data_4O67 # _model_server_result.job_id jQnWW_0LdFwerkki1CTp0Q _model_server_result.datetime_utc '2024-11-24 14:12:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o67 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 4O67 # _exptl.entry_id 4O67 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O67 _cell.length_a 47.822 _cell.length_b 118.542 _cell.length_c 124.025 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O67 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 B,E,F,H 2 1 A,C,D,G 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 231 A HIS 390 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc2 A SG CYS 237 A CYS 396 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc3 A SG CYS 238 A CYS 397 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc4 A SG CYS 245 A CYS 404 1_555 D ZN ZN . A ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc5 B NE2 HIS 231 B HIS 390 1_555 F ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc6 B SG CYS 237 B CYS 396 1_555 F ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc7 B SG CYS 238 B CYS 397 1_555 F ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc8 B SG CYS 245 B CYS 404 1_555 F ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4O67 _atom_sites.fract_transf_matrix[1][1] 0.020911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008436 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008063 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1SY A 1 601 1100 1SY 1SY . D 3 ZN A 1 602 1 ZN ZN . E 2 1SY B 1 1101 1101 1SY 1SY . F 3 ZN B 1 1102 2 ZN ZN . G 4 HOH A 1 701 2 HOH HOH . G 4 HOH A 2 702 3 HOH HOH . G 4 HOH A 3 703 7 HOH HOH . G 4 HOH A 4 704 10 HOH HOH . G 4 HOH A 5 705 11 HOH HOH . G 4 HOH A 6 706 15 HOH HOH . G 4 HOH A 7 707 16 HOH HOH . G 4 HOH A 8 708 18 HOH HOH . G 4 HOH A 9 709 24 HOH HOH . G 4 HOH A 10 710 26 HOH HOH . G 4 HOH A 11 711 27 HOH HOH . G 4 HOH A 12 712 32 HOH HOH . G 4 HOH A 13 713 35 HOH HOH . G 4 HOH A 14 714 36 HOH HOH . G 4 HOH A 15 715 38 HOH HOH . G 4 HOH A 16 716 41 HOH HOH . G 4 HOH A 17 717 43 HOH HOH . G 4 HOH A 18 718 45 HOH HOH . G 4 HOH A 19 719 46 HOH HOH . G 4 HOH A 20 720 47 HOH HOH . G 4 HOH A 21 721 48 HOH HOH . G 4 HOH A 22 722 50 HOH HOH . G 4 HOH A 23 723 52 HOH HOH . G 4 HOH A 24 724 53 HOH HOH . G 4 HOH A 25 725 54 HOH HOH . G 4 HOH A 26 726 56 HOH HOH . G 4 HOH A 27 727 57 HOH HOH . G 4 HOH A 28 728 59 HOH HOH . G 4 HOH A 29 729 61 HOH HOH . G 4 HOH A 30 730 65 HOH HOH . G 4 HOH A 31 731 67 HOH HOH . G 4 HOH A 32 732 68 HOH HOH . G 4 HOH A 33 733 73 HOH HOH . G 4 HOH A 34 734 74 HOH HOH . G 4 HOH A 35 735 78 HOH HOH . G 4 HOH A 36 736 80 HOH HOH . G 4 HOH A 37 737 81 HOH HOH . G 4 HOH A 38 738 86 HOH HOH . G 4 HOH A 39 739 87 HOH HOH . G 4 HOH A 40 740 93 HOH HOH . G 4 HOH A 41 741 94 HOH HOH . G 4 HOH A 42 742 102 HOH HOH . G 4 HOH A 43 743 104 HOH HOH . G 4 HOH A 44 744 106 HOH HOH . G 4 HOH A 45 745 107 HOH HOH . H 4 HOH B 1 1201 4 HOH HOH . H 4 HOH B 2 1202 5 HOH HOH . H 4 HOH B 3 1203 6 HOH HOH . H 4 HOH B 4 1204 8 HOH HOH . H 4 HOH B 5 1205 9 HOH HOH . H 4 HOH B 6 1206 12 HOH HOH . H 4 HOH B 7 1207 13 HOH HOH . H 4 HOH B 8 1208 14 HOH HOH . H 4 HOH B 9 1209 17 HOH HOH . H 4 HOH B 10 1210 19 HOH HOH . H 4 HOH B 11 1211 20 HOH HOH . H 4 HOH B 12 1212 21 HOH HOH . H 4 HOH B 13 1213 22 HOH HOH . H 4 HOH B 14 1214 23 HOH HOH . H 4 HOH B 15 1215 25 HOH HOH . H 4 HOH B 16 1216 28 HOH HOH . H 4 HOH B 17 1217 29 HOH HOH . H 4 HOH B 18 1218 30 HOH HOH . H 4 HOH B 19 1219 33 HOH HOH . H 4 HOH B 20 1220 34 HOH HOH . H 4 HOH B 21 1221 39 HOH HOH . H 4 HOH B 22 1222 40 HOH HOH . H 4 HOH B 23 1223 42 HOH HOH . H 4 HOH B 24 1224 49 HOH HOH . H 4 HOH B 25 1225 51 HOH HOH . H 4 HOH B 26 1226 55 HOH HOH . H 4 HOH B 27 1227 60 HOH HOH . H 4 HOH B 28 1228 62 HOH HOH . H 4 HOH B 29 1229 63 HOH HOH . H 4 HOH B 30 1230 69 HOH HOH . H 4 HOH B 31 1231 70 HOH HOH . H 4 HOH B 32 1232 71 HOH HOH . H 4 HOH B 33 1233 75 HOH HOH . H 4 HOH B 34 1234 77 HOH HOH . H 4 HOH B 35 1235 83 HOH HOH . H 4 HOH B 36 1236 91 HOH HOH . H 4 HOH B 37 1237 92 HOH HOH . H 4 HOH B 38 1238 95 HOH HOH . H 4 HOH B 39 1239 96 HOH HOH . H 4 HOH B 40 1240 97 HOH HOH . H 4 HOH B 41 1241 98 HOH HOH . H 4 HOH B 42 1242 99 HOH HOH . H 4 HOH B 43 1243 100 HOH HOH . H 4 HOH B 44 1244 105 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.851 _atom_site.Cartn_y 58.219 _atom_site.Cartn_z 152.567 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 526 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #