data_4O6F # _model_server_result.job_id X_e-oTS44D3aLP6-m_giNQ _model_server_result.datetime_utc '2025-03-21 00:45:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o6f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":505}' # _entry.id 4O6F # _exptl.entry_id 4O6F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 370.436 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O6F _cell.length_a 151.81 _cell.length_b 151.81 _cell.length_c 52.873 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 52 A CYS 52 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc2 A SG CYS 55 A CYS 55 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc3 A SG CYS 65 A CYS 65 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc4 A SG CYS 68 A CYS 68 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc5 A SG CYS 74 A CYS 74 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc6 A SG CYS 78 A CYS 78 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc7 A NE2 HIS 86 A HIS 86 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc8 A SG CYS 90 A CYS 90 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc9 A SG CYS 209 A CYS 209 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc10 A SG CYS 210 A CYS 210 1_555 I NI NI . A NI 507 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc11 A SG CYS 262 A CYS 262 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc12 A SG CYS 264 A CYS 264 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc13 A SG CYS 267 A CYS 267 1_555 E ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? # _chem_comp.formula 'C16 H34 O9' _chem_comp.formula_weight 370.436 _chem_comp.id PE8 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 PE8 sing 237 n n O1 HO1 PE8 sing 238 n n C2 C3 PE8 sing 239 n n C2 H21 PE8 sing 240 n n C2 H22 PE8 sing 241 n n C3 O4 PE8 sing 242 n n C3 H31 PE8 sing 243 n n C3 H32 PE8 sing 244 n n O4 C5 PE8 sing 245 n n C5 C6 PE8 sing 246 n n C5 H51 PE8 sing 247 n n C5 H52 PE8 sing 248 n n C6 O7 PE8 sing 249 n n C6 H61 PE8 sing 250 n n C6 H62 PE8 sing 251 n n O7 C8 PE8 sing 252 n n C8 C9 PE8 sing 253 n n C8 H81 PE8 sing 254 n n C8 H82 PE8 sing 255 n n C9 O10 PE8 sing 256 n n C9 H91 PE8 sing 257 n n C9 H92 PE8 sing 258 n n O10 C11 PE8 sing 259 n n C11 C12 PE8 sing 260 n n C11 H111 PE8 sing 261 n n C11 H112 PE8 sing 262 n n C12 O13 PE8 sing 263 n n C12 H121 PE8 sing 264 n n C12 H122 PE8 sing 265 n n O13 C14 PE8 sing 266 n n C14 C15 PE8 sing 267 n n C14 H141 PE8 sing 268 n n C14 H142 PE8 sing 269 n n C15 O16 PE8 sing 270 n n C15 H151 PE8 sing 271 n n C15 H152 PE8 sing 272 n n O16 C17 PE8 sing 273 n n C17 C18 PE8 sing 274 n n C17 H171 PE8 sing 275 n n C17 H172 PE8 sing 276 n n C18 O19 PE8 sing 277 n n C18 H181 PE8 sing 278 n n C18 H182 PE8 sing 279 n n O19 C20 PE8 sing 280 n n C20 C21 PE8 sing 281 n n C20 H201 PE8 sing 282 n n C20 H202 PE8 sing 283 n n C21 O22 PE8 sing 284 n n C21 H211 PE8 sing 285 n n C21 H212 PE8 sing 286 n n O22 C23 PE8 sing 287 n n C23 C24 PE8 sing 288 n n C23 H231 PE8 sing 289 n n C23 H232 PE8 sing 290 n n C24 O25 PE8 sing 291 n n C24 H241 PE8 sing 292 n n C24 H242 PE8 sing 293 n n O25 H25 PE8 sing 294 n n # _atom_sites.entry_id 4O6F _atom_sites.fract_transf_matrix[1][1] 0.006587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006587 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 501 435 ZN ZN . D 3 ZN A 1 502 436 ZN ZN . E 3 ZN A 1 503 437 ZN ZN . F 4 SAH A 1 504 434 SAH SAH . G 5 PE8 A 1 505 1 PE8 PE8 . H 6 NI A 1 506 1 NI NI . I 6 NI A 1 507 2 NI NI . J 7 HOH A 1 601 1 HOH HOH . J 7 HOH A 2 602 2 HOH HOH . J 7 HOH A 3 603 3 HOH HOH . J 7 HOH A 4 604 4 HOH HOH . J 7 HOH A 5 605 5 HOH HOH . J 7 HOH A 6 606 6 HOH HOH . J 7 HOH A 7 607 7 HOH HOH . J 7 HOH A 8 608 8 HOH HOH . J 7 HOH A 9 609 9 HOH HOH . J 7 HOH A 10 610 10 HOH HOH . J 7 HOH A 11 611 11 HOH HOH . J 7 HOH A 12 612 12 HOH HOH . J 7 HOH A 13 613 13 HOH HOH . J 7 HOH A 14 614 14 HOH HOH . J 7 HOH A 15 615 15 HOH HOH . J 7 HOH A 16 616 16 HOH HOH . J 7 HOH A 17 617 17 HOH HOH . J 7 HOH A 18 618 18 HOH HOH . J 7 HOH A 19 619 19 HOH HOH . J 7 HOH A 20 620 20 HOH HOH . J 7 HOH A 21 621 21 HOH HOH . J 7 HOH A 22 622 22 HOH HOH . J 7 HOH A 23 623 23 HOH HOH . J 7 HOH A 24 624 24 HOH HOH . J 7 HOH A 25 625 25 HOH HOH . J 7 HOH A 26 626 26 HOH HOH . J 7 HOH A 27 627 27 HOH HOH . J 7 HOH A 28 628 28 HOH HOH . J 7 HOH A 29 629 29 HOH HOH . J 7 HOH A 30 630 30 HOH HOH . J 7 HOH A 31 631 31 HOH HOH . J 7 HOH A 32 632 32 HOH HOH . J 7 HOH A 33 633 33 HOH HOH . J 7 HOH A 34 634 34 HOH HOH . J 7 HOH A 35 635 35 HOH HOH . J 7 HOH A 36 636 36 HOH HOH . J 7 HOH A 37 637 37 HOH HOH . J 7 HOH A 38 638 38 HOH HOH . J 7 HOH A 39 639 39 HOH HOH . J 7 HOH A 40 640 40 HOH HOH . J 7 HOH A 41 641 41 HOH HOH . J 7 HOH A 42 642 42 HOH HOH . J 7 HOH A 43 643 43 HOH HOH . J 7 HOH A 44 644 44 HOH HOH . J 7 HOH A 45 645 45 HOH HOH . J 7 HOH A 46 646 46 HOH HOH . J 7 HOH A 47 647 47 HOH HOH . J 7 HOH A 48 648 48 HOH HOH . J 7 HOH A 49 649 49 HOH HOH . J 7 HOH A 50 650 50 HOH HOH . J 7 HOH A 51 651 51 HOH HOH . J 7 HOH A 52 652 52 HOH HOH . J 7 HOH A 53 653 53 HOH HOH . J 7 HOH A 54 654 54 HOH HOH . J 7 HOH A 55 655 55 HOH HOH . J 7 HOH A 56 656 56 HOH HOH . J 7 HOH A 57 657 57 HOH HOH . J 7 HOH A 58 658 59 HOH HOH . J 7 HOH A 59 659 60 HOH HOH . J 7 HOH A 60 660 61 HOH HOH . J 7 HOH A 61 661 62 HOH HOH . J 7 HOH A 62 662 63 HOH HOH . J 7 HOH A 63 663 64 HOH HOH . J 7 HOH A 64 664 65 HOH HOH . J 7 HOH A 65 665 66 HOH HOH . J 7 HOH A 66 666 67 HOH HOH . J 7 HOH A 67 667 68 HOH HOH . J 7 HOH A 68 668 69 HOH HOH . J 7 HOH A 69 669 70 HOH HOH . J 7 HOH A 70 670 71 HOH HOH . J 7 HOH A 71 671 72 HOH HOH . J 7 HOH A 72 672 73 HOH HOH . J 7 HOH A 73 673 74 HOH HOH . J 7 HOH A 74 674 75 HOH HOH . J 7 HOH A 75 675 76 HOH HOH . J 7 HOH A 76 676 77 HOH HOH . J 7 HOH A 77 677 78 HOH HOH . J 7 HOH A 78 678 79 HOH HOH . J 7 HOH A 79 679 81 HOH HOH . J 7 HOH A 80 680 83 HOH HOH . J 7 HOH A 81 681 84 HOH HOH . J 7 HOH A 82 682 86 HOH HOH . J 7 HOH A 83 683 87 HOH HOH . J 7 HOH A 84 684 88 HOH HOH . J 7 HOH A 85 685 89 HOH HOH . J 7 HOH A 86 686 90 HOH HOH . J 7 HOH A 87 687 91 HOH HOH . J 7 HOH A 88 688 93 HOH HOH . J 7 HOH A 89 689 95 HOH HOH . J 7 HOH A 90 690 96 HOH HOH . J 7 HOH A 91 691 97 HOH HOH . J 7 HOH A 92 692 99 HOH HOH . K 7 HOH B 1 301 58 HOH HOH . K 7 HOH B 2 302 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PE8 . . . G 5 48.729 192.815 -35.891 1 32.41 ? O1 PE8 505 A 1 HETATM 2 C C2 PE8 . . . G 5 49.525 191.981 -35.077 1 31.5 ? C2 PE8 505 A 1 HETATM 3 C C3 PE8 . . . G 5 49.646 190.599 -35.719 1 20.39 ? C3 PE8 505 A 1 HETATM 4 O O4 PE8 . . . G 5 50.961 190.12 -35.615 1 23.71 ? O4 PE8 505 A 1 HETATM 5 C C5 PE8 . . . G 5 51.145 188.828 -36.145 1 21 ? C5 PE8 505 A 1 HETATM 6 C C6 PE8 . . . G 5 52.223 188.062 -35.342 1 19.31 ? C6 PE8 505 A 1 HETATM 7 O O7 PE8 . . . G 5 51.693 186.824 -34.821 1 27.04 ? O7 PE8 505 A 1 HETATM 8 C C8 PE8 . . . G 5 51.395 186.805 -33.409 1 22.36 ? C8 PE8 505 A 1 HETATM 9 C C9 PE8 . . . G 5 51.446 185.373 -32.806 1 13.72 ? C9 PE8 505 A 1 HETATM 10 O O10 PE8 . . . G 5 50.685 185.368 -31.638 1 22.07 ? O10 PE8 505 A 1 HETATM 11 C C11 PE8 . . . G 5 49.349 184.876 -31.743 1 39.45 ? C11 PE8 505 A 1 HETATM 12 C C12 PE8 . . . G 5 49.053 183.869 -30.624 1 20.43 ? C12 PE8 505 A 1 HETATM 13 O O13 PE8 . . . G 5 47.859 183.135 -30.853 1 7.99 ? O13 PE8 505 A 1 HETATM 14 C C14 PE8 . . . G 5 47.812 182.283 -32.027 1 23.13 ? C14 PE8 505 A 1 HETATM 15 C C15 PE8 . . . G 5 47.943 180.816 -31.671 1 13.16 ? C15 PE8 505 A 1 HETATM 16 O O16 PE8 . . . G 5 49.169 180.33 -32.261 1 29.81 ? O16 PE8 505 A 1 HETATM 17 C C17 PE8 . . . G 5 49.059 179.249 -33.182 1 25.9 ? C17 PE8 505 A 1 HETATM 18 C C18 PE8 . . . G 5 50.211 179.331 -34.209 1 17.79 ? C18 PE8 505 A 1 HETATM 19 O O19 PE8 . . . G 5 49.729 178.952 -35.534 1 42.39 ? O19 PE8 505 A 1 HETATM 20 C C20 PE8 . . . G 5 50.506 179.433 -36.627 1 31.71 ? C20 PE8 505 A 1 HETATM 21 C C21 PE8 . . . G 5 51.309 178.27 -37.248 1 31.47 ? C21 PE8 505 A 1 HETATM 22 O O22 PE8 . . . G 5 51.288 178.322 -38.663 1 44.93 ? O22 PE8 505 A 1 HETATM 23 C C23 PE8 . . . G 5 52.059 177.298 -39.266 1 50.15 ? C23 PE8 505 A 1 HETATM 24 C C24 PE8 . . . G 5 53.106 177.892 -40.178 1 34.15 ? C24 PE8 505 A 1 HETATM 25 O O25 PE8 . . . G 5 54.33 177.294 -39.911 1 35.13 ? O25 PE8 505 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 25 #