data_4O16 # _model_server_result.job_id gv0-HLlh2UYeNPLe5OstJQ _model_server_result.datetime_utc '2024-11-07 16:41:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o16 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":615}' # _entry.id 4O16 # _exptl.entry_id 4O16 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O16 _cell.length_a 84.671 _cell.length_b 107.36 _cell.length_c 52.78 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O16 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 155 n n C1 C2 EDO sing 156 n n C1 H11 EDO sing 157 n n C1 H12 EDO sing 158 n n O1 HO1 EDO sing 159 n n C2 O2 EDO sing 160 n n C2 H21 EDO sing 161 n n C2 H22 EDO sing 162 n n O2 HO2 EDO sing 163 n n # _atom_sites.entry_id 4O16 _atom_sites.fract_transf_matrix[1][1] 0.01181 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1XC A 1 601 1 1XC LIG . C 3 PO4 A 1 602 1 PO4 PO4 . D 4 EDO A 1 603 1 EDO EDO . E 4 EDO A 1 604 1 EDO EDO . F 4 EDO A 1 605 5 EDO EDO . G 4 EDO A 1 606 6 EDO EDO . H 4 EDO A 1 607 7 EDO EDO . I 4 EDO A 1 608 8 EDO EDO . J 3 PO4 A 1 609 9 PO4 PO4 . K 4 EDO A 1 610 10 EDO EDO . L 4 EDO A 1 611 11 EDO EDO . M 4 EDO A 1 612 12 EDO EDO . N 4 EDO A 1 613 13 EDO EDO . O 4 EDO A 1 614 14 EDO EDO . P 4 EDO A 1 615 15 EDO EDO . Q 4 EDO A 1 616 16 EDO EDO . R 5 HOH A 1 701 1 HOH HOH . R 5 HOH A 2 702 2 HOH HOH . R 5 HOH A 3 703 3 HOH HOH . R 5 HOH A 4 704 4 HOH HOH . R 5 HOH A 5 705 5 HOH HOH . R 5 HOH A 6 706 6 HOH HOH . R 5 HOH A 7 707 7 HOH HOH . R 5 HOH A 8 708 8 HOH HOH . R 5 HOH A 9 709 9 HOH HOH . R 5 HOH A 10 710 10 HOH HOH . R 5 HOH A 11 711 11 HOH HOH . R 5 HOH A 12 712 12 HOH HOH . R 5 HOH A 13 713 13 HOH HOH . R 5 HOH A 14 714 14 HOH HOH . R 5 HOH A 15 715 15 HOH HOH . R 5 HOH A 16 716 16 HOH HOH . R 5 HOH A 17 717 17 HOH HOH . R 5 HOH A 18 718 18 HOH HOH . R 5 HOH A 19 719 19 HOH HOH . R 5 HOH A 20 720 20 HOH HOH . R 5 HOH A 21 721 21 HOH HOH . R 5 HOH A 22 722 22 HOH HOH . R 5 HOH A 23 723 23 HOH HOH . R 5 HOH A 24 724 24 HOH HOH . R 5 HOH A 25 725 25 HOH HOH . R 5 HOH A 26 726 26 HOH HOH . R 5 HOH A 27 727 27 HOH HOH . R 5 HOH A 28 728 28 HOH HOH . R 5 HOH A 29 729 29 HOH HOH . R 5 HOH A 30 730 30 HOH HOH . R 5 HOH A 31 731 31 HOH HOH . R 5 HOH A 32 732 32 HOH HOH . R 5 HOH A 33 733 33 HOH HOH . R 5 HOH A 34 734 34 HOH HOH . R 5 HOH A 35 735 35 HOH HOH . R 5 HOH A 36 736 36 HOH HOH . R 5 HOH A 37 737 37 HOH HOH . R 5 HOH A 38 738 38 HOH HOH . R 5 HOH A 39 739 39 HOH HOH . R 5 HOH A 40 740 40 HOH HOH . R 5 HOH A 41 741 41 HOH HOH . R 5 HOH A 42 742 42 HOH HOH . R 5 HOH A 43 743 43 HOH HOH . R 5 HOH A 44 744 44 HOH HOH . R 5 HOH A 45 745 45 HOH HOH . R 5 HOH A 46 746 46 HOH HOH . R 5 HOH A 47 747 47 HOH HOH . R 5 HOH A 48 748 48 HOH HOH . R 5 HOH A 49 749 49 HOH HOH . R 5 HOH A 50 750 50 HOH HOH . R 5 HOH A 51 751 52 HOH HOH . R 5 HOH A 52 752 53 HOH HOH . R 5 HOH A 53 753 54 HOH HOH . R 5 HOH A 54 754 55 HOH HOH . R 5 HOH A 55 755 56 HOH HOH . R 5 HOH A 56 756 57 HOH HOH . R 5 HOH A 57 757 58 HOH HOH . R 5 HOH A 58 758 59 HOH HOH . R 5 HOH A 59 759 60 HOH HOH . R 5 HOH A 60 760 61 HOH HOH . R 5 HOH A 61 761 62 HOH HOH . R 5 HOH A 62 762 63 HOH HOH . R 5 HOH A 63 763 64 HOH HOH . R 5 HOH A 64 764 65 HOH HOH . R 5 HOH A 65 765 66 HOH HOH . R 5 HOH A 66 766 67 HOH HOH . R 5 HOH A 67 767 68 HOH HOH . R 5 HOH A 68 768 69 HOH HOH . R 5 HOH A 69 769 70 HOH HOH . R 5 HOH A 70 770 71 HOH HOH . R 5 HOH A 71 771 72 HOH HOH . R 5 HOH A 72 772 73 HOH HOH . R 5 HOH A 73 773 74 HOH HOH . R 5 HOH A 74 774 75 HOH HOH . R 5 HOH A 75 775 76 HOH HOH . R 5 HOH A 76 776 77 HOH HOH . R 5 HOH A 77 777 78 HOH HOH . R 5 HOH A 78 778 79 HOH HOH . R 5 HOH A 79 779 80 HOH HOH . R 5 HOH A 80 780 82 HOH HOH . R 5 HOH A 81 781 83 HOH HOH . R 5 HOH A 82 782 84 HOH HOH . R 5 HOH A 83 783 85 HOH HOH . R 5 HOH A 84 784 86 HOH HOH . R 5 HOH A 85 785 87 HOH HOH . R 5 HOH A 86 786 88 HOH HOH . R 5 HOH A 87 787 89 HOH HOH . R 5 HOH A 88 788 90 HOH HOH . R 5 HOH A 89 789 91 HOH HOH . R 5 HOH A 90 790 92 HOH HOH . R 5 HOH A 91 791 93 HOH HOH . R 5 HOH A 92 792 94 HOH HOH . R 5 HOH A 93 793 95 HOH HOH . R 5 HOH A 94 794 96 HOH HOH . R 5 HOH A 95 795 97 HOH HOH . R 5 HOH A 96 796 98 HOH HOH . R 5 HOH A 97 797 99 HOH HOH . R 5 HOH A 98 798 100 HOH HOH . R 5 HOH A 99 799 101 HOH HOH . R 5 HOH A 100 800 102 HOH HOH . R 5 HOH A 101 801 103 HOH HOH . R 5 HOH A 102 802 104 HOH HOH . R 5 HOH A 103 803 105 HOH HOH . R 5 HOH A 104 804 106 HOH HOH . R 5 HOH A 105 805 107 HOH HOH . R 5 HOH A 106 806 108 HOH HOH . R 5 HOH A 107 807 109 HOH HOH . R 5 HOH A 108 808 110 HOH HOH . R 5 HOH A 109 809 111 HOH HOH . R 5 HOH A 110 810 112 HOH HOH . R 5 HOH A 111 811 113 HOH HOH . R 5 HOH A 112 812 114 HOH HOH . R 5 HOH A 113 813 115 HOH HOH . R 5 HOH A 114 814 116 HOH HOH . R 5 HOH A 115 815 117 HOH HOH . R 5 HOH A 116 816 118 HOH HOH . R 5 HOH A 117 817 119 HOH HOH . R 5 HOH A 118 818 120 HOH HOH . R 5 HOH A 119 819 121 HOH HOH . R 5 HOH A 120 820 122 HOH HOH . R 5 HOH A 121 821 123 HOH HOH . R 5 HOH A 122 822 124 HOH HOH . R 5 HOH A 123 823 125 HOH HOH . R 5 HOH A 124 824 127 HOH HOH . R 5 HOH A 125 825 128 HOH HOH . R 5 HOH A 126 826 129 HOH HOH . R 5 HOH A 127 827 130 HOH HOH . R 5 HOH A 128 828 132 HOH HOH . R 5 HOH A 129 829 133 HOH HOH . R 5 HOH A 130 830 134 HOH HOH . R 5 HOH A 131 831 135 HOH HOH . R 5 HOH A 132 832 136 HOH HOH . R 5 HOH A 133 833 137 HOH HOH . R 5 HOH A 134 834 138 HOH HOH . R 5 HOH A 135 835 139 HOH HOH . R 5 HOH A 136 836 140 HOH HOH . R 5 HOH A 137 837 141 HOH HOH . R 5 HOH A 138 838 142 HOH HOH . R 5 HOH A 139 839 143 HOH HOH . R 5 HOH A 140 840 144 HOH HOH . R 5 HOH A 141 841 145 HOH HOH . R 5 HOH A 142 842 146 HOH HOH . R 5 HOH A 143 843 147 HOH HOH . R 5 HOH A 144 844 148 HOH HOH . R 5 HOH A 145 845 149 HOH HOH . R 5 HOH A 146 846 150 HOH HOH . R 5 HOH A 147 847 151 HOH HOH . R 5 HOH A 148 848 152 HOH HOH . R 5 HOH A 149 849 153 HOH HOH . R 5 HOH A 150 850 154 HOH HOH . R 5 HOH A 151 851 155 HOH HOH . R 5 HOH A 152 852 156 HOH HOH . R 5 HOH A 153 853 157 HOH HOH . R 5 HOH A 154 854 158 HOH HOH . R 5 HOH A 155 855 159 HOH HOH . R 5 HOH A 156 856 160 HOH HOH . R 5 HOH A 157 857 161 HOH HOH . R 5 HOH A 158 858 162 HOH HOH . R 5 HOH A 159 859 163 HOH HOH . R 5 HOH A 160 860 164 HOH HOH . R 5 HOH A 161 861 165 HOH HOH . R 5 HOH A 162 862 166 HOH HOH . R 5 HOH A 163 863 167 HOH HOH . R 5 HOH A 164 864 168 HOH HOH . R 5 HOH A 165 865 169 HOH HOH . R 5 HOH A 166 866 170 HOH HOH . R 5 HOH A 167 867 171 HOH HOH . R 5 HOH A 168 868 172 HOH HOH . R 5 HOH A 169 869 173 HOH HOH . R 5 HOH A 170 870 174 HOH HOH . R 5 HOH A 171 871 175 HOH HOH . R 5 HOH A 172 872 176 HOH HOH . R 5 HOH A 173 873 177 HOH HOH . R 5 HOH A 174 874 178 HOH HOH . R 5 HOH A 175 875 180 HOH HOH . R 5 HOH A 176 876 181 HOH HOH . R 5 HOH A 177 877 182 HOH HOH . R 5 HOH A 178 878 183 HOH HOH . R 5 HOH A 179 879 184 HOH HOH . R 5 HOH A 180 880 185 HOH HOH . R 5 HOH A 181 881 186 HOH HOH . R 5 HOH A 182 882 187 HOH HOH . R 5 HOH A 183 883 188 HOH HOH . R 5 HOH A 184 884 189 HOH HOH . R 5 HOH A 185 885 190 HOH HOH . R 5 HOH A 186 886 191 HOH HOH . R 5 HOH A 187 887 192 HOH HOH . R 5 HOH A 188 888 193 HOH HOH . R 5 HOH A 189 889 194 HOH HOH . R 5 HOH A 190 890 195 HOH HOH . R 5 HOH A 191 891 196 HOH HOH . R 5 HOH A 192 892 198 HOH HOH . R 5 HOH A 193 893 199 HOH HOH . R 5 HOH A 194 894 200 HOH HOH . R 5 HOH A 195 895 202 HOH HOH . R 5 HOH A 196 896 204 HOH HOH . R 5 HOH A 197 897 205 HOH HOH . R 5 HOH A 198 898 206 HOH HOH . R 5 HOH A 199 899 207 HOH HOH . R 5 HOH A 200 900 208 HOH HOH . R 5 HOH A 201 901 209 HOH HOH . R 5 HOH A 202 902 210 HOH HOH . R 5 HOH A 203 903 211 HOH HOH . R 5 HOH A 204 904 212 HOH HOH . R 5 HOH A 205 905 214 HOH HOH . R 5 HOH A 206 906 215 HOH HOH . R 5 HOH A 207 907 216 HOH HOH . R 5 HOH A 208 908 217 HOH HOH . R 5 HOH A 209 909 218 HOH HOH . R 5 HOH A 210 910 219 HOH HOH . R 5 HOH A 211 911 221 HOH HOH . R 5 HOH A 212 912 222 HOH HOH . R 5 HOH A 213 913 223 HOH HOH . R 5 HOH A 214 914 224 HOH HOH . R 5 HOH A 215 915 225 HOH HOH . R 5 HOH A 216 916 226 HOH HOH . R 5 HOH A 217 917 227 HOH HOH . R 5 HOH A 218 918 228 HOH HOH . R 5 HOH A 219 919 229 HOH HOH . R 5 HOH A 220 920 230 HOH HOH . R 5 HOH A 221 921 231 HOH HOH . R 5 HOH A 222 922 232 HOH HOH . R 5 HOH A 223 923 233 HOH HOH . R 5 HOH A 224 924 234 HOH HOH . R 5 HOH A 225 925 235 HOH HOH . R 5 HOH A 226 926 236 HOH HOH . R 5 HOH A 227 927 237 HOH HOH . R 5 HOH A 228 928 238 HOH HOH . R 5 HOH A 229 929 239 HOH HOH . R 5 HOH A 230 930 240 HOH HOH . R 5 HOH A 231 931 241 HOH HOH . R 5 HOH A 232 932 242 HOH HOH . R 5 HOH A 233 933 243 HOH HOH . R 5 HOH A 234 934 244 HOH HOH . R 5 HOH A 235 935 245 HOH HOH . R 5 HOH A 236 936 246 HOH HOH . R 5 HOH A 237 937 247 HOH HOH . R 5 HOH A 238 938 248 HOH HOH . R 5 HOH A 239 939 249 HOH HOH . R 5 HOH A 240 940 250 HOH HOH . R 5 HOH A 241 941 251 HOH HOH . R 5 HOH A 242 942 252 HOH HOH . R 5 HOH A 243 943 253 HOH HOH . R 5 HOH A 244 944 254 HOH HOH . R 5 HOH A 245 945 255 HOH HOH . R 5 HOH A 246 946 256 HOH HOH . R 5 HOH A 247 947 257 HOH HOH . R 5 HOH A 248 948 258 HOH HOH . R 5 HOH A 249 949 259 HOH HOH . R 5 HOH A 250 950 260 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . P 4 -14.975 -24.566 4.591 1 35.56 ? C1 EDO 615 A 1 HETATM 2 O O1 EDO . . . P 4 -14.919 -23.127 4.498 1 17.99 ? O1 EDO 615 A 1 HETATM 3 C C2 EDO . . . P 4 -16.38 -25.041 4.968 1 41.71 ? C2 EDO 615 A 1 HETATM 4 O O2 EDO . . . P 4 -16.806 -24.433 6.199 1 43.61 ? O2 EDO 615 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #