data_4O6L # _model_server_result.job_id y7yg3sFilFAJkVB1zMpElw _model_server_result.datetime_utc '2025-01-10 08:01:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o6l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 4O6L # _exptl.entry_id 4O6L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 503.035 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1R)-1-(2-chlorophenyl)propyl]-3-{4-[(1-methylpiperidin-4-yl)oxy]phenyl}-1H-indazole-5-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 133.14 _cell.angle_gamma 90 _cell.entry_id 4O6L _cell.length_a 153.232 _cell.length_b 70.26 _cell.length_c 106.889 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O6L _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 160 A ASP 674 1_555 A N TPO 161 A TPO 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C TPO 161 A TPO 675 1_555 A N TPO 162 A TPO 676 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C TPO 162 A TPO 676 1_555 A N SEP 163 A SEP 677 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C29 H31 Cl N4 O2' _chem_comp.formula_weight 503.035 _chem_comp.id 2QK _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1R)-1-(2-chlorophenyl)propyl]-3-{4-[(1-methylpiperidin-4-yl)oxy]phenyl}-1H-indazole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 N22 2QK sing 1 n n N22 C24 2QK sing 2 n n N22 C21 2QK sing 3 n n C24 C25 2QK sing 4 n n C25 C19 2QK sing 5 n n C21 C20 2QK sing 6 n n C20 C19 2QK sing 7 n n C19 O18 2QK sing 8 n n O18 C17 2QK sing 9 n n C17 C26 2QK doub 10 n y C17 C16 2QK sing 11 n y C26 C27 2QK sing 12 n y C16 C15 2QK doub 13 n y C01 C02 2QK sing 14 n n C27 C14 2QK doub 15 n y C15 C14 2QK sing 16 n y C14 C13 2QK sing 17 n n C02 C03 2QK sing 18 n n C03 N04 2QK sing 19 n n C03 C30 2QK sing 20 n n C13 C28 2QK sing 21 n y C13 N12 2QK doub 22 n y N04 C05 2QK sing 23 n n C29 C28 2QK doub 24 n y C29 C07 2QK sing 25 n y C28 C10 2QK sing 26 n y N12 N11 2QK sing 27 n y C30 C31 2QK doub 28 n y C30 C35 2QK sing 29 n y C05 C07 2QK sing 30 n n C05 O06 2QK doub 31 n n C31 C32 2QK sing 32 n y C07 C08 2QK doub 33 n y CL C35 2QK sing 34 n n C35 C34 2QK doub 35 n y C10 N11 2QK sing 36 n y C10 C09 2QK doub 37 n y C32 C33 2QK doub 38 n y C08 C09 2QK sing 39 n y C34 C33 2QK sing 40 n y C01 H1 2QK sing 41 n n C01 H2 2QK sing 42 n n C01 H3 2QK sing 43 n n C02 H4 2QK sing 44 n n C02 H5 2QK sing 45 n n C03 H6 2QK sing 46 n n N04 H7 2QK sing 47 n n C08 H8 2QK sing 48 n n C09 H9 2QK sing 49 n n N11 H10 2QK sing 50 n n C15 H11 2QK sing 51 n n C16 H12 2QK sing 52 n n C19 H13 2QK sing 53 n n C20 H14 2QK sing 54 n n C20 H15 2QK sing 55 n n C21 H16 2QK sing 56 n n C21 H17 2QK sing 57 n n C23 H19 2QK sing 58 n n C23 H20 2QK sing 59 n n C23 H21 2QK sing 60 n n C24 H22 2QK sing 61 n n C24 H23 2QK sing 62 n n C25 H24 2QK sing 63 n n C25 H25 2QK sing 64 n n C26 H26 2QK sing 65 n n C27 H27 2QK sing 66 n n C29 H28 2QK sing 67 n n C31 H29 2QK sing 68 n n C32 H30 2QK sing 69 n n C33 H31 2QK sing 70 n n C34 H32 2QK sing 71 n n # _atom_sites.entry_id 4O6L _atom_sites.fract_transf_matrix[1][1] 0.006526 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006115 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012821 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2QK A 1 1001 1001 2QK 498 . D 3 GOL A 1 1002 2 GOL GOL . E 2 2QK B 1 1001 1001 2QK 498 . F 3 GOL B 1 1002 1 GOL GOL . G 4 HOH A 1 1101 4 HOH HOH . G 4 HOH A 2 1102 6 HOH HOH . G 4 HOH A 3 1103 7 HOH HOH . G 4 HOH A 4 1104 9 HOH HOH . G 4 HOH A 5 1105 10 HOH HOH . G 4 HOH A 6 1106 11 HOH HOH . G 4 HOH A 7 1107 12 HOH HOH . G 4 HOH A 8 1108 13 HOH HOH . G 4 HOH A 9 1109 14 HOH HOH . G 4 HOH A 10 1110 15 HOH HOH . G 4 HOH A 11 1111 18 HOH HOH . G 4 HOH A 12 1112 20 HOH HOH . G 4 HOH A 13 1113 23 HOH HOH . G 4 HOH A 14 1114 24 HOH HOH . G 4 HOH A 15 1115 25 HOH HOH . G 4 HOH A 16 1116 26 HOH HOH . G 4 HOH A 17 1117 36 HOH HOH . G 4 HOH A 18 1118 38 HOH HOH . G 4 HOH A 19 1119 39 HOH HOH . G 4 HOH A 20 1120 61 HOH HOH . G 4 HOH A 21 1121 64 HOH HOH . G 4 HOH A 22 1122 69 HOH HOH . G 4 HOH A 23 1123 73 HOH HOH . G 4 HOH A 24 1124 82 HOH HOH . G 4 HOH A 25 1125 86 HOH HOH . G 4 HOH A 26 1126 93 HOH HOH . G 4 HOH A 27 1127 95 HOH HOH . G 4 HOH A 28 1128 101 HOH HOH . G 4 HOH A 29 1129 106 HOH HOH . G 4 HOH A 30 1130 107 HOH HOH . G 4 HOH A 31 1131 110 HOH HOH . G 4 HOH A 32 1132 114 HOH HOH . H 4 HOH B 1 1101 1 HOH HOH . H 4 HOH B 2 1102 2 HOH HOH . H 4 HOH B 3 1103 3 HOH HOH . H 4 HOH B 4 1104 5 HOH HOH . H 4 HOH B 5 1105 8 HOH HOH . H 4 HOH B 6 1106 27 HOH HOH . H 4 HOH B 7 1107 28 HOH HOH . H 4 HOH B 8 1108 29 HOH HOH . H 4 HOH B 9 1109 30 HOH HOH . H 4 HOH B 10 1110 31 HOH HOH . H 4 HOH B 11 1111 32 HOH HOH . H 4 HOH B 12 1112 37 HOH HOH . H 4 HOH B 13 1113 40 HOH HOH . H 4 HOH B 14 1114 41 HOH HOH . H 4 HOH B 15 1115 47 HOH HOH . H 4 HOH B 16 1116 53 HOH HOH . H 4 HOH B 17 1117 56 HOH HOH . H 4 HOH B 18 1118 58 HOH HOH . H 4 HOH B 19 1119 59 HOH HOH . H 4 HOH B 20 1120 63 HOH HOH . H 4 HOH B 21 1121 75 HOH HOH . H 4 HOH B 22 1122 77 HOH HOH . H 4 HOH B 23 1123 79 HOH HOH . H 4 HOH B 24 1124 80 HOH HOH . H 4 HOH B 25 1125 83 HOH HOH . H 4 HOH B 26 1126 88 HOH HOH . H 4 HOH B 27 1127 91 HOH HOH . H 4 HOH B 28 1128 92 HOH HOH . H 4 HOH B 29 1129 94 HOH HOH . H 4 HOH B 30 1130 97 HOH HOH . H 4 HOH B 31 1131 103 HOH HOH . H 4 HOH B 32 1132 104 HOH HOH . H 4 HOH B 33 1133 105 HOH HOH . H 4 HOH B 34 1134 108 HOH HOH . H 4 HOH B 35 1135 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 2QK . . . C 2 76.564 -4.608 19.173 1 58.92 ? C01 2QK 1001 A 1 HETATM 2 C C02 2QK . . . C 2 76.67 -4.988 20.658 1 54.21 ? C02 2QK 1001 A 1 HETATM 3 C C03 2QK . . . C 2 76.606 -3.793 21.55 1 43.16 ? C03 2QK 1001 A 1 HETATM 4 N N04 2QK . . . C 2 75.259 -3.359 21.91 1 45.23 ? N04 2QK 1001 A 1 HETATM 5 C C05 2QK . . . C 2 74.435 -3.881 22.966 1 40.67 ? C05 2QK 1001 A 1 HETATM 6 O O06 2QK . . . C 2 74.776 -4.814 23.671 1 42.21 ? O06 2QK 1001 A 1 HETATM 7 C C07 2QK . . . C 2 73.079 -3.226 23.209 1 38.17 ? C07 2QK 1001 A 1 HETATM 8 C C08 2QK . . . C 2 72.388 -3.497 24.419 1 41.22 ? C08 2QK 1001 A 1 HETATM 9 C C09 2QK . . . C 2 71.146 -2.888 24.676 1 36.06 ? C09 2QK 1001 A 1 HETATM 10 C C10 2QK . . . C 2 70.588 -1.996 23.699 1 35.56 ? C10 2QK 1001 A 1 HETATM 11 N N11 2QK . . . C 2 69.389 -1.282 23.702 1 32.55 ? N11 2QK 1001 A 1 HETATM 12 N N12 2QK . . . C 2 69.329 -0.562 22.515 1 38.73 ? N12 2QK 1001 A 1 HETATM 13 C C13 2QK . . . C 2 70.447 -0.808 21.783 1 33.37 ? C13 2QK 1001 A 1 HETATM 14 C C14 2QK . . . C 2 70.695 -0.207 20.496 1 36.11 ? C14 2QK 1001 A 1 HETATM 15 C C15 2QK . . . C 2 71.973 0.036 20.029 1 33.69 ? C15 2QK 1001 A 1 HETATM 16 C C16 2QK . . . C 2 72.163 0.647 18.782 1 37.52 ? C16 2QK 1001 A 1 HETATM 17 C C17 2QK . . . C 2 71.04 1.021 18.012 1 42.57 ? C17 2QK 1001 A 1 HETATM 18 O O18 2QK . . . C 2 71.231 1.636 16.782 1 41.12 ? O18 2QK 1001 A 1 HETATM 19 C C19 2QK . . . C 2 70.433 1.13 15.764 1 49.67 ? C19 2QK 1001 A 1 HETATM 20 C C20 2QK . . . C 2 70.838 -0.256 15.42 1 48.51 ? C20 2QK 1001 A 1 HETATM 21 C C21 2QK . . . C 2 72.199 -0.332 14.765 1 54.52 ? C21 2QK 1001 A 1 HETATM 22 N N22 2QK . . . C 2 72.574 0.789 13.857 1 65.65 ? N22 2QK 1001 A 1 HETATM 23 C C23 2QK . . . C 2 73.762 0.588 12.987 1 67.64 ? C23 2QK 1001 A 1 HETATM 24 C C24 2QK . . . C 2 72.011 2.129 14.196 1 51.86 ? C24 2QK 1001 A 1 HETATM 25 C C25 2QK . . . C 2 70.562 2.014 14.583 1 53.65 ? C25 2QK 1001 A 1 HETATM 26 C C26 2QK . . . C 2 69.766 0.803 18.488 1 43.39 ? C26 2QK 1001 A 1 HETATM 27 C C27 2QK . . . C 2 69.582 0.177 19.735 1 39.99 ? C27 2QK 1001 A 1 HETATM 28 C C28 2QK . . . C 2 71.278 -1.725 22.515 1 32.31 ? C28 2QK 1001 A 1 HETATM 29 C C29 2QK . . . C 2 72.554 -2.326 22.265 1 35.25 ? C29 2QK 1001 A 1 HETATM 30 C C30 2QK . . . C 2 77.568 -3.629 22.739 1 53.1 ? C30 2QK 1001 A 1 HETATM 31 C C31 2QK . . . C 2 77.81 -2.261 22.997 1 44.42 ? C31 2QK 1001 A 1 HETATM 32 C C32 2QK . . . C 2 78.664 -1.852 24.017 1 47.85 ? C32 2QK 1001 A 1 HETATM 33 C C33 2QK . . . C 2 79.279 -2.818 24.799 1 52.37 ? C33 2QK 1001 A 1 HETATM 34 C C34 2QK . . . C 2 79.053 -4.185 24.571 1 51.92 ? C34 2QK 1001 A 1 HETATM 35 C C35 2QK . . . C 2 78.202 -4.609 23.542 1 54.6 ? C35 2QK 1001 A 1 HETATM 36 CL CL 2QK . . . C 2 78.036 -6.334 23.395 1 58.87 ? CL 2QK 1001 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #