data_4O35 # _model_server_result.job_id KYbnagZ9JczyyJmgBJFOIQ _model_server_result.datetime_utc '2024-11-01 12:21:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o35 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":206}' # _entry.id 4O35 # _exptl.entry_id 4O35 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.105 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4-DIETHYLENE DIOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4O35 _cell.length_a 89.155 _cell.length_b 89.155 _cell.length_c 108.622 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O35 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 99 A HIS 96 1_555 B FE HEM . A HEM 201 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc2 A NE2 HIS 99 A HIS 96 1_555 B FE HEM . A HEM 201 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.382 ? # _chem_comp.formula 'C4 H8 O2' _chem_comp.formula_weight 88.105 _chem_comp.id DIO _chem_comp.mon_nstd_flag . _chem_comp.name '1,4-DIETHYLENE DIOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C1' DIO sing 84 n n C1 O1 DIO sing 85 n n C1 H11 DIO sing 86 n n C1 H12 DIO sing 87 n n C2 C2' DIO sing 88 n n C2 O1 DIO sing 89 n n C2 H21 DIO sing 90 n n C2 H22 DIO sing 91 n n C1' O1' DIO sing 92 n n C1' "H1'1" DIO sing 93 n n C1' "H1'2" DIO sing 94 n n C2' O1' DIO sing 95 n n C2' "H2'1" DIO sing 96 n n C2' "H2'2" DIO sing 97 n n # _atom_sites.entry_id 4O35 _atom_sites.fract_transf_matrix[1][1] 0.011216 _atom_sites.fract_transf_matrix[1][2] 0.006476 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012952 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 1149 HEM HEM . C 3 CMO A 1 202 1150 CMO CMO . D 4 SO4 A 1 203 1 SO4 SO4 . E 5 DIO A 1 204 204 DIO DIO . F 5 DIO A 1 205 205 DIO DIO . G 5 DIO A 1 206 209 DIO DIO . H 6 HOH A 1 301 1 HOH HOH . H 6 HOH A 2 302 2 HOH HOH . H 6 HOH A 3 303 3 HOH HOH . H 6 HOH A 4 304 4 HOH HOH . H 6 HOH A 5 305 5 HOH HOH . H 6 HOH A 6 306 6 HOH HOH . H 6 HOH A 7 307 7 HOH HOH . H 6 HOH A 8 308 9 HOH HOH . H 6 HOH A 9 309 10 HOH HOH . H 6 HOH A 10 310 11 HOH HOH . H 6 HOH A 11 311 12 HOH HOH . H 6 HOH A 12 312 13 HOH HOH . H 6 HOH A 13 313 14 HOH HOH . H 6 HOH A 14 314 15 HOH HOH . H 6 HOH A 15 315 16 HOH HOH . H 6 HOH A 16 316 17 HOH HOH . H 6 HOH A 17 317 18 HOH HOH . H 6 HOH A 18 318 20 HOH HOH . H 6 HOH A 19 319 21 HOH HOH . H 6 HOH A 20 320 22 HOH HOH . H 6 HOH A 21 321 25 HOH HOH . H 6 HOH A 22 322 26 HOH HOH . H 6 HOH A 23 323 27 HOH HOH . H 6 HOH A 24 324 28 HOH HOH . H 6 HOH A 25 325 29 HOH HOH . H 6 HOH A 26 326 30 HOH HOH . H 6 HOH A 27 327 32 HOH HOH . H 6 HOH A 28 328 33 HOH HOH . H 6 HOH A 29 329 34 HOH HOH . H 6 HOH A 30 330 35 HOH HOH . H 6 HOH A 31 331 37 HOH HOH . H 6 HOH A 32 332 39 HOH HOH . H 6 HOH A 33 333 40 HOH HOH . H 6 HOH A 34 334 41 HOH HOH . H 6 HOH A 35 335 42 HOH HOH . H 6 HOH A 36 336 43 HOH HOH . H 6 HOH A 37 337 44 HOH HOH . H 6 HOH A 38 338 45 HOH HOH . H 6 HOH A 39 339 47 HOH HOH . H 6 HOH A 40 340 50 HOH HOH . H 6 HOH A 41 341 51 HOH HOH . H 6 HOH A 42 342 52 HOH HOH . H 6 HOH A 43 343 53 HOH HOH . H 6 HOH A 44 344 54 HOH HOH . H 6 HOH A 45 345 55 HOH HOH . H 6 HOH A 46 346 56 HOH HOH . H 6 HOH A 47 347 58 HOH HOH . H 6 HOH A 48 348 59 HOH HOH . H 6 HOH A 49 349 60 HOH HOH . H 6 HOH A 50 350 62 HOH HOH . H 6 HOH A 51 351 64 HOH HOH . H 6 HOH A 52 352 65 HOH HOH . H 6 HOH A 53 353 67 HOH HOH . H 6 HOH A 54 354 68 HOH HOH . H 6 HOH A 55 355 70 HOH HOH . H 6 HOH A 56 356 71 HOH HOH . H 6 HOH A 57 357 72 HOH HOH . H 6 HOH A 58 358 73 HOH HOH . H 6 HOH A 59 359 75 HOH HOH . H 6 HOH A 60 360 76 HOH HOH . H 6 HOH A 61 361 77 HOH HOH . H 6 HOH A 62 362 78 HOH HOH . H 6 HOH A 63 363 79 HOH HOH . H 6 HOH A 64 364 80 HOH HOH . H 6 HOH A 65 365 81 HOH HOH . H 6 HOH A 66 366 82 HOH HOH . H 6 HOH A 67 367 84 HOH HOH . H 6 HOH A 68 368 85 HOH HOH . H 6 HOH A 69 369 86 HOH HOH . H 6 HOH A 70 370 87 HOH HOH . H 6 HOH A 71 371 88 HOH HOH . H 6 HOH A 72 372 89 HOH HOH . H 6 HOH A 73 373 91 HOH HOH . H 6 HOH A 74 374 92 HOH HOH . H 6 HOH A 75 375 93 HOH HOH . H 6 HOH A 76 376 94 HOH HOH . H 6 HOH A 77 377 95 HOH HOH . H 6 HOH A 78 378 98 HOH HOH . H 6 HOH A 79 379 99 HOH HOH . H 6 HOH A 80 380 100 HOH HOH . H 6 HOH A 81 381 101 HOH HOH . H 6 HOH A 82 382 102 HOH HOH . H 6 HOH A 83 383 103 HOH HOH . H 6 HOH A 84 384 104 HOH HOH . H 6 HOH A 85 385 105 HOH HOH . H 6 HOH A 86 386 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DIO . . . G 5 26.821 3.495 19.121 0.34 16.71 ? C1 DIO 206 A 1 HETATM 2 C C2 DIO . . . G 5 25.813 5.054 17.795 0.34 19.18 ? C2 DIO 206 A 1 HETATM 3 C C1' DIO . . . G 5 28.107 4.292 19.157 0.34 13.89 ? C1' DIO 206 A 1 HETATM 4 C C2' DIO . . . G 5 27.074 5.878 17.65 0.34 20.81 ? C2' DIO 206 A 1 HETATM 5 O O1 DIO . . . G 5 26.091 3.693 17.944 0.34 26.38 ? O1 DIO 206 A 1 HETATM 6 O O1' DIO . . . G 5 28.247 5.293 18.167 0.34 25.74 ? O1' DIO 206 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 6 #