data_4O2A # _model_server_result.job_id 3dNrSMfNW9EhPZgEP6FNPg _model_server_result.datetime_utc '2024-11-28 10:29:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o2a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":501}' # _entry.id 4O2A # _exptl.entry_id 4O2A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O2A _cell.length_a 104.53 _cell.length_b 158.12 _cell.length_c 179.73 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O2A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 M N N ? 11 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc2 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc6 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc7 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.796 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc10 G O2G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc11 H MG MG . A MG 502 1_555 AA O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc12 H MG MG . A MG 502 1_555 AA O HOH . A HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc13 H MG MG . A MG 502 1_555 AA O HOH . A HOH 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc14 H MG MG . A MG 502 1_555 AA O HOH . A HOH 633 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc15 AA O HOH . A HOH 650 1_555 Y CA CA . E CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc16 AA O HOH . A HOH 651 1_555 Y CA CA . E CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? metalc ? metalc17 B OE2 GLU 111 B GLU 113 1_555 O CA CA . B CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? metalc ? metalc18 N MG MG . B MG 502 1_555 BA O HOH . B HOH 639 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? metalc ? metalc19 R MG MG . B MG 506 1_555 BA O HOH . B HOH 639 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc20 R MG MG . B MG 506 1_555 BA O HOH . B HOH 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc21 R MG MG . B MG 506 1_555 CA O HOH . C HOH 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? metalc ? metalc22 C OD2 ASP 39 C ASP 39 1_555 T CA CA . C CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc23 C OD1 ASP 39 C ASP 39 1_555 T CA CA . C CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc24 C OG1 THR 41 C THR 41 1_555 T CA CA . C CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc25 C O THR 41 C THR 41 1_555 T CA CA . C CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc26 C O GLY 44 C GLY 44 1_555 T CA CA . C CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc27 C OE2 GLU 55 C GLU 55 1_555 T CA CA . C CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc28 C OE1 GLU 55 C GLU 55 1_555 T CA CA . C CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc29 S O1G GTP . C GTP 501 1_555 U MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc30 S O1B GTP . C GTP 501 1_555 U MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc31 CA O HOH . C HOH 601 1_555 U MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc32 CA O HOH . C HOH 604 1_555 U MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc33 CA O HOH . C HOH 608 1_555 U MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc34 CA O HOH . C HOH 719 1_555 U MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc35 D OE1 GLN 11 D GLN 11 1_555 W MG MG . D MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc36 V O1A GDP . D GDP 602 1_555 W MG MG . D MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc37 W MG MG . D MG 603 1_555 DA O HOH . D HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc38 W MG MG . D MG 603 1_555 DA O HOH . D HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc39 E OD2 ASP 42 E ASP 44 1_555 Y CA CA . E CA 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.19 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 176 n n PB O2B GDP sing 177 n n PB O3B GDP sing 178 n n PB O3A GDP sing 179 n n O2B HOB2 GDP sing 180 n n O3B HOB3 GDP sing 181 n n O3A PA GDP sing 182 n n PA O1A GDP doub 183 n n PA O2A GDP sing 184 n n PA O5' GDP sing 185 n n O2A HOA2 GDP sing 186 n n O5' C5' GDP sing 187 n n C5' C4' GDP sing 188 n n C5' H5' GDP sing 189 n n C5' "H5''" GDP sing 190 n n C4' O4' GDP sing 191 n n C4' C3' GDP sing 192 n n C4' H4' GDP sing 193 n n O4' C1' GDP sing 194 n n C3' O3' GDP sing 195 n n C3' C2' GDP sing 196 n n C3' H3' GDP sing 197 n n O3' HO3' GDP sing 198 n n C2' O2' GDP sing 199 n n C2' C1' GDP sing 200 n n C2' H2' GDP sing 201 n n O2' HO2' GDP sing 202 n n C1' N9 GDP sing 203 n n C1' H1' GDP sing 204 n n N9 C8 GDP sing 205 n y N9 C4 GDP sing 206 n y C8 N7 GDP doub 207 n y C8 H8 GDP sing 208 n n N7 C5 GDP sing 209 n y C5 C6 GDP sing 210 n n C5 C4 GDP doub 211 n y C6 O6 GDP doub 212 n n C6 N1 GDP sing 213 n n N1 C2 GDP sing 214 n n N1 HN1 GDP sing 215 n n C2 N2 GDP sing 216 n n C2 N3 GDP doub 217 n n N2 HN21 GDP sing 218 n n N2 HN22 GDP sing 219 n n N3 C4 GDP sing 220 n n # _atom_sites.entry_id 4O2A _atom_sites.fract_transf_matrix[1][1] 0.009567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 600 GTP GTP . H 6 MG A 1 502 601 MG MG . I 7 CA A 1 503 700 CA CA . J 8 CL A 1 504 800 CL CL . K 9 GOL A 1 505 1 GOL GOL . L 10 IMD A 1 506 1 IMD IMD . M 11 GDP B 1 501 600 GDP GDP . N 6 MG B 1 502 601 MG MG . O 7 CA B 1 503 700 CA CA . P 12 2RR B 1 504 900 2RR BAL . Q 13 MES B 1 505 1 MES MES . R 6 MG B 1 506 1 MG MG . S 5 GTP C 1 501 600 GTP GTP . T 7 CA C 1 502 700 CA CA . U 6 MG D 1 601 601 MG MG . V 11 GDP D 1 602 600 GDP GDP . W 6 MG D 1 603 601 MG MG . X 12 2RR D 1 604 900 2RR BAL . Y 7 CA E 1 700 700 CA CA . Z 14 ADP F 1 401 702 ADP ADP . AA 15 HOH A 1 601 1 HOH HOH . AA 15 HOH A 2 602 12 HOH HOH . AA 15 HOH A 3 603 18 HOH HOH . AA 15 HOH A 4 604 21 HOH HOH . AA 15 HOH A 5 605 25 HOH HOH . AA 15 HOH A 6 606 29 HOH HOH . AA 15 HOH A 7 607 36 HOH HOH . AA 15 HOH A 8 608 42 HOH HOH . AA 15 HOH A 9 609 43 HOH HOH . AA 15 HOH A 10 610 44 HOH HOH . AA 15 HOH A 11 611 58 HOH HOH . AA 15 HOH A 12 612 65 HOH HOH . AA 15 HOH A 13 613 74 HOH HOH . AA 15 HOH A 14 614 76 HOH HOH . AA 15 HOH A 15 615 78 HOH HOH . AA 15 HOH A 16 616 79 HOH HOH . AA 15 HOH A 17 617 91 HOH HOH . AA 15 HOH A 18 618 97 HOH HOH . AA 15 HOH A 19 619 106 HOH HOH . AA 15 HOH A 20 620 109 HOH HOH . AA 15 HOH A 21 621 120 HOH HOH . AA 15 HOH A 22 622 123 HOH HOH . AA 15 HOH A 23 623 125 HOH HOH . AA 15 HOH A 24 624 129 HOH HOH . AA 15 HOH A 25 625 132 HOH HOH . AA 15 HOH A 26 626 143 HOH HOH . AA 15 HOH A 27 627 150 HOH HOH . AA 15 HOH A 28 628 161 HOH HOH . AA 15 HOH A 29 629 182 HOH HOH . AA 15 HOH A 30 630 185 HOH HOH . AA 15 HOH A 31 631 186 HOH HOH . AA 15 HOH A 32 632 187 HOH HOH . AA 15 HOH A 33 633 188 HOH HOH . AA 15 HOH A 34 634 191 HOH HOH . AA 15 HOH A 35 635 192 HOH HOH . AA 15 HOH A 36 636 201 HOH HOH . AA 15 HOH A 37 637 202 HOH HOH . AA 15 HOH A 38 638 203 HOH HOH . AA 15 HOH A 39 639 205 HOH HOH . AA 15 HOH A 40 640 228 HOH HOH . AA 15 HOH A 41 641 232 HOH HOH . AA 15 HOH A 42 642 233 HOH HOH . AA 15 HOH A 43 643 235 HOH HOH . AA 15 HOH A 44 644 236 HOH HOH . AA 15 HOH A 45 645 239 HOH HOH . AA 15 HOH A 46 646 247 HOH HOH . AA 15 HOH A 47 647 250 HOH HOH . AA 15 HOH A 48 648 253 HOH HOH . AA 15 HOH A 49 649 254 HOH HOH . AA 15 HOH A 50 650 255 HOH HOH . AA 15 HOH A 51 651 256 HOH HOH . AA 15 HOH A 52 652 257 HOH HOH . AA 15 HOH A 53 653 258 HOH HOH . AA 15 HOH A 54 654 259 HOH HOH . AA 15 HOH A 55 655 260 HOH HOH . AA 15 HOH A 56 656 261 HOH HOH . AA 15 HOH A 57 657 262 HOH HOH . AA 15 HOH A 58 658 263 HOH HOH . AA 15 HOH A 59 659 264 HOH HOH . AA 15 HOH A 60 660 336 HOH HOH . AA 15 HOH A 61 661 337 HOH HOH . AA 15 HOH A 62 662 338 HOH HOH . AA 15 HOH A 63 663 339 HOH HOH . BA 15 HOH B 1 601 4 HOH HOH . BA 15 HOH B 2 602 10 HOH HOH . BA 15 HOH B 3 603 11 HOH HOH . BA 15 HOH B 4 604 27 HOH HOH . BA 15 HOH B 5 605 30 HOH HOH . BA 15 HOH B 6 606 34 HOH HOH . BA 15 HOH B 7 607 37 HOH HOH . BA 15 HOH B 8 608 46 HOH HOH . BA 15 HOH B 9 609 50 HOH HOH . BA 15 HOH B 10 610 53 HOH HOH . BA 15 HOH B 11 611 59 HOH HOH . BA 15 HOH B 12 612 61 HOH HOH . BA 15 HOH B 13 613 68 HOH HOH . BA 15 HOH B 14 614 80 HOH HOH . BA 15 HOH B 15 615 84 HOH HOH . BA 15 HOH B 16 616 89 HOH HOH . BA 15 HOH B 17 617 101 HOH HOH . BA 15 HOH B 18 618 103 HOH HOH . BA 15 HOH B 19 619 107 HOH HOH . BA 15 HOH B 20 620 110 HOH HOH . BA 15 HOH B 21 621 133 HOH HOH . BA 15 HOH B 22 622 142 HOH HOH . BA 15 HOH B 23 623 144 HOH HOH . BA 15 HOH B 24 624 155 HOH HOH . BA 15 HOH B 25 625 159 HOH HOH . BA 15 HOH B 26 626 163 HOH HOH . BA 15 HOH B 27 627 170 HOH HOH . BA 15 HOH B 28 628 180 HOH HOH . BA 15 HOH B 29 629 181 HOH HOH . BA 15 HOH B 30 630 183 HOH HOH . BA 15 HOH B 31 631 189 HOH HOH . BA 15 HOH B 32 632 190 HOH HOH . BA 15 HOH B 33 633 193 HOH HOH . BA 15 HOH B 34 634 195 HOH HOH . BA 15 HOH B 35 635 204 HOH HOH . BA 15 HOH B 36 636 208 HOH HOH . BA 15 HOH B 37 637 209 HOH HOH . BA 15 HOH B 38 638 210 HOH HOH . BA 15 HOH B 39 639 211 HOH HOH . BA 15 HOH B 40 640 212 HOH HOH . BA 15 HOH B 41 641 213 HOH HOH . BA 15 HOH B 42 642 234 HOH HOH . BA 15 HOH B 43 643 238 HOH HOH . BA 15 HOH B 44 644 240 HOH HOH . BA 15 HOH B 45 645 241 HOH HOH . BA 15 HOH B 46 646 242 HOH HOH . BA 15 HOH B 47 647 243 HOH HOH . BA 15 HOH B 48 648 244 HOH HOH . BA 15 HOH B 49 649 245 HOH HOH . BA 15 HOH B 50 650 246 HOH HOH . BA 15 HOH B 51 651 249 HOH HOH . BA 15 HOH B 52 652 252 HOH HOH . BA 15 HOH B 53 653 276 HOH HOH . BA 15 HOH B 54 654 279 HOH HOH . BA 15 HOH B 55 655 280 HOH HOH . BA 15 HOH B 56 656 281 HOH HOH . BA 15 HOH B 57 657 283 HOH HOH . BA 15 HOH B 58 658 284 HOH HOH . BA 15 HOH B 59 659 304 HOH HOH . BA 15 HOH B 60 660 309 HOH HOH . BA 15 HOH B 61 661 310 HOH HOH . BA 15 HOH B 62 662 311 HOH HOH . BA 15 HOH B 63 663 320 HOH HOH . BA 15 HOH B 64 664 321 HOH HOH . BA 15 HOH B 65 665 327 HOH HOH . BA 15 HOH B 66 666 328 HOH HOH . BA 15 HOH B 67 667 332 HOH HOH . BA 15 HOH B 68 668 333 HOH HOH . BA 15 HOH B 69 669 334 HOH HOH . BA 15 HOH B 70 670 335 HOH HOH . CA 15 HOH C 1 601 2 HOH HOH . CA 15 HOH C 2 602 3 HOH HOH . CA 15 HOH C 3 603 5 HOH HOH . CA 15 HOH C 4 604 6 HOH HOH . CA 15 HOH C 5 605 7 HOH HOH . CA 15 HOH C 6 606 8 HOH HOH . CA 15 HOH C 7 607 9 HOH HOH . CA 15 HOH C 8 608 13 HOH HOH . CA 15 HOH C 9 609 14 HOH HOH . CA 15 HOH C 10 610 15 HOH HOH . CA 15 HOH C 11 611 16 HOH HOH . CA 15 HOH C 12 612 17 HOH HOH . CA 15 HOH C 13 613 19 HOH HOH . CA 15 HOH C 14 614 23 HOH HOH . CA 15 HOH C 15 615 24 HOH HOH . CA 15 HOH C 16 616 26 HOH HOH . CA 15 HOH C 17 617 31 HOH HOH . CA 15 HOH C 18 618 32 HOH HOH . CA 15 HOH C 19 619 33 HOH HOH . CA 15 HOH C 20 620 35 HOH HOH . CA 15 HOH C 21 621 38 HOH HOH . CA 15 HOH C 22 622 39 HOH HOH . CA 15 HOH C 23 623 41 HOH HOH . CA 15 HOH C 24 624 49 HOH HOH . CA 15 HOH C 25 625 51 HOH HOH . CA 15 HOH C 26 626 54 HOH HOH . CA 15 HOH C 27 627 56 HOH HOH . CA 15 HOH C 28 628 57 HOH HOH . CA 15 HOH C 29 629 60 HOH HOH . CA 15 HOH C 30 630 62 HOH HOH . CA 15 HOH C 31 631 67 HOH HOH . CA 15 HOH C 32 632 69 HOH HOH . CA 15 HOH C 33 633 71 HOH HOH . CA 15 HOH C 34 634 72 HOH HOH . CA 15 HOH C 35 635 73 HOH HOH . CA 15 HOH C 36 636 75 HOH HOH . CA 15 HOH C 37 637 77 HOH HOH . CA 15 HOH C 38 638 81 HOH HOH . CA 15 HOH C 39 639 83 HOH HOH . CA 15 HOH C 40 640 85 HOH HOH . CA 15 HOH C 41 641 86 HOH HOH . CA 15 HOH C 42 642 87 HOH HOH . CA 15 HOH C 43 643 88 HOH HOH . CA 15 HOH C 44 644 92 HOH HOH . CA 15 HOH C 45 645 93 HOH HOH . CA 15 HOH C 46 646 96 HOH HOH . CA 15 HOH C 47 647 98 HOH HOH . CA 15 HOH C 48 648 99 HOH HOH . CA 15 HOH C 49 649 102 HOH HOH . CA 15 HOH C 50 650 104 HOH HOH . CA 15 HOH C 51 651 108 HOH HOH . CA 15 HOH C 52 652 111 HOH HOH . CA 15 HOH C 53 653 112 HOH HOH . CA 15 HOH C 54 654 113 HOH HOH . CA 15 HOH C 55 655 114 HOH HOH . CA 15 HOH C 56 656 115 HOH HOH . CA 15 HOH C 57 657 117 HOH HOH . CA 15 HOH C 58 658 122 HOH HOH . CA 15 HOH C 59 659 126 HOH HOH . CA 15 HOH C 60 660 127 HOH HOH . CA 15 HOH C 61 661 128 HOH HOH . CA 15 HOH C 62 662 131 HOH HOH . CA 15 HOH C 63 663 134 HOH HOH . CA 15 HOH C 64 664 137 HOH HOH . CA 15 HOH C 65 665 139 HOH HOH . CA 15 HOH C 66 666 140 HOH HOH . CA 15 HOH C 67 667 145 HOH HOH . CA 15 HOH C 68 668 146 HOH HOH . CA 15 HOH C 69 669 147 HOH HOH . CA 15 HOH C 70 670 148 HOH HOH . CA 15 HOH C 71 671 149 HOH HOH . CA 15 HOH C 72 672 151 HOH HOH . CA 15 HOH C 73 673 152 HOH HOH . CA 15 HOH C 74 674 153 HOH HOH . CA 15 HOH C 75 675 154 HOH HOH . CA 15 HOH C 76 676 156 HOH HOH . CA 15 HOH C 77 677 157 HOH HOH . CA 15 HOH C 78 678 158 HOH HOH . CA 15 HOH C 79 679 162 HOH HOH . CA 15 HOH C 80 680 164 HOH HOH . CA 15 HOH C 81 681 165 HOH HOH . CA 15 HOH C 82 682 167 HOH HOH . CA 15 HOH C 83 683 168 HOH HOH . CA 15 HOH C 84 684 169 HOH HOH . CA 15 HOH C 85 685 172 HOH HOH . CA 15 HOH C 86 686 175 HOH HOH . CA 15 HOH C 87 687 177 HOH HOH . CA 15 HOH C 88 688 179 HOH HOH . CA 15 HOH C 89 689 184 HOH HOH . CA 15 HOH C 90 690 194 HOH HOH . CA 15 HOH C 91 691 196 HOH HOH . CA 15 HOH C 92 692 197 HOH HOH . CA 15 HOH C 93 693 198 HOH HOH . CA 15 HOH C 94 694 199 HOH HOH . CA 15 HOH C 95 695 206 HOH HOH . CA 15 HOH C 96 696 207 HOH HOH . CA 15 HOH C 97 697 214 HOH HOH . CA 15 HOH C 98 698 215 HOH HOH . CA 15 HOH C 99 699 216 HOH HOH . CA 15 HOH C 100 700 217 HOH HOH . CA 15 HOH C 101 701 218 HOH HOH . CA 15 HOH C 102 702 219 HOH HOH . CA 15 HOH C 103 703 220 HOH HOH . CA 15 HOH C 104 704 221 HOH HOH . CA 15 HOH C 105 705 222 HOH HOH . CA 15 HOH C 106 706 223 HOH HOH . CA 15 HOH C 107 707 224 HOH HOH . CA 15 HOH C 108 708 226 HOH HOH . CA 15 HOH C 109 709 270 HOH HOH . CA 15 HOH C 110 710 271 HOH HOH . CA 15 HOH C 111 711 272 HOH HOH . CA 15 HOH C 112 712 274 HOH HOH . CA 15 HOH C 113 713 275 HOH HOH . CA 15 HOH C 114 714 277 HOH HOH . CA 15 HOH C 115 715 278 HOH HOH . CA 15 HOH C 116 716 282 HOH HOH . CA 15 HOH C 117 717 292 HOH HOH . CA 15 HOH C 118 718 293 HOH HOH . CA 15 HOH C 119 719 294 HOH HOH . CA 15 HOH C 120 720 298 HOH HOH . CA 15 HOH C 121 721 300 HOH HOH . CA 15 HOH C 122 722 301 HOH HOH . CA 15 HOH C 123 723 302 HOH HOH . CA 15 HOH C 124 724 303 HOH HOH . CA 15 HOH C 125 725 305 HOH HOH . CA 15 HOH C 126 726 306 HOH HOH . CA 15 HOH C 127 727 307 HOH HOH . CA 15 HOH C 128 728 308 HOH HOH . CA 15 HOH C 129 729 312 HOH HOH . CA 15 HOH C 130 730 313 HOH HOH . CA 15 HOH C 131 731 314 HOH HOH . CA 15 HOH C 132 732 315 HOH HOH . CA 15 HOH C 133 733 316 HOH HOH . CA 15 HOH C 134 734 317 HOH HOH . CA 15 HOH C 135 735 318 HOH HOH . CA 15 HOH C 136 736 319 HOH HOH . CA 15 HOH C 137 737 322 HOH HOH . CA 15 HOH C 138 738 323 HOH HOH . CA 15 HOH C 139 739 324 HOH HOH . CA 15 HOH C 140 740 325 HOH HOH . CA 15 HOH C 141 741 326 HOH HOH . CA 15 HOH C 142 742 329 HOH HOH . CA 15 HOH C 143 743 330 HOH HOH . CA 15 HOH C 144 744 331 HOH HOH . DA 15 HOH D 1 701 20 HOH HOH . DA 15 HOH D 2 702 28 HOH HOH . DA 15 HOH D 3 703 47 HOH HOH . DA 15 HOH D 4 704 64 HOH HOH . DA 15 HOH D 5 705 66 HOH HOH . DA 15 HOH D 6 706 105 HOH HOH . DA 15 HOH D 7 707 135 HOH HOH . DA 15 HOH D 8 708 136 HOH HOH . DA 15 HOH D 9 709 138 HOH HOH . DA 15 HOH D 10 710 160 HOH HOH . DA 15 HOH D 11 711 173 HOH HOH . DA 15 HOH D 12 712 174 HOH HOH . DA 15 HOH D 13 713 176 HOH HOH . DA 15 HOH D 14 714 200 HOH HOH . DA 15 HOH D 15 715 227 HOH HOH . DA 15 HOH D 16 716 265 HOH HOH . DA 15 HOH D 17 717 268 HOH HOH . DA 15 HOH D 18 718 269 HOH HOH . DA 15 HOH D 19 719 273 HOH HOH . DA 15 HOH D 20 720 285 HOH HOH . DA 15 HOH D 21 721 289 HOH HOH . DA 15 HOH D 22 722 290 HOH HOH . DA 15 HOH D 23 723 291 HOH HOH . DA 15 HOH D 24 724 295 HOH HOH . DA 15 HOH D 25 725 297 HOH HOH . DA 15 HOH D 26 726 299 HOH HOH . EA 15 HOH E 1 801 82 HOH HOH . EA 15 HOH E 2 802 90 HOH HOH . EA 15 HOH E 3 803 95 HOH HOH . EA 15 HOH E 4 804 116 HOH HOH . EA 15 HOH E 5 805 121 HOH HOH . EA 15 HOH E 6 806 130 HOH HOH . EA 15 HOH E 7 807 166 HOH HOH . EA 15 HOH E 8 808 225 HOH HOH . EA 15 HOH E 9 809 229 HOH HOH . EA 15 HOH E 10 810 230 HOH HOH . EA 15 HOH E 11 811 231 HOH HOH . EA 15 HOH E 12 812 266 HOH HOH . EA 15 HOH E 13 813 267 HOH HOH . FA 15 HOH F 1 501 22 HOH HOH . FA 15 HOH F 2 502 48 HOH HOH . FA 15 HOH F 3 503 52 HOH HOH . FA 15 HOH F 4 504 55 HOH HOH . FA 15 HOH F 5 505 63 HOH HOH . FA 15 HOH F 6 506 94 HOH HOH . FA 15 HOH F 7 507 100 HOH HOH . FA 15 HOH F 8 508 118 HOH HOH . FA 15 HOH F 9 509 141 HOH HOH . FA 15 HOH F 10 510 171 HOH HOH . FA 15 HOH F 11 511 178 HOH HOH . FA 15 HOH F 12 512 237 HOH HOH . FA 15 HOH F 13 513 251 HOH HOH . FA 15 HOH F 14 514 286 HOH HOH . FA 15 HOH F 15 515 287 HOH HOH . FA 15 HOH F 16 516 288 HOH HOH . FA 15 HOH F 17 517 340 HOH HOH . FA 15 HOH F 18 518 341 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . M 11 18.952 49.303 16.171 1 22.96 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . M 11 18.638 50.245 15.035 1 18.01 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . M 11 19.294 50.081 17.419 1 34.85 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . M 11 20.137 48.451 15.787 1 32.77 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . M 11 17.691 48.339 16.437 1 43.68 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . M 11 16.393 48.802 17.273 1 25.29 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . M 11 15.162 48.755 16.402 1 33.52 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . M 11 16.55 50.184 17.861 1 23.81 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . M 11 16.294 47.69 18.431 1 18.58 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . M 11 15.164 46.825 18.506 1 23.14 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . M 11 14.6 46.835 19.919 1 30.64 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . M 11 14.188 48.171 20.205 1 28.5 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . M 11 13.365 45.958 20.015 1 36.61 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . M 11 13.345 45.282 21.276 1 34.69 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . M 11 12.199 46.919 19.941 1 32.1 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . M 11 11.133 46.488 20.792 1 43.48 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . M 11 12.779 48.234 20.427 1 29.77 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . M 11 12.225 49.391 19.685 1 29.32 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . M 11 12.414 49.673 18.383 1 22.06 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . M 11 11.772 50.818 18.036 1 30.52 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . M 11 11.163 51.291 19.142 1 30.74 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . M 11 10.319 52.458 19.489 1 26.91 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . M 11 10.013 53.308 18.627 1 27.88 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . M 11 9.895 52.576 20.754 1 24.71 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . M 11 10.207 51.676 21.706 1 27.91 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . M 11 9.737 51.864 22.963 1 24.13 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . M 11 10.975 50.584 21.459 1 22.94 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . M 11 11.47 50.347 20.223 1 27.86 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 28 #