data_4O2L # _model_server_result.job_id Z3heDPf4AJ_5XNphNXkuBw _model_server_result.datetime_utc '2024-11-19 23:09:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o2l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 4O2L # _exptl.entry_id 4O2L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O2L _cell.length_a 57.557 _cell.length_b 70.248 _cell.length_c 79.733 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O2L _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 22 A SER 20 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.867 ? metalc ? metalc2 A OD1 ASP 62 A ASP 60 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.976 ? metalc ? metalc3 C O1B GTP . A GTP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc4 C O3G GTP . A GTP 201 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? metalc ? metalc5 D MG MG . A MG 202 1_555 I O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.854 ? metalc ? metalc6 D MG MG . A MG 202 1_555 I O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? metalc ? metalc7 B OG SER 22 B SER 20 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? metalc ? metalc8 B OG1 THR 40 B THR 38 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc9 E O1A GTP . B GTP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc10 E O1B GTP . B GTP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc11 E O3G GTP . B GTP 201 1_555 F MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.874 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4O2L _atom_sites.fract_transf_matrix[1][1] 0.017374 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014235 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GTP A 1 201 201 GTP GTP . D 3 MG A 1 202 202 MG MG . E 2 GTP B 1 201 201 GTP GTP . F 3 MG B 1 202 202 MG MG . G 4 TRS B 1 203 203 TRS TRS . H 5 ACT B 1 204 204 ACT ACT . I 6 HOH A 1 301 301 HOH HOH . I 6 HOH A 2 302 302 HOH HOH . I 6 HOH A 3 303 303 HOH HOH . I 6 HOH A 4 304 304 HOH HOH . I 6 HOH A 5 305 305 HOH HOH . I 6 HOH A 6 306 306 HOH HOH . I 6 HOH A 7 307 307 HOH HOH . I 6 HOH A 8 308 308 HOH HOH . I 6 HOH A 9 309 309 HOH HOH . I 6 HOH A 10 310 310 HOH HOH . I 6 HOH A 11 311 311 HOH HOH . I 6 HOH A 12 312 312 HOH HOH . I 6 HOH A 13 313 313 HOH HOH . I 6 HOH A 14 314 314 HOH HOH . I 6 HOH A 15 315 315 HOH HOH . I 6 HOH A 16 316 316 HOH HOH . I 6 HOH A 17 317 317 HOH HOH . I 6 HOH A 18 318 318 HOH HOH . I 6 HOH A 19 319 319 HOH HOH . I 6 HOH A 20 320 320 HOH HOH . I 6 HOH A 21 321 321 HOH HOH . I 6 HOH A 22 322 322 HOH HOH . I 6 HOH A 23 323 323 HOH HOH . I 6 HOH A 24 324 324 HOH HOH . I 6 HOH A 25 325 325 HOH HOH . I 6 HOH A 26 326 326 HOH HOH . I 6 HOH A 27 327 327 HOH HOH . I 6 HOH A 28 328 328 HOH HOH . I 6 HOH A 29 329 329 HOH HOH . I 6 HOH A 30 330 330 HOH HOH . I 6 HOH A 31 331 331 HOH HOH . I 6 HOH A 32 332 332 HOH HOH . I 6 HOH A 33 333 333 HOH HOH . I 6 HOH A 34 334 334 HOH HOH . I 6 HOH A 35 335 335 HOH HOH . I 6 HOH A 36 336 336 HOH HOH . I 6 HOH A 37 337 337 HOH HOH . I 6 HOH A 38 338 338 HOH HOH . I 6 HOH A 39 339 339 HOH HOH . I 6 HOH A 40 340 340 HOH HOH . I 6 HOH A 41 341 341 HOH HOH . I 6 HOH A 42 342 342 HOH HOH . I 6 HOH A 43 343 343 HOH HOH . I 6 HOH A 44 344 344 HOH HOH . I 6 HOH A 45 345 345 HOH HOH . I 6 HOH A 46 346 346 HOH HOH . I 6 HOH A 47 347 347 HOH HOH . I 6 HOH A 48 348 348 HOH HOH . I 6 HOH A 49 349 349 HOH HOH . I 6 HOH A 50 350 350 HOH HOH . I 6 HOH A 51 351 351 HOH HOH . I 6 HOH A 52 352 352 HOH HOH . I 6 HOH A 53 353 353 HOH HOH . I 6 HOH A 54 354 354 HOH HOH . I 6 HOH A 55 355 355 HOH HOH . I 6 HOH A 56 356 356 HOH HOH . I 6 HOH A 57 357 357 HOH HOH . I 6 HOH A 58 358 358 HOH HOH . I 6 HOH A 59 359 359 HOH HOH . I 6 HOH A 60 360 360 HOH HOH . I 6 HOH A 61 361 361 HOH HOH . J 6 HOH B 1 301 301 HOH HOH . J 6 HOH B 2 302 302 HOH HOH . J 6 HOH B 3 303 303 HOH HOH . J 6 HOH B 4 304 304 HOH HOH . J 6 HOH B 5 305 305 HOH HOH . J 6 HOH B 6 306 306 HOH HOH . J 6 HOH B 7 307 307 HOH HOH . J 6 HOH B 8 308 308 HOH HOH . J 6 HOH B 9 309 309 HOH HOH . J 6 HOH B 10 310 310 HOH HOH . J 6 HOH B 11 311 311 HOH HOH . J 6 HOH B 12 312 312 HOH HOH . J 6 HOH B 13 313 313 HOH HOH . J 6 HOH B 14 314 314 HOH HOH . J 6 HOH B 15 315 315 HOH HOH . J 6 HOH B 16 316 316 HOH HOH . J 6 HOH B 17 317 317 HOH HOH . J 6 HOH B 18 318 318 HOH HOH . J 6 HOH B 19 319 319 HOH HOH . J 6 HOH B 20 320 320 HOH HOH . J 6 HOH B 21 321 321 HOH HOH . J 6 HOH B 22 322 322 HOH HOH . J 6 HOH B 23 323 323 HOH HOH . J 6 HOH B 24 324 324 HOH HOH . J 6 HOH B 25 325 325 HOH HOH . J 6 HOH B 26 326 326 HOH HOH . J 6 HOH B 27 327 327 HOH HOH . J 6 HOH B 28 328 328 HOH HOH . J 6 HOH B 29 329 329 HOH HOH . J 6 HOH B 30 330 330 HOH HOH . J 6 HOH B 31 331 331 HOH HOH . J 6 HOH B 32 332 332 HOH HOH . J 6 HOH B 33 333 333 HOH HOH . J 6 HOH B 34 334 335 HOH HOH . J 6 HOH B 35 335 336 HOH HOH . J 6 HOH B 36 336 337 HOH HOH . J 6 HOH B 37 337 338 HOH HOH . J 6 HOH B 38 338 339 HOH HOH . J 6 HOH B 39 339 340 HOH HOH . J 6 HOH B 40 340 341 HOH HOH . J 6 HOH B 41 341 342 HOH HOH . J 6 HOH B 42 342 343 HOH HOH . J 6 HOH B 43 343 344 HOH HOH . J 6 HOH B 44 344 345 HOH HOH . J 6 HOH B 45 345 346 HOH HOH . J 6 HOH B 46 346 347 HOH HOH . J 6 HOH B 47 347 348 HOH HOH . J 6 HOH B 48 348 349 HOH HOH . J 6 HOH B 49 349 350 HOH HOH . J 6 HOH B 50 350 351 HOH HOH . J 6 HOH B 51 351 352 HOH HOH . J 6 HOH B 52 352 353 HOH HOH . J 6 HOH B 53 353 354 HOH HOH . J 6 HOH B 54 354 355 HOH HOH . J 6 HOH B 55 355 356 HOH HOH . J 6 HOH B 56 356 357 HOH HOH . J 6 HOH B 57 357 358 HOH HOH . J 6 HOH B 58 358 359 HOH HOH . J 6 HOH B 59 359 360 HOH HOH . J 6 HOH B 60 360 361 HOH HOH . J 6 HOH B 61 361 362 HOH HOH . J 6 HOH B 62 362 363 HOH HOH . J 6 HOH B 63 363 364 HOH HOH . J 6 HOH B 64 364 365 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 31.612 _atom_site.Cartn_y 26.327 _atom_site.Cartn_z 4.421 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #