data_4O4I # _model_server_result.job_id WCR9HFm2K3_kCfSw4c-VYg _model_server_result.datetime_utc '2024-11-28 11:20:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":501}' # _entry.id 4O4I # _exptl.entry_id 4O4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O4I _cell.length_a 105.2 _cell.length_b 158.03 _cell.length_c 180.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 J N N ? 8 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc8 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc9 G O2G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc10 H MG MG . A MG 502 1_555 Y O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc11 H MG MG . A MG 502 1_555 Y O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc12 H MG MG . A MG 502 1_555 Y O HOH . A HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc13 B OE1 GLN 11 B GLN 11 1_555 M MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc14 B OE2 GLU 111 B GLU 113 1_555 O CA CA . B CA 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc15 J O1A GDP . B GDP 501 1_555 M MG MG . B MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc16 K MG MG . B MG 502 1_555 Z O HOH . B HOH 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc17 M MG MG . B MG 504 1_555 Z O HOH . B HOH 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc18 M MG MG . B MG 504 1_555 AA O HOH . C HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc19 C OD1 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc20 C OD2 ASP 39 C ASP 39 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.875 ? metalc ? metalc21 C O THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? metalc ? metalc22 C OG1 THR 41 C THR 41 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.865 ? metalc ? metalc23 C O GLY 44 C GLY 44 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc24 C OE1 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.805 ? metalc ? metalc25 C OE2 GLU 55 C GLU 55 1_555 S CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc26 Q O1G GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc27 Q O1B GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc28 R MG MG . C MG 502 1_555 AA O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc29 R MG MG . C MG 502 1_555 AA O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc30 R MG MG . C MG 502 1_555 AA O HOH . C HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc31 D OE1 GLN 11 D GLN 11 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.968 ? metalc ? metalc32 T O1B GDP . D GDP 501 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.938 ? metalc ? metalc33 F OD2 ASP 318 F ASP 318 1_555 X MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc34 W O2G ACP . F ACP 500 1_555 X MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc35 W O1B ACP . F ACP 500 1_555 X MG MG . F MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 209 n n PB O2B GDP sing 210 n n PB O3B GDP sing 211 n n PB O3A GDP sing 212 n n O2B HOB2 GDP sing 213 n n O3B HOB3 GDP sing 214 n n O3A PA GDP sing 215 n n PA O1A GDP doub 216 n n PA O2A GDP sing 217 n n PA O5' GDP sing 218 n n O2A HOA2 GDP sing 219 n n O5' C5' GDP sing 220 n n C5' C4' GDP sing 221 n n C5' H5' GDP sing 222 n n C5' "H5''" GDP sing 223 n n C4' O4' GDP sing 224 n n C4' C3' GDP sing 225 n n C4' H4' GDP sing 226 n n O4' C1' GDP sing 227 n n C3' O3' GDP sing 228 n n C3' C2' GDP sing 229 n n C3' H3' GDP sing 230 n n O3' HO3' GDP sing 231 n n C2' O2' GDP sing 232 n n C2' C1' GDP sing 233 n n C2' H2' GDP sing 234 n n O2' HO2' GDP sing 235 n n C1' N9 GDP sing 236 n n C1' H1' GDP sing 237 n n N9 C8 GDP sing 238 n y N9 C4 GDP sing 239 n y C8 N7 GDP doub 240 n y C8 H8 GDP sing 241 n n N7 C5 GDP sing 242 n y C5 C6 GDP sing 243 n n C5 C4 GDP doub 244 n y C6 O6 GDP doub 245 n n C6 N1 GDP sing 246 n n N1 C2 GDP sing 247 n n N1 HN1 GDP sing 248 n n C2 N2 GDP sing 249 n n C2 N3 GDP doub 250 n n N2 HN21 GDP sing 251 n n N2 HN22 GDP sing 252 n n N3 C4 GDP sing 253 n n # _atom_sites.entry_id 4O4I _atom_sites.fract_transf_matrix[1][1] 0.009506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006328 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005543 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GDP B 1 501 501 GDP GDP . K 6 MG B 1 502 502 MG MG . L 9 EP B 1 503 503 EP EP . M 6 MG B 1 504 504 MG MG . N 10 LLM B 1 505 505 LLM LLM . O 7 CA B 1 506 506 CA CA . P 11 MES B 1 507 507 MES MES . Q 5 GTP C 1 501 501 GTP GTP . R 6 MG C 1 502 502 MG MG . S 7 CA C 1 503 503 CA CA . T 8 GDP D 1 501 501 GDP GDP . U 6 MG D 1 502 502 MG MG . V 9 EP D 1 503 503 EP EP . W 12 ACP F 1 500 500 ACP ACP . X 6 MG F 1 501 501 MG MG . Y 13 HOH A 1 601 601 HOH HOH . Y 13 HOH A 2 602 602 HOH HOH . Y 13 HOH A 3 603 603 HOH HOH . Y 13 HOH A 4 604 604 HOH HOH . Y 13 HOH A 5 605 605 HOH HOH . Y 13 HOH A 6 606 606 HOH HOH . Y 13 HOH A 7 607 607 HOH HOH . Y 13 HOH A 8 608 608 HOH HOH . Y 13 HOH A 9 609 609 HOH HOH . Y 13 HOH A 10 610 610 HOH HOH . Y 13 HOH A 11 611 611 HOH HOH . Y 13 HOH A 12 612 612 HOH HOH . Y 13 HOH A 13 613 613 HOH HOH . Y 13 HOH A 14 614 614 HOH HOH . Y 13 HOH A 15 615 615 HOH HOH . Y 13 HOH A 16 616 616 HOH HOH . Y 13 HOH A 17 617 617 HOH HOH . Y 13 HOH A 18 618 618 HOH HOH . Y 13 HOH A 19 619 619 HOH HOH . Y 13 HOH A 20 620 620 HOH HOH . Y 13 HOH A 21 621 621 HOH HOH . Y 13 HOH A 22 622 622 HOH HOH . Y 13 HOH A 23 623 623 HOH HOH . Y 13 HOH A 24 624 624 HOH HOH . Y 13 HOH A 25 625 625 HOH HOH . Y 13 HOH A 26 626 626 HOH HOH . Y 13 HOH A 27 627 627 HOH HOH . Y 13 HOH A 28 628 628 HOH HOH . Y 13 HOH A 29 629 629 HOH HOH . Y 13 HOH A 30 630 630 HOH HOH . Y 13 HOH A 31 631 631 HOH HOH . Y 13 HOH A 32 632 632 HOH HOH . Y 13 HOH A 33 633 633 HOH HOH . Y 13 HOH A 34 634 634 HOH HOH . Y 13 HOH A 35 635 635 HOH HOH . Y 13 HOH A 36 636 636 HOH HOH . Y 13 HOH A 37 637 637 HOH HOH . Y 13 HOH A 38 638 638 HOH HOH . Y 13 HOH A 39 639 639 HOH HOH . Y 13 HOH A 40 640 640 HOH HOH . Y 13 HOH A 41 641 641 HOH HOH . Y 13 HOH A 42 642 642 HOH HOH . Y 13 HOH A 43 643 643 HOH HOH . Y 13 HOH A 44 644 644 HOH HOH . Y 13 HOH A 45 645 645 HOH HOH . Y 13 HOH A 46 646 646 HOH HOH . Y 13 HOH A 47 647 647 HOH HOH . Y 13 HOH A 48 648 648 HOH HOH . Y 13 HOH A 49 649 649 HOH HOH . Y 13 HOH A 50 650 650 HOH HOH . Y 13 HOH A 51 651 651 HOH HOH . Y 13 HOH A 52 652 652 HOH HOH . Y 13 HOH A 53 653 653 HOH HOH . Y 13 HOH A 54 654 654 HOH HOH . Y 13 HOH A 55 655 655 HOH HOH . Y 13 HOH A 56 656 656 HOH HOH . Y 13 HOH A 57 657 657 HOH HOH . Y 13 HOH A 58 658 658 HOH HOH . Y 13 HOH A 59 659 659 HOH HOH . Y 13 HOH A 60 660 660 HOH HOH . Y 13 HOH A 61 661 661 HOH HOH . Y 13 HOH A 62 662 662 HOH HOH . Y 13 HOH A 63 663 663 HOH HOH . Y 13 HOH A 64 664 664 HOH HOH . Y 13 HOH A 65 665 665 HOH HOH . Y 13 HOH A 66 666 666 HOH HOH . Y 13 HOH A 67 667 667 HOH HOH . Y 13 HOH A 68 668 668 HOH HOH . Y 13 HOH A 69 669 669 HOH HOH . Y 13 HOH A 70 670 670 HOH HOH . Y 13 HOH A 71 671 671 HOH HOH . Y 13 HOH A 72 672 672 HOH HOH . Y 13 HOH A 73 673 673 HOH HOH . Y 13 HOH A 74 674 674 HOH HOH . Y 13 HOH A 75 675 675 HOH HOH . Y 13 HOH A 76 676 676 HOH HOH . Y 13 HOH A 77 677 677 HOH HOH . Y 13 HOH A 78 678 678 HOH HOH . Y 13 HOH A 79 679 679 HOH HOH . Y 13 HOH A 80 680 680 HOH HOH . Y 13 HOH A 81 681 681 HOH HOH . Y 13 HOH A 82 682 682 HOH HOH . Y 13 HOH A 83 683 683 HOH HOH . Y 13 HOH A 84 684 684 HOH HOH . Y 13 HOH A 85 685 685 HOH HOH . Y 13 HOH A 86 686 686 HOH HOH . Y 13 HOH A 87 687 687 HOH HOH . Y 13 HOH A 88 688 688 HOH HOH . Y 13 HOH A 89 689 689 HOH HOH . Y 13 HOH A 90 690 690 HOH HOH . Y 13 HOH A 91 691 691 HOH HOH . Y 13 HOH A 92 692 692 HOH HOH . Y 13 HOH A 93 693 693 HOH HOH . Y 13 HOH A 94 694 694 HOH HOH . Y 13 HOH A 95 695 695 HOH HOH . Y 13 HOH A 96 696 696 HOH HOH . Y 13 HOH A 97 697 697 HOH HOH . Y 13 HOH A 98 698 698 HOH HOH . Y 13 HOH A 99 699 699 HOH HOH . Y 13 HOH A 100 700 700 HOH HOH . Y 13 HOH A 101 701 701 HOH HOH . Y 13 HOH A 102 702 702 HOH HOH . Y 13 HOH A 103 703 703 HOH HOH . Y 13 HOH A 104 704 704 HOH HOH . Y 13 HOH A 105 705 705 HOH HOH . Y 13 HOH A 106 706 706 HOH HOH . Y 13 HOH A 107 707 707 HOH HOH . Y 13 HOH A 108 708 708 HOH HOH . Y 13 HOH A 109 709 709 HOH HOH . Y 13 HOH A 110 710 710 HOH HOH . Y 13 HOH A 111 711 711 HOH HOH . Y 13 HOH A 112 712 712 HOH HOH . Z 13 HOH B 1 601 601 HOH HOH . Z 13 HOH B 2 602 602 HOH HOH . Z 13 HOH B 3 603 603 HOH HOH . Z 13 HOH B 4 604 604 HOH HOH . Z 13 HOH B 5 605 605 HOH HOH . Z 13 HOH B 6 606 606 HOH HOH . Z 13 HOH B 7 607 607 HOH HOH . Z 13 HOH B 8 608 608 HOH HOH . Z 13 HOH B 9 609 609 HOH HOH . Z 13 HOH B 10 610 610 HOH HOH . Z 13 HOH B 11 611 611 HOH HOH . Z 13 HOH B 12 612 612 HOH HOH . Z 13 HOH B 13 613 613 HOH HOH . Z 13 HOH B 14 614 614 HOH HOH . Z 13 HOH B 15 615 615 HOH HOH . Z 13 HOH B 16 616 616 HOH HOH . Z 13 HOH B 17 617 617 HOH HOH . Z 13 HOH B 18 618 618 HOH HOH . Z 13 HOH B 19 619 619 HOH HOH . Z 13 HOH B 20 620 620 HOH HOH . Z 13 HOH B 21 621 621 HOH HOH . Z 13 HOH B 22 622 622 HOH HOH . Z 13 HOH B 23 623 623 HOH HOH . Z 13 HOH B 24 624 624 HOH HOH . Z 13 HOH B 25 625 625 HOH HOH . Z 13 HOH B 26 626 626 HOH HOH . Z 13 HOH B 27 627 627 HOH HOH . Z 13 HOH B 28 628 628 HOH HOH . Z 13 HOH B 29 629 629 HOH HOH . Z 13 HOH B 30 630 630 HOH HOH . Z 13 HOH B 31 631 631 HOH HOH . Z 13 HOH B 32 632 632 HOH HOH . Z 13 HOH B 33 633 633 HOH HOH . Z 13 HOH B 34 634 634 HOH HOH . Z 13 HOH B 35 635 635 HOH HOH . Z 13 HOH B 36 636 636 HOH HOH . Z 13 HOH B 37 637 637 HOH HOH . Z 13 HOH B 38 638 638 HOH HOH . Z 13 HOH B 39 639 640 HOH HOH . Z 13 HOH B 40 640 641 HOH HOH . Z 13 HOH B 41 641 642 HOH HOH . Z 13 HOH B 42 642 643 HOH HOH . Z 13 HOH B 43 643 644 HOH HOH . Z 13 HOH B 44 644 645 HOH HOH . Z 13 HOH B 45 645 646 HOH HOH . Z 13 HOH B 46 646 647 HOH HOH . Z 13 HOH B 47 647 648 HOH HOH . Z 13 HOH B 48 648 649 HOH HOH . Z 13 HOH B 49 649 650 HOH HOH . Z 13 HOH B 50 650 651 HOH HOH . Z 13 HOH B 51 651 652 HOH HOH . Z 13 HOH B 52 652 653 HOH HOH . Z 13 HOH B 53 653 654 HOH HOH . Z 13 HOH B 54 654 655 HOH HOH . Z 13 HOH B 55 655 656 HOH HOH . Z 13 HOH B 56 656 657 HOH HOH . Z 13 HOH B 57 657 658 HOH HOH . Z 13 HOH B 58 658 659 HOH HOH . Z 13 HOH B 59 659 660 HOH HOH . Z 13 HOH B 60 660 661 HOH HOH . Z 13 HOH B 61 661 662 HOH HOH . Z 13 HOH B 62 662 663 HOH HOH . Z 13 HOH B 63 663 664 HOH HOH . Z 13 HOH B 64 664 665 HOH HOH . Z 13 HOH B 65 665 666 HOH HOH . Z 13 HOH B 66 666 667 HOH HOH . Z 13 HOH B 67 667 668 HOH HOH . Z 13 HOH B 68 668 669 HOH HOH . Z 13 HOH B 69 669 670 HOH HOH . Z 13 HOH B 70 670 671 HOH HOH . Z 13 HOH B 71 671 672 HOH HOH . Z 13 HOH B 72 672 673 HOH HOH . Z 13 HOH B 73 673 674 HOH HOH . Z 13 HOH B 74 674 675 HOH HOH . Z 13 HOH B 75 675 676 HOH HOH . Z 13 HOH B 76 676 677 HOH HOH . Z 13 HOH B 77 677 678 HOH HOH . Z 13 HOH B 78 678 679 HOH HOH . Z 13 HOH B 79 679 680 HOH HOH . Z 13 HOH B 80 680 681 HOH HOH . Z 13 HOH B 81 681 682 HOH HOH . Z 13 HOH B 82 682 683 HOH HOH . Z 13 HOH B 83 683 684 HOH HOH . Z 13 HOH B 84 684 685 HOH HOH . Z 13 HOH B 85 685 686 HOH HOH . Z 13 HOH B 86 686 687 HOH HOH . Z 13 HOH B 87 687 688 HOH HOH . Z 13 HOH B 88 688 689 HOH HOH . Z 13 HOH B 89 689 690 HOH HOH . Z 13 HOH B 90 690 691 HOH HOH . AA 13 HOH C 1 601 639 HOH HOH . AA 13 HOH C 2 602 601 HOH HOH . AA 13 HOH C 3 603 602 HOH HOH . AA 13 HOH C 4 604 603 HOH HOH . AA 13 HOH C 5 605 604 HOH HOH . AA 13 HOH C 6 606 605 HOH HOH . AA 13 HOH C 7 607 606 HOH HOH . AA 13 HOH C 8 608 607 HOH HOH . AA 13 HOH C 9 609 608 HOH HOH . AA 13 HOH C 10 610 609 HOH HOH . AA 13 HOH C 11 611 610 HOH HOH . AA 13 HOH C 12 612 611 HOH HOH . AA 13 HOH C 13 613 612 HOH HOH . AA 13 HOH C 14 614 613 HOH HOH . AA 13 HOH C 15 615 614 HOH HOH . AA 13 HOH C 16 616 615 HOH HOH . AA 13 HOH C 17 617 616 HOH HOH . AA 13 HOH C 18 618 617 HOH HOH . AA 13 HOH C 19 619 618 HOH HOH . AA 13 HOH C 20 620 619 HOH HOH . AA 13 HOH C 21 621 620 HOH HOH . AA 13 HOH C 22 622 621 HOH HOH . AA 13 HOH C 23 623 622 HOH HOH . AA 13 HOH C 24 624 623 HOH HOH . AA 13 HOH C 25 625 624 HOH HOH . AA 13 HOH C 26 626 625 HOH HOH . AA 13 HOH C 27 627 626 HOH HOH . AA 13 HOH C 28 628 627 HOH HOH . AA 13 HOH C 29 629 628 HOH HOH . AA 13 HOH C 30 630 629 HOH HOH . AA 13 HOH C 31 631 630 HOH HOH . AA 13 HOH C 32 632 631 HOH HOH . AA 13 HOH C 33 633 632 HOH HOH . AA 13 HOH C 34 634 633 HOH HOH . AA 13 HOH C 35 635 634 HOH HOH . AA 13 HOH C 36 636 635 HOH HOH . AA 13 HOH C 37 637 636 HOH HOH . AA 13 HOH C 38 638 637 HOH HOH . AA 13 HOH C 39 639 638 HOH HOH . AA 13 HOH C 40 640 639 HOH HOH . AA 13 HOH C 41 641 640 HOH HOH . AA 13 HOH C 42 642 641 HOH HOH . AA 13 HOH C 43 643 642 HOH HOH . AA 13 HOH C 44 644 643 HOH HOH . AA 13 HOH C 45 645 644 HOH HOH . AA 13 HOH C 46 646 645 HOH HOH . AA 13 HOH C 47 647 646 HOH HOH . AA 13 HOH C 48 648 647 HOH HOH . AA 13 HOH C 49 649 648 HOH HOH . AA 13 HOH C 50 650 649 HOH HOH . AA 13 HOH C 51 651 650 HOH HOH . AA 13 HOH C 52 652 651 HOH HOH . AA 13 HOH C 53 653 652 HOH HOH . AA 13 HOH C 54 654 653 HOH HOH . AA 13 HOH C 55 655 654 HOH HOH . AA 13 HOH C 56 656 655 HOH HOH . AA 13 HOH C 57 657 656 HOH HOH . AA 13 HOH C 58 658 657 HOH HOH . AA 13 HOH C 59 659 658 HOH HOH . AA 13 HOH C 60 660 659 HOH HOH . AA 13 HOH C 61 661 660 HOH HOH . AA 13 HOH C 62 662 661 HOH HOH . AA 13 HOH C 63 663 662 HOH HOH . AA 13 HOH C 64 664 663 HOH HOH . AA 13 HOH C 65 665 664 HOH HOH . AA 13 HOH C 66 666 665 HOH HOH . AA 13 HOH C 67 667 666 HOH HOH . AA 13 HOH C 68 668 667 HOH HOH . AA 13 HOH C 69 669 668 HOH HOH . AA 13 HOH C 70 670 669 HOH HOH . AA 13 HOH C 71 671 670 HOH HOH . AA 13 HOH C 72 672 671 HOH HOH . AA 13 HOH C 73 673 672 HOH HOH . AA 13 HOH C 74 674 673 HOH HOH . AA 13 HOH C 75 675 674 HOH HOH . AA 13 HOH C 76 676 675 HOH HOH . AA 13 HOH C 77 677 676 HOH HOH . AA 13 HOH C 78 678 677 HOH HOH . AA 13 HOH C 79 679 678 HOH HOH . AA 13 HOH C 80 680 679 HOH HOH . AA 13 HOH C 81 681 680 HOH HOH . AA 13 HOH C 82 682 681 HOH HOH . AA 13 HOH C 83 683 682 HOH HOH . AA 13 HOH C 84 684 683 HOH HOH . AA 13 HOH C 85 685 684 HOH HOH . AA 13 HOH C 86 686 685 HOH HOH . AA 13 HOH C 87 687 686 HOH HOH . AA 13 HOH C 88 688 687 HOH HOH . AA 13 HOH C 89 689 688 HOH HOH . AA 13 HOH C 90 690 689 HOH HOH . AA 13 HOH C 91 691 690 HOH HOH . AA 13 HOH C 92 692 691 HOH HOH . AA 13 HOH C 93 693 692 HOH HOH . AA 13 HOH C 94 694 693 HOH HOH . AA 13 HOH C 95 695 694 HOH HOH . AA 13 HOH C 96 696 695 HOH HOH . AA 13 HOH C 97 697 696 HOH HOH . AA 13 HOH C 98 698 697 HOH HOH . AA 13 HOH C 99 699 698 HOH HOH . AA 13 HOH C 100 700 699 HOH HOH . AA 13 HOH C 101 701 700 HOH HOH . AA 13 HOH C 102 702 701 HOH HOH . AA 13 HOH C 103 703 702 HOH HOH . AA 13 HOH C 104 704 703 HOH HOH . AA 13 HOH C 105 705 704 HOH HOH . AA 13 HOH C 106 706 705 HOH HOH . AA 13 HOH C 107 707 706 HOH HOH . AA 13 HOH C 108 708 707 HOH HOH . AA 13 HOH C 109 709 708 HOH HOH . AA 13 HOH C 110 710 709 HOH HOH . AA 13 HOH C 111 711 710 HOH HOH . AA 13 HOH C 112 712 711 HOH HOH . AA 13 HOH C 113 713 712 HOH HOH . AA 13 HOH C 114 714 713 HOH HOH . AA 13 HOH C 115 715 714 HOH HOH . AA 13 HOH C 116 716 715 HOH HOH . AA 13 HOH C 117 717 716 HOH HOH . AA 13 HOH C 118 718 717 HOH HOH . AA 13 HOH C 119 719 718 HOH HOH . AA 13 HOH C 120 720 719 HOH HOH . AA 13 HOH C 121 721 721 HOH HOH . AA 13 HOH C 122 722 722 HOH HOH . AA 13 HOH C 123 723 723 HOH HOH . AA 13 HOH C 124 724 724 HOH HOH . AA 13 HOH C 125 725 725 HOH HOH . AA 13 HOH C 126 726 726 HOH HOH . AA 13 HOH C 127 727 727 HOH HOH . AA 13 HOH C 128 728 728 HOH HOH . AA 13 HOH C 129 729 729 HOH HOH . AA 13 HOH C 130 730 730 HOH HOH . AA 13 HOH C 131 731 731 HOH HOH . AA 13 HOH C 132 732 732 HOH HOH . AA 13 HOH C 133 733 733 HOH HOH . AA 13 HOH C 134 734 734 HOH HOH . AA 13 HOH C 135 735 735 HOH HOH . AA 13 HOH C 136 736 736 HOH HOH . AA 13 HOH C 137 737 737 HOH HOH . AA 13 HOH C 138 738 738 HOH HOH . AA 13 HOH C 139 739 739 HOH HOH . AA 13 HOH C 140 740 740 HOH HOH . AA 13 HOH C 141 741 741 HOH HOH . AA 13 HOH C 142 742 742 HOH HOH . AA 13 HOH C 143 743 743 HOH HOH . AA 13 HOH C 144 744 744 HOH HOH . AA 13 HOH C 145 745 745 HOH HOH . AA 13 HOH C 146 746 746 HOH HOH . AA 13 HOH C 147 747 747 HOH HOH . AA 13 HOH C 148 748 748 HOH HOH . AA 13 HOH C 149 749 749 HOH HOH . AA 13 HOH C 150 750 750 HOH HOH . AA 13 HOH C 151 751 751 HOH HOH . AA 13 HOH C 152 752 752 HOH HOH . AA 13 HOH C 153 753 753 HOH HOH . AA 13 HOH C 154 754 754 HOH HOH . AA 13 HOH C 155 755 755 HOH HOH . AA 13 HOH C 156 756 756 HOH HOH . AA 13 HOH C 157 757 757 HOH HOH . AA 13 HOH C 158 758 758 HOH HOH . AA 13 HOH C 159 759 759 HOH HOH . AA 13 HOH C 160 760 760 HOH HOH . AA 13 HOH C 161 761 761 HOH HOH . BA 13 HOH D 1 601 601 HOH HOH . BA 13 HOH D 2 602 602 HOH HOH . BA 13 HOH D 3 603 603 HOH HOH . BA 13 HOH D 4 604 604 HOH HOH . BA 13 HOH D 5 605 605 HOH HOH . BA 13 HOH D 6 606 606 HOH HOH . BA 13 HOH D 7 607 607 HOH HOH . BA 13 HOH D 8 608 608 HOH HOH . BA 13 HOH D 9 609 609 HOH HOH . BA 13 HOH D 10 610 610 HOH HOH . BA 13 HOH D 11 611 611 HOH HOH . BA 13 HOH D 12 612 612 HOH HOH . BA 13 HOH D 13 613 613 HOH HOH . BA 13 HOH D 14 614 614 HOH HOH . BA 13 HOH D 15 615 615 HOH HOH . BA 13 HOH D 16 616 616 HOH HOH . BA 13 HOH D 17 617 617 HOH HOH . BA 13 HOH D 18 618 618 HOH HOH . BA 13 HOH D 19 619 619 HOH HOH . BA 13 HOH D 20 620 620 HOH HOH . BA 13 HOH D 21 621 621 HOH HOH . BA 13 HOH D 22 622 622 HOH HOH . BA 13 HOH D 23 623 623 HOH HOH . BA 13 HOH D 24 624 624 HOH HOH . BA 13 HOH D 25 625 625 HOH HOH . BA 13 HOH D 26 626 626 HOH HOH . BA 13 HOH D 27 627 627 HOH HOH . BA 13 HOH D 28 628 628 HOH HOH . BA 13 HOH D 29 629 629 HOH HOH . BA 13 HOH D 30 630 630 HOH HOH . BA 13 HOH D 31 631 631 HOH HOH . BA 13 HOH D 32 632 632 HOH HOH . BA 13 HOH D 33 633 633 HOH HOH . BA 13 HOH D 34 634 634 HOH HOH . BA 13 HOH D 35 635 635 HOH HOH . BA 13 HOH D 36 636 636 HOH HOH . BA 13 HOH D 37 637 637 HOH HOH . BA 13 HOH D 38 638 638 HOH HOH . BA 13 HOH D 39 639 639 HOH HOH . BA 13 HOH D 40 640 640 HOH HOH . BA 13 HOH D 41 641 641 HOH HOH . BA 13 HOH D 42 642 642 HOH HOH . BA 13 HOH D 43 643 643 HOH HOH . BA 13 HOH D 44 644 644 HOH HOH . BA 13 HOH D 45 645 645 HOH HOH . BA 13 HOH D 46 646 646 HOH HOH . BA 13 HOH D 47 647 647 HOH HOH . BA 13 HOH D 48 648 648 HOH HOH . BA 13 HOH D 49 649 649 HOH HOH . BA 13 HOH D 50 650 650 HOH HOH . BA 13 HOH D 51 651 651 HOH HOH . BA 13 HOH D 52 652 652 HOH HOH . BA 13 HOH D 53 653 653 HOH HOH . BA 13 HOH D 54 654 654 HOH HOH . BA 13 HOH D 55 655 655 HOH HOH . BA 13 HOH D 56 656 656 HOH HOH . BA 13 HOH D 57 657 657 HOH HOH . BA 13 HOH D 58 658 658 HOH HOH . BA 13 HOH D 59 659 659 HOH HOH . BA 13 HOH D 60 660 660 HOH HOH . BA 13 HOH D 61 661 661 HOH HOH . BA 13 HOH D 62 662 662 HOH HOH . BA 13 HOH D 63 663 663 HOH HOH . CA 13 HOH E 1 201 201 HOH HOH . CA 13 HOH E 2 202 202 HOH HOH . CA 13 HOH E 3 203 203 HOH HOH . CA 13 HOH E 4 204 204 HOH HOH . CA 13 HOH E 5 205 205 HOH HOH . CA 13 HOH E 6 206 206 HOH HOH . CA 13 HOH E 7 207 207 HOH HOH . CA 13 HOH E 8 208 208 HOH HOH . CA 13 HOH E 9 209 209 HOH HOH . CA 13 HOH E 10 210 210 HOH HOH . CA 13 HOH E 11 211 211 HOH HOH . CA 13 HOH E 12 212 212 HOH HOH . CA 13 HOH E 13 213 213 HOH HOH . CA 13 HOH E 14 214 214 HOH HOH . CA 13 HOH E 15 215 215 HOH HOH . CA 13 HOH E 16 216 216 HOH HOH . CA 13 HOH E 17 217 217 HOH HOH . CA 13 HOH E 18 218 218 HOH HOH . CA 13 HOH E 19 219 219 HOH HOH . CA 13 HOH E 20 220 220 HOH HOH . CA 13 HOH E 21 221 221 HOH HOH . CA 13 HOH E 22 222 222 HOH HOH . CA 13 HOH E 23 223 223 HOH HOH . CA 13 HOH E 24 224 224 HOH HOH . CA 13 HOH E 25 225 225 HOH HOH . CA 13 HOH E 26 226 226 HOH HOH . CA 13 HOH E 27 227 227 HOH HOH . CA 13 HOH E 28 228 228 HOH HOH . CA 13 HOH E 29 229 229 HOH HOH . CA 13 HOH E 30 230 230 HOH HOH . CA 13 HOH E 31 231 231 HOH HOH . CA 13 HOH E 32 232 232 HOH HOH . CA 13 HOH E 33 233 233 HOH HOH . CA 13 HOH E 34 234 234 HOH HOH . DA 13 HOH F 1 601 601 HOH HOH . DA 13 HOH F 2 602 602 HOH HOH . DA 13 HOH F 3 603 603 HOH HOH . DA 13 HOH F 4 604 604 HOH HOH . DA 13 HOH F 5 605 605 HOH HOH . DA 13 HOH F 6 606 606 HOH HOH . DA 13 HOH F 7 607 607 HOH HOH . DA 13 HOH F 8 608 608 HOH HOH . DA 13 HOH F 9 609 609 HOH HOH . DA 13 HOH F 10 610 610 HOH HOH . DA 13 HOH F 11 611 611 HOH HOH . DA 13 HOH F 12 612 612 HOH HOH . DA 13 HOH F 13 613 613 HOH HOH . DA 13 HOH F 14 614 614 HOH HOH . DA 13 HOH F 15 615 615 HOH HOH . DA 13 HOH F 16 616 616 HOH HOH . DA 13 HOH F 17 617 617 HOH HOH . DA 13 HOH F 18 618 618 HOH HOH . DA 13 HOH F 19 619 619 HOH HOH . DA 13 HOH F 20 620 620 HOH HOH . DA 13 HOH F 21 621 621 HOH HOH . DA 13 HOH F 22 622 622 HOH HOH . DA 13 HOH F 23 623 623 HOH HOH . DA 13 HOH F 24 624 624 HOH HOH . DA 13 HOH F 25 625 625 HOH HOH . DA 13 HOH F 26 626 626 HOH HOH . DA 13 HOH F 27 627 627 HOH HOH . DA 13 HOH F 28 628 628 HOH HOH . DA 13 HOH F 29 629 629 HOH HOH . DA 13 HOH F 30 630 630 HOH HOH . DA 13 HOH F 31 631 631 HOH HOH . DA 13 HOH F 32 632 632 HOH HOH . DA 13 HOH F 33 633 633 HOH HOH . DA 13 HOH F 34 634 634 HOH HOH . DA 13 HOH F 35 635 635 HOH HOH . DA 13 HOH F 36 636 636 HOH HOH . DA 13 HOH F 37 637 637 HOH HOH . DA 13 HOH F 38 638 638 HOH HOH . DA 13 HOH F 39 639 639 HOH HOH . DA 13 HOH F 40 640 640 HOH HOH . DA 13 HOH F 41 641 642 HOH HOH . DA 13 HOH F 42 642 643 HOH HOH . DA 13 HOH F 43 643 644 HOH HOH . DA 13 HOH F 44 644 645 HOH HOH . DA 13 HOH F 45 645 646 HOH HOH . DA 13 HOH F 46 646 647 HOH HOH . DA 13 HOH F 47 647 649 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 8 19.301 49.428 15.956 1 24.67 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . J 8 18.985 50.392 14.84 1 25.53 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . J 8 19.851 50.171 17.155 1 28.23 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . J 8 20.327 48.421 15.505 1 27.65 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . J 8 18.018 48.552 16.348 1 28.27 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . J 8 16.724 49.057 17.148 1 29.03 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . J 8 15.529 49.155 16.248 1 28.78 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . J 8 16.957 50.329 17.923 1 35.32 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . J 8 16.606 47.812 18.151 1 22.99 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . J 8 15.395 47.102 18.293 1 26.14 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . J 8 14.93 47.226 19.73 1 29.93 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . J 8 14.433 48.551 19.922 1 28.76 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . J 8 13.753 46.306 19.945 1 31.28 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . J 8 13.682 45.976 21.334 1 32.42 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . J 8 12.566 47.159 19.558 1 29.69 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . J 8 11.407 46.743 20.275 1 33.01 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . J 8 13.008 48.528 20.02 1 27.51 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . J 8 12.52 49.669 19.215 1 31.51 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . J 8 12.789 49.954 17.924 1 24 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . J 8 12.203 51.128 17.559 1 21.26 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . J 8 11.557 51.607 18.645 1 25.09 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . J 8 10.74 52.791 18.98 1 26.81 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . J 8 10.491 53.667 18.129 1 32.83 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . J 8 10.277 52.906 20.225 1 25.6 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . J 8 10.519 51.993 21.176 1 23.9 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . J 8 9.999 52.193 22.412 1 18.48 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . J 8 11.257 50.881 20.946 1 23.32 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . J 8 11.785 50.649 19.729 1 26.98 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 414 _model_server_stats.encode_time_ms 22 _model_server_stats.element_count 28 #