data_4O4Z # _model_server_result.job_id x_DWQt3DvwlLwsHaHWqeqA _model_server_result.datetime_utc '2024-11-14 04:26:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o4z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 4O4Z # _exptl.entry_id 4O4Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 44.013 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITROUS OXIDE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4O4Z _cell.length_a 89.275 _cell.length_b 89.275 _cell.length_c 114.765 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O4Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 67 A HIS 64 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc2 A NE2 HIS 99 A HIS 96 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? # _chem_comp.formula 'N2 O' _chem_comp.formula_weight 44.013 _chem_comp.id N2O _chem_comp.mon_nstd_flag . _chem_comp.name 'NITROUS OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'NITROGEN OXIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 N2 N2O sing 319 n n N2 N1 N2O trip 320 n n # _atom_sites.entry_id 4O4Z _atom_sites.fract_transf_matrix[1][1] 0.011201 _atom_sites.fract_transf_matrix[1][2] 0.006467 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012934 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008713 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 160 HEM HEM . C 3 SO4 A 1 202 170 SO4 SO4 . D 4 N2O A 1 203 181 N2O N2O . E 4 N2O A 1 204 182 N2O N2O . F 4 N2O A 1 205 183 N2O N2O . G 4 N2O A 1 206 184 N2O N2O . H 4 N2O A 1 207 186 N2O N2O . I 5 HOH A 1 301 201 HOH HOH . I 5 HOH A 2 302 202 HOH HOH . I 5 HOH A 3 303 203 HOH HOH . I 5 HOH A 4 304 204 HOH HOH . I 5 HOH A 5 305 205 HOH HOH . I 5 HOH A 6 306 206 HOH HOH . I 5 HOH A 7 307 207 HOH HOH . I 5 HOH A 8 308 208 HOH HOH . I 5 HOH A 9 309 209 HOH HOH . I 5 HOH A 10 310 210 HOH HOH . I 5 HOH A 11 311 211 HOH HOH . I 5 HOH A 12 312 212 HOH HOH . I 5 HOH A 13 313 213 HOH HOH . I 5 HOH A 14 314 214 HOH HOH . I 5 HOH A 15 315 215 HOH HOH . I 5 HOH A 16 316 216 HOH HOH . I 5 HOH A 17 317 217 HOH HOH . I 5 HOH A 18 318 218 HOH HOH . I 5 HOH A 19 319 219 HOH HOH . I 5 HOH A 20 320 220 HOH HOH . I 5 HOH A 21 321 221 HOH HOH . I 5 HOH A 22 322 222 HOH HOH . I 5 HOH A 23 323 223 HOH HOH . I 5 HOH A 24 324 224 HOH HOH . I 5 HOH A 25 325 225 HOH HOH . I 5 HOH A 26 326 226 HOH HOH . I 5 HOH A 27 327 227 HOH HOH . I 5 HOH A 28 328 228 HOH HOH . I 5 HOH A 29 329 229 HOH HOH . I 5 HOH A 30 330 230 HOH HOH . I 5 HOH A 31 331 231 HOH HOH . I 5 HOH A 32 332 232 HOH HOH . I 5 HOH A 33 333 233 HOH HOH . I 5 HOH A 34 334 234 HOH HOH . I 5 HOH A 35 335 235 HOH HOH . I 5 HOH A 36 336 236 HOH HOH . I 5 HOH A 37 337 237 HOH HOH . I 5 HOH A 38 338 238 HOH HOH . I 5 HOH A 39 339 240 HOH HOH . I 5 HOH A 40 340 241 HOH HOH . I 5 HOH A 41 341 242 HOH HOH . I 5 HOH A 42 342 245 HOH HOH . I 5 HOH A 43 343 246 HOH HOH . I 5 HOH A 44 344 247 HOH HOH . I 5 HOH A 45 345 248 HOH HOH . I 5 HOH A 46 346 252 HOH HOH . I 5 HOH A 47 347 253 HOH HOH . I 5 HOH A 48 348 255 HOH HOH . I 5 HOH A 49 349 256 HOH HOH . I 5 HOH A 50 350 257 HOH HOH . I 5 HOH A 51 351 258 HOH HOH . I 5 HOH A 52 352 259 HOH HOH . I 5 HOH A 53 353 260 HOH HOH . I 5 HOH A 54 354 261 HOH HOH . I 5 HOH A 55 355 263 HOH HOH . I 5 HOH A 56 356 264 HOH HOH . I 5 HOH A 57 357 265 HOH HOH . I 5 HOH A 58 358 266 HOH HOH . I 5 HOH A 59 359 270 HOH HOH . I 5 HOH A 60 360 272 HOH HOH . I 5 HOH A 61 361 275 HOH HOH . I 5 HOH A 62 362 281 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 N2O . . . E 4 12.799 53.696 22.273 0.6 26.27 ? O3 N2O 204 A 1 HETATM 2 N N2 N2O . . . E 4 13.645 53.708 23.142 0.6 23.58 ? N2 N2O 204 A 1 HETATM 3 N N1 N2O . . . E 4 14.453 53.7 23.957 0.6 23.99 ? N1 N2O 204 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 3 #