data_4O3C # _model_server_result.job_id F2cSPhlAEQltJgBlm1spyA _model_server_result.datetime_utc '2024-11-13 13:36:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4O3C # _exptl.entry_id 4O3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 133.103 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ASPARTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O3C _cell.length_a 63.997 _cell.length_b 87.877 _cell.length_c 47.042 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 206 A CYS 206 1_555 A SG CYS 261 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A OD1 ASN 242 A ASN 242 1_555 F LI LI . A LI 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc2 F LI LI . A LI 305 1_555 K O HOH . A HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc3 F LI LI . A LI 305 1_555 K O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? # _chem_comp.formula 'C4 H7 N O4' _chem_comp.formula_weight 133.103 _chem_comp.id ASP _chem_comp.mon_nstd_flag y _chem_comp.name 'ASPARTIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ASP sing 61 n n N H ASP sing 62 n n N H2 ASP sing 63 n n CA C ASP sing 64 n n CA CB ASP sing 65 n n CA HA ASP sing 66 n n C O ASP doub 67 n n C OXT ASP sing 68 n n CB CG ASP sing 69 n n CB HB2 ASP sing 70 n n CB HB3 ASP sing 71 n n CG OD1 ASP doub 72 n n CG OD2 ASP sing 73 n n OD2 HD2 ASP sing 74 n n OXT HXT ASP sing 75 n n # _atom_sites.entry_id 4O3C _atom_sites.fract_transf_matrix[1][1] 0.015626 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01138 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021258 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ASP A 1 301 1 ASP ASP . C 3 CL A 1 302 1 CL CL . D 4 GOL A 1 303 1 GOL GOL . E 5 ACT A 1 304 1 ACT ACT . F 6 LI A 1 305 1 LI LI . G 7 SO4 A 1 306 1 SO4 SO4 . H 7 SO4 A 1 307 2 SO4 SO4 . I 7 SO4 A 1 308 3 SO4 SO4 . J 7 SO4 A 1 309 4 SO4 SO4 . K 8 HOH A 1 401 4 HOH HOH . K 8 HOH A 2 402 5 HOH HOH . K 8 HOH A 3 403 6 HOH HOH . K 8 HOH A 4 404 7 HOH HOH . K 8 HOH A 5 405 9 HOH HOH . K 8 HOH A 6 406 10 HOH HOH . K 8 HOH A 7 407 11 HOH HOH . K 8 HOH A 8 408 12 HOH HOH . K 8 HOH A 9 409 14 HOH HOH . K 8 HOH A 10 410 15 HOH HOH . K 8 HOH A 11 411 16 HOH HOH . K 8 HOH A 12 412 17 HOH HOH . K 8 HOH A 13 413 19 HOH HOH . K 8 HOH A 14 414 20 HOH HOH . K 8 HOH A 15 415 21 HOH HOH . K 8 HOH A 16 416 22 HOH HOH . K 8 HOH A 17 417 23 HOH HOH . K 8 HOH A 18 418 24 HOH HOH . K 8 HOH A 19 419 25 HOH HOH . K 8 HOH A 20 420 26 HOH HOH . K 8 HOH A 21 421 27 HOH HOH . K 8 HOH A 22 422 28 HOH HOH . K 8 HOH A 23 423 29 HOH HOH . K 8 HOH A 24 424 30 HOH HOH . K 8 HOH A 25 425 31 HOH HOH . K 8 HOH A 26 426 32 HOH HOH . K 8 HOH A 27 427 33 HOH HOH . K 8 HOH A 28 428 34 HOH HOH . K 8 HOH A 29 429 35 HOH HOH . K 8 HOH A 30 430 37 HOH HOH . K 8 HOH A 31 431 38 HOH HOH . K 8 HOH A 32 432 39 HOH HOH . K 8 HOH A 33 433 40 HOH HOH . K 8 HOH A 34 434 41 HOH HOH . K 8 HOH A 35 435 43 HOH HOH . K 8 HOH A 36 436 44 HOH HOH . K 8 HOH A 37 437 45 HOH HOH . K 8 HOH A 38 438 46 HOH HOH . K 8 HOH A 39 439 47 HOH HOH . K 8 HOH A 40 440 48 HOH HOH . K 8 HOH A 41 441 49 HOH HOH . K 8 HOH A 42 442 50 HOH HOH . K 8 HOH A 43 443 51 HOH HOH . K 8 HOH A 44 444 52 HOH HOH . K 8 HOH A 45 445 54 HOH HOH . K 8 HOH A 46 446 55 HOH HOH . K 8 HOH A 47 447 56 HOH HOH . K 8 HOH A 48 448 57 HOH HOH . K 8 HOH A 49 449 58 HOH HOH . K 8 HOH A 50 450 59 HOH HOH . K 8 HOH A 51 451 60 HOH HOH . K 8 HOH A 52 452 61 HOH HOH . K 8 HOH A 53 453 62 HOH HOH . K 8 HOH A 54 454 63 HOH HOH . K 8 HOH A 55 455 64 HOH HOH . K 8 HOH A 56 456 65 HOH HOH . K 8 HOH A 57 457 66 HOH HOH . K 8 HOH A 58 458 67 HOH HOH . K 8 HOH A 59 459 68 HOH HOH . K 8 HOH A 60 460 69 HOH HOH . K 8 HOH A 61 461 70 HOH HOH . K 8 HOH A 62 462 71 HOH HOH . K 8 HOH A 63 463 72 HOH HOH . K 8 HOH A 64 464 73 HOH HOH . K 8 HOH A 65 465 74 HOH HOH . K 8 HOH A 66 466 75 HOH HOH . K 8 HOH A 67 467 77 HOH HOH . K 8 HOH A 68 468 78 HOH HOH . K 8 HOH A 69 469 79 HOH HOH . K 8 HOH A 70 470 80 HOH HOH . K 8 HOH A 71 471 81 HOH HOH . K 8 HOH A 72 472 82 HOH HOH . K 8 HOH A 73 473 83 HOH HOH . K 8 HOH A 74 474 84 HOH HOH . K 8 HOH A 75 475 86 HOH HOH . K 8 HOH A 76 476 87 HOH HOH . K 8 HOH A 77 477 88 HOH HOH . K 8 HOH A 78 478 89 HOH HOH . K 8 HOH A 79 479 90 HOH HOH . K 8 HOH A 80 480 91 HOH HOH . K 8 HOH A 81 481 92 HOH HOH . K 8 HOH A 82 482 93 HOH HOH . K 8 HOH A 83 483 95 HOH HOH . K 8 HOH A 84 484 96 HOH HOH . K 8 HOH A 85 485 97 HOH HOH . K 8 HOH A 86 486 98 HOH HOH . K 8 HOH A 87 487 99 HOH HOH . K 8 HOH A 88 488 100 HOH HOH . K 8 HOH A 89 489 101 HOH HOH . K 8 HOH A 90 490 102 HOH HOH . K 8 HOH A 91 491 103 HOH HOH . K 8 HOH A 92 492 104 HOH HOH . K 8 HOH A 93 493 105 HOH HOH . K 8 HOH A 94 494 106 HOH HOH . K 8 HOH A 95 495 107 HOH HOH . K 8 HOH A 96 496 108 HOH HOH . K 8 HOH A 97 497 109 HOH HOH . K 8 HOH A 98 498 110 HOH HOH . K 8 HOH A 99 499 111 HOH HOH . K 8 HOH A 100 500 112 HOH HOH . K 8 HOH A 101 501 114 HOH HOH . K 8 HOH A 102 502 115 HOH HOH . K 8 HOH A 103 503 116 HOH HOH . K 8 HOH A 104 504 117 HOH HOH . K 8 HOH A 105 505 118 HOH HOH . K 8 HOH A 106 506 119 HOH HOH . K 8 HOH A 107 507 120 HOH HOH . K 8 HOH A 108 508 121 HOH HOH . K 8 HOH A 109 509 124 HOH HOH . K 8 HOH A 110 510 125 HOH HOH . K 8 HOH A 111 511 126 HOH HOH . K 8 HOH A 112 512 128 HOH HOH . K 8 HOH A 113 513 129 HOH HOH . K 8 HOH A 114 514 130 HOH HOH . K 8 HOH A 115 515 131 HOH HOH . K 8 HOH A 116 516 132 HOH HOH . K 8 HOH A 117 517 133 HOH HOH . K 8 HOH A 118 518 134 HOH HOH . K 8 HOH A 119 519 137 HOH HOH . K 8 HOH A 120 520 139 HOH HOH . K 8 HOH A 121 521 140 HOH HOH . K 8 HOH A 122 522 142 HOH HOH . K 8 HOH A 123 523 143 HOH HOH . K 8 HOH A 124 524 146 HOH HOH . K 8 HOH A 125 525 147 HOH HOH . K 8 HOH A 126 526 148 HOH HOH . K 8 HOH A 127 527 150 HOH HOH . K 8 HOH A 128 528 151 HOH HOH . K 8 HOH A 129 529 152 HOH HOH . K 8 HOH A 130 530 153 HOH HOH . K 8 HOH A 131 531 154 HOH HOH . K 8 HOH A 132 532 155 HOH HOH . K 8 HOH A 133 533 156 HOH HOH . K 8 HOH A 134 534 157 HOH HOH . K 8 HOH A 135 535 158 HOH HOH . K 8 HOH A 136 536 159 HOH HOH . K 8 HOH A 137 537 160 HOH HOH . K 8 HOH A 138 538 161 HOH HOH . K 8 HOH A 139 539 162 HOH HOH . K 8 HOH A 140 540 163 HOH HOH . K 8 HOH A 141 541 164 HOH HOH . K 8 HOH A 142 542 167 HOH HOH . K 8 HOH A 143 543 169 HOH HOH . K 8 HOH A 144 544 170 HOH HOH . K 8 HOH A 145 545 171 HOH HOH . K 8 HOH A 146 546 172 HOH HOH . K 8 HOH A 147 547 173 HOH HOH . K 8 HOH A 148 548 174 HOH HOH . K 8 HOH A 149 549 175 HOH HOH . K 8 HOH A 150 550 176 HOH HOH . K 8 HOH A 151 551 177 HOH HOH . K 8 HOH A 152 552 178 HOH HOH . K 8 HOH A 153 553 179 HOH HOH . K 8 HOH A 154 554 182 HOH HOH . K 8 HOH A 155 555 183 HOH HOH . K 8 HOH A 156 556 185 HOH HOH . K 8 HOH A 157 557 186 HOH HOH . K 8 HOH A 158 558 188 HOH HOH . K 8 HOH A 159 559 189 HOH HOH . K 8 HOH A 160 560 190 HOH HOH . K 8 HOH A 161 561 191 HOH HOH . K 8 HOH A 162 562 192 HOH HOH . K 8 HOH A 163 563 198 HOH HOH . K 8 HOH A 164 564 201 HOH HOH . K 8 HOH A 165 565 206 HOH HOH . K 8 HOH A 166 566 209 HOH HOH . K 8 HOH A 167 567 211 HOH HOH . K 8 HOH A 168 568 213 HOH HOH . K 8 HOH A 169 569 214 HOH HOH . K 8 HOH A 170 570 216 HOH HOH . K 8 HOH A 171 571 217 HOH HOH . K 8 HOH A 172 572 218 HOH HOH . K 8 HOH A 173 573 222 HOH HOH . K 8 HOH A 174 574 224 HOH HOH . K 8 HOH A 175 575 228 HOH HOH . K 8 HOH A 176 576 235 HOH HOH . K 8 HOH A 177 577 236 HOH HOH . K 8 HOH A 178 578 241 HOH HOH . K 8 HOH A 179 579 245 HOH HOH . K 8 HOH A 180 580 247 HOH HOH . K 8 HOH A 181 581 248 HOH HOH . K 8 HOH A 182 582 250 HOH HOH . K 8 HOH A 183 583 251 HOH HOH . K 8 HOH A 184 584 252 HOH HOH . K 8 HOH A 185 585 253 HOH HOH . K 8 HOH A 186 586 255 HOH HOH . K 8 HOH A 187 587 261 HOH HOH . K 8 HOH A 188 588 262 HOH HOH . K 8 HOH A 189 589 263 HOH HOH . K 8 HOH A 190 590 267 HOH HOH . K 8 HOH A 191 591 269 HOH HOH . K 8 HOH A 192 592 277 HOH HOH . K 8 HOH A 193 593 278 HOH HOH . K 8 HOH A 194 594 285 HOH HOH . K 8 HOH A 195 595 287 HOH HOH . K 8 HOH A 196 596 289 HOH HOH . K 8 HOH A 197 597 298 HOH HOH . K 8 HOH A 198 598 299 HOH HOH . K 8 HOH A 199 599 313 HOH HOH . K 8 HOH A 200 600 315 HOH HOH . K 8 HOH A 201 601 343 HOH HOH . K 8 HOH A 202 602 346 HOH HOH . K 8 HOH A 203 603 352 HOH HOH . K 8 HOH A 204 604 353 HOH HOH . K 8 HOH A 205 605 355 HOH HOH . K 8 HOH A 206 606 356 HOH HOH . K 8 HOH A 207 607 357 HOH HOH . K 8 HOH A 208 608 358 HOH HOH . K 8 HOH A 209 609 360 HOH HOH . K 8 HOH A 210 610 363 HOH HOH . K 8 HOH A 211 611 366 HOH HOH . K 8 HOH A 212 612 367 HOH HOH . K 8 HOH A 213 613 369 HOH HOH . K 8 HOH A 214 614 370 HOH HOH . K 8 HOH A 215 615 371 HOH HOH . K 8 HOH A 216 616 374 HOH HOH . K 8 HOH A 217 617 375 HOH HOH . K 8 HOH A 218 618 376 HOH HOH . K 8 HOH A 219 619 378 HOH HOH . K 8 HOH A 220 620 379 HOH HOH . K 8 HOH A 221 621 380 HOH HOH . K 8 HOH A 222 622 381 HOH HOH . K 8 HOH A 223 623 382 HOH HOH . K 8 HOH A 224 624 383 HOH HOH . K 8 HOH A 225 625 384 HOH HOH . K 8 HOH A 226 626 385 HOH HOH . K 8 HOH A 227 627 386 HOH HOH . K 8 HOH A 228 628 387 HOH HOH . K 8 HOH A 229 629 388 HOH HOH . K 8 HOH A 230 630 389 HOH HOH . K 8 HOH A 231 631 390 HOH HOH . K 8 HOH A 232 632 391 HOH HOH . K 8 HOH A 233 633 392 HOH HOH . K 8 HOH A 234 634 393 HOH HOH . K 8 HOH A 235 635 394 HOH HOH . K 8 HOH A 236 636 395 HOH HOH . K 8 HOH A 237 637 396 HOH HOH . K 8 HOH A 238 638 397 HOH HOH . K 8 HOH A 239 639 398 HOH HOH . K 8 HOH A 240 640 399 HOH HOH . K 8 HOH A 241 641 400 HOH HOH . K 8 HOH A 242 642 401 HOH HOH . K 8 HOH A 243 643 402 HOH HOH . K 8 HOH A 244 644 403 HOH HOH . K 8 HOH A 245 645 404 HOH HOH . K 8 HOH A 246 646 406 HOH HOH . K 8 HOH A 247 647 407 HOH HOH . K 8 HOH A 248 648 409 HOH HOH . K 8 HOH A 249 649 410 HOH HOH . K 8 HOH A 250 650 411 HOH HOH . K 8 HOH A 251 651 412 HOH HOH . K 8 HOH A 252 652 413 HOH HOH . K 8 HOH A 253 653 414 HOH HOH . K 8 HOH A 254 654 415 HOH HOH . K 8 HOH A 255 655 416 HOH HOH . K 8 HOH A 256 656 417 HOH HOH . K 8 HOH A 257 657 418 HOH HOH . K 8 HOH A 258 658 419 HOH HOH . K 8 HOH A 259 659 420 HOH HOH . K 8 HOH A 260 660 421 HOH HOH . K 8 HOH A 261 661 422 HOH HOH . K 8 HOH A 262 662 423 HOH HOH . K 8 HOH A 263 663 424 HOH HOH . K 8 HOH A 264 664 425 HOH HOH . K 8 HOH A 265 665 426 HOH HOH . K 8 HOH A 266 666 427 HOH HOH . K 8 HOH A 267 667 428 HOH HOH . K 8 HOH A 268 668 429 HOH HOH . K 8 HOH A 269 669 430 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ASP . . . B 2 -13.605 2.642 -16.25 1 11.33 ? N ASP 301 A 1 HETATM 2 C CA ASP . . . B 2 -14.539 1.511 -16.446 1 9.2 ? CA ASP 301 A 1 HETATM 3 C C ASP . . . B 2 -14.796 1.287 -17.919 1 9.72 ? C ASP 301 A 1 HETATM 4 O O ASP . . . B 2 -13.999 1.778 -18.735 1 9.29 ? O ASP 301 A 1 HETATM 5 C CB ASP . . . B 2 -15.851 1.707 -15.669 1 12.74 ? CB ASP 301 A 1 HETATM 6 C CG ASP . . . B 2 -16.174 0.487 -14.788 1 15.04 ? CG ASP 301 A 1 HETATM 7 O OD1 ASP . . . B 2 -16.823 -0.441 -15.297 1 15.43 ? OD1 ASP 301 A 1 HETATM 8 O OD2 ASP . . . B 2 -15.742 0.438 -13.605 1 17.31 ? OD2 ASP 301 A 1 HETATM 9 O OXT ASP . . . B 2 -15.776 0.606 -18.297 1 10.11 ? OXT ASP 301 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #