOH HOH . Q 4 HOH B 45 745 170 HOH HOH . Q 4 HOH B 46 746 177 HOH HOH . Q 4 HOH B 47 747 178 HOH HOH . Q 4 HOH B 48 748 191 HOH HOH . Q 4 HOH B 49 749 196 HOH HOH . Q 4 HOH B 50 750 203 HOH HOH . Q 4 HOH B 51 751 205 HOH HOH . Q 4 HOH B 52 752 206 HOH HOH . Q 4 HOH B 53 753 215 HOH HOH . Q 4 HOH B 54 754 217 HOH HOH . Q 4 HOH B 55 755 218 HOH HOH . Q 4 HOH B 56 756 230 HOH HOH . Q 4 HOH B 57 757 238 HOH HOH . Q 4 HOH B 58 758 239 HOH HOH . Q 4 HOH B 59 759 246 HOH HOH . Q 4 HOH B 60 760 253 HOH HOH . Q 4 HOH B 61 761 271 HOH HOH . Q 4 HOH B 62 762 275 HOH HOH . Q 4 HOH B 63 763 287 HOH HOH . Q 4 HOH B 64 764 302 HOH HOH . Q 4 HOH B 65 765 314 HOH HOH . Q 4 HOH B 66 766 315 HOH HOH . R 4 HOH C 1 701 2 HOH HOH . R 4 HOH C 2 702 3 HOH HOH . R 4 HOH C 3 703 5 HOH HOH . R 4 HOH C 4 704 9 HOH HOH . R 4 HOH C 5 705 15 HOH HOH . R 4 HOH C 6 706 19 HOH HOH . R 4 HOH C 7 707 20 HOH HOH . R 4 HOH C 8 708 26 HOH HOH . R 4 HOH C 9 709 32 HOH HOH . R 4 HOH C 10 710 36 HOH HOH . R 4 HOH C 11 711 37 HOH HOH . R 4 HOH C 12 712 44 HOH HOH . R 4 HOH C 13 713 46 HOH HOH . R 4 HOH C 14 714 50 HOH HOH . R 4 HOH C 15 715 59 HOH HOH . R 4 HOH C 16 716 65 HOH HOH . R 4 HOH C 17 717 70 HOH HOH . R 4 HOH C 18 718 71 HOH HOH . R 4 HOH C 19 719 75 HOH HOH . R 4 HOH C 20 720 81 HOH HOH . R 4 HOH C 21 721 95 HOH HOH . R 4 HOH C 22 722 102 HOH HOH . R 4 HOH C 23 723 106 HOH HOH . R 4 HOH C 24 724 108 HOH HOH . R 4 HOH C 25 725 112 HOH HOH . R 4 HOH C 26 726 118 HOH HOH . R 4 HOH C 27 727 120 HOH HOH . R 4 HOH C 28 728 122 HOH HOH . R 4 HOH C 29 729 125 HOH HOH . R 4 HOH C 30 730 129 HOH HOH . R 4 HOH C 31 731 148 HOH HOH . R 4 HOH C 32 732 149 HOH HOH . R 4 HOH C 33 733 151 HOH HOH . R 4 HOH C 34 734 153 HOH HOH . R 4 HOH C 35 735 155 HOH HOH . R 4 HOH C 36 736 156 HOH HOH . R 4 HOH C 37 737 161 HOH HOH . R 4 HOH C 38 738 168 HOH HOH . R 4 HOH C 39 739 186 HOH HOH . R 4 HOH C 40 740 187 HOH HOH . R 4 HOH C 41 741 192 HOH HOH . R 4 HOH C 42 742 198 HOH HOH . R 4 HOH C 43 743 199 HOH HOH . R 4 HOH C 44 744 204 HOH HOH . R 4 HOH C 45 745 210 HOH HOH . R 4 HOH C 46 746 212 HOH HOH . R 4 HOH C 47 747 234 HOH HOH . R 4 HOH C 48 748 241 HOH HOH . R 4 HOH C 49 749 247 HOH HOH . R 4 HOH C 50 750 262 HOH HOH . R 4 HOH C 51 751 264 HOH HOH . R 4 HOH C 52 752 277 HOH HOH . R 4 HOH C 53 753 283 HOH HOH . R 4 HOH C 54 754 286 HOH HOH . R 4 HOH C 55 755 289 HOH HOH . R 4 HOH C 56 756 298 HOH HOH . R 4 HOH C 57 757 307 HOH HOH . R 4 HOH C 58 758 310 HOH HOH . R 4 HOH C 59 759 318 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -19.742 _atom_site.Cartn_y 21.314 _atom_site.Cartn_z -11.43 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 804 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #