data_4O7B # _model_server_result.job_id 2JzzH9Eg-QX7umqrZd6aNw _model_server_result.datetime_utc '2024-11-22 00:07:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o7b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4O7B # _exptl.entry_id 4O7B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.516 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(2,3-dimethylphenoxy)-4-[4-(4-fluorophenyl)-1-(piperidin-4-yl)-1H-imidazol-5-yl]pyrimidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O7B _cell.length_a 37.448 _cell.length_b 43.967 _cell.length_c 78.885 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O7B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H26 F N5 O' _chem_comp.formula_weight 443.516 _chem_comp.id 2RJ _chem_comp.mon_nstd_flag . _chem_comp.name 2-(2,3-dimethylphenoxy)-4-[4-(4-fluorophenyl)-1-(piperidin-4-yl)-1H-imidazol-5-yl]pyrimidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 2RJ sing 1 n n C07 C02 2RJ doub 2 n y C07 C06 2RJ sing 3 n y C02 C03 2RJ sing 4 n y C24 N23 2RJ sing 5 n n C24 C25 2RJ sing 6 n n N23 C22 2RJ sing 7 n n C06 C05 2RJ doub 8 n y C25 C20 2RJ sing 9 n n C03 C33 2RJ sing 10 n n C03 C04 2RJ doub 11 n y C22 C21 2RJ sing 12 n n C05 C04 2RJ sing 13 n y C04 O08 2RJ sing 14 n n C20 C21 2RJ sing 15 n n C20 N19 2RJ sing 16 n n O08 C09 2RJ sing 17 n n N19 C18 2RJ sing 18 n y N19 C15 2RJ sing 19 n y C18 N17 2RJ doub 20 n y N14 C09 2RJ doub 21 n y N14 C13 2RJ sing 22 n y C09 N10 2RJ sing 23 n y N17 C16 2RJ sing 24 n y C15 C13 2RJ sing 25 n n C15 C16 2RJ doub 26 n y C13 C12 2RJ doub 27 n y C16 C26 2RJ sing 28 n n N10 C11 2RJ doub 29 n y C26 C31 2RJ doub 30 n y C26 C27 2RJ sing 31 n y C12 C11 2RJ sing 32 n y C31 C30 2RJ sing 33 n y C27 C28 2RJ doub 34 n y C30 C29 2RJ doub 35 n y C28 C29 2RJ sing 36 n y C29 F32 2RJ sing 37 n n C01 H011 2RJ sing 38 n n C01 H013 2RJ sing 39 n n C01 H012 2RJ sing 40 n n C05 H051 2RJ sing 41 n n C06 H061 2RJ sing 42 n n C07 H071 2RJ sing 43 n n C11 H111 2RJ sing 44 n n C12 H121 2RJ sing 45 n n C18 H181 2RJ sing 46 n n C20 H201 2RJ sing 47 n n C21 H212 2RJ sing 48 n n C21 H211 2RJ sing 49 n n C22 H222 2RJ sing 50 n n C22 H221 2RJ sing 51 n n N23 H231 2RJ sing 52 n n C24 H241 2RJ sing 53 n n C24 H242 2RJ sing 54 n n C25 H251 2RJ sing 55 n n C25 H252 2RJ sing 56 n n C27 H271 2RJ sing 57 n n C28 H281 2RJ sing 58 n n C30 H301 2RJ sing 59 n n C31 H311 2RJ sing 60 n n C33 H333 2RJ sing 61 n n C33 H332 2RJ sing 62 n n C33 H331 2RJ sing 63 n n # _atom_sites.entry_id 4O7B _atom_sites.fract_transf_matrix[1][1] 0.026704 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012677 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2RJ A 1 201 1 2RJ LIG . C 3 EDO A 1 202 1 EDO EDO . D 3 EDO A 1 203 3 EDO EDO . E 3 EDO A 1 204 4 EDO EDO . F 4 HOH A 1 301 1 HOH HOH . F 4 HOH A 2 302 2 HOH HOH . F 4 HOH A 3 303 3 HOH HOH . F 4 HOH A 4 304 4 HOH HOH . F 4 HOH A 5 305 5 HOH HOH . F 4 HOH A 6 306 6 HOH HOH . F 4 HOH A 7 307 7 HOH HOH . F 4 HOH A 8 308 8 HOH HOH . F 4 HOH A 9 309 9 HOH HOH . F 4 HOH A 10 310 10 HOH HOH . F 4 HOH A 11 311 11 HOH HOH . F 4 HOH A 12 312 12 HOH HOH . F 4 HOH A 13 313 13 HOH HOH . F 4 HOH A 14 314 14 HOH HOH . F 4 HOH A 15 315 15 HOH HOH . F 4 HOH A 16 316 16 HOH HOH . F 4 HOH A 17 317 17 HOH HOH . F 4 HOH A 18 318 18 HOH HOH . F 4 HOH A 19 319 19 HOH HOH . F 4 HOH A 20 320 20 HOH HOH . F 4 HOH A 21 321 21 HOH HOH . F 4 HOH A 22 322 22 HOH HOH . F 4 HOH A 23 323 23 HOH HOH . F 4 HOH A 24 324 24 HOH HOH . F 4 HOH A 25 325 25 HOH HOH . F 4 HOH A 26 326 26 HOH HOH . F 4 HOH A 27 327 27 HOH HOH . F 4 HOH A 28 328 28 HOH HOH . F 4 HOH A 29 329 29 HOH HOH . F 4 HOH A 30 330 30 HOH HOH . F 4 HOH A 31 331 31 HOH HOH . F 4 HOH A 32 332 32 HOH HOH . F 4 HOH A 33 333 33 HOH HOH . F 4 HOH A 34 334 34 HOH HOH . F 4 HOH A 35 335 35 HOH HOH . F 4 HOH A 36 336 36 HOH HOH . F 4 HOH A 37 337 37 HOH HOH . F 4 HOH A 38 338 38 HOH HOH . F 4 HOH A 39 339 39 HOH HOH . F 4 HOH A 40 340 40 HOH HOH . F 4 HOH A 41 341 41 HOH HOH . F 4 HOH A 42 342 42 HOH HOH . F 4 HOH A 43 343 43 HOH HOH . F 4 HOH A 44 344 44 HOH HOH . F 4 HOH A 45 345 45 HOH HOH . F 4 HOH A 46 346 46 HOH HOH . F 4 HOH A 47 347 47 HOH HOH . F 4 HOH A 48 348 48 HOH HOH . F 4 HOH A 49 349 49 HOH HOH . F 4 HOH A 50 350 50 HOH HOH . F 4 HOH A 51 351 51 HOH HOH . F 4 HOH A 52 352 52 HOH HOH . F 4 HOH A 53 353 53 HOH HOH . F 4 HOH A 54 354 54 HOH HOH . F 4 HOH A 55 355 55 HOH HOH . F 4 HOH A 56 356 56 HOH HOH . F 4 HOH A 57 357 57 HOH HOH . F 4 HOH A 58 358 58 HOH HOH . F 4 HOH A 59 359 59 HOH HOH . F 4 HOH A 60 360 60 HOH HOH . F 4 HOH A 61 361 61 HOH HOH . F 4 HOH A 62 362 62 HOH HOH . F 4 HOH A 63 363 63 HOH HOH . F 4 HOH A 64 364 64 HOH HOH . F 4 HOH A 65 365 65 HOH HOH . F 4 HOH A 66 366 66 HOH HOH . F 4 HOH A 67 367 67 HOH HOH . F 4 HOH A 68 368 68 HOH HOH . F 4 HOH A 69 369 69 HOH HOH . F 4 HOH A 70 370 70 HOH HOH . F 4 HOH A 71 371 71 HOH HOH . F 4 HOH A 72 372 72 HOH HOH . F 4 HOH A 73 373 73 HOH HOH . F 4 HOH A 74 374 74 HOH HOH . F 4 HOH A 75 375 75 HOH HOH . F 4 HOH A 76 376 76 HOH HOH . F 4 HOH A 77 377 77 HOH HOH . F 4 HOH A 78 378 78 HOH HOH . F 4 HOH A 79 379 79 HOH HOH . F 4 HOH A 80 380 80 HOH HOH . F 4 HOH A 81 381 81 HOH HOH . F 4 HOH A 82 382 82 HOH HOH . F 4 HOH A 83 383 83 HOH HOH . F 4 HOH A 84 384 84 HOH HOH . F 4 HOH A 85 385 85 HOH HOH . F 4 HOH A 86 386 86 HOH HOH . F 4 HOH A 87 387 87 HOH HOH . F 4 HOH A 88 388 88 HOH HOH . F 4 HOH A 89 389 89 HOH HOH . F 4 HOH A 90 390 90 HOH HOH . F 4 HOH A 91 391 91 HOH HOH . F 4 HOH A 92 392 92 HOH HOH . F 4 HOH A 93 393 93 HOH HOH . F 4 HOH A 94 394 94 HOH HOH . F 4 HOH A 95 395 95 HOH HOH . F 4 HOH A 96 396 96 HOH HOH . F 4 HOH A 97 397 97 HOH HOH . F 4 HOH A 98 398 98 HOH HOH . F 4 HOH A 99 399 99 HOH HOH . F 4 HOH A 100 400 100 HOH HOH . F 4 HOH A 101 401 101 HOH HOH . F 4 HOH A 102 402 102 HOH HOH . F 4 HOH A 103 403 103 HOH HOH . F 4 HOH A 104 404 104 HOH HOH . F 4 HOH A 105 405 105 HOH HOH . F 4 HOH A 106 406 106 HOH HOH . F 4 HOH A 107 407 107 HOH HOH . F 4 HOH A 108 408 108 HOH HOH . F 4 HOH A 109 409 109 HOH HOH . F 4 HOH A 110 410 110 HOH HOH . F 4 HOH A 111 411 111 HOH HOH . F 4 HOH A 112 412 112 HOH HOH . F 4 HOH A 113 413 113 HOH HOH . F 4 HOH A 114 414 114 HOH HOH . F 4 HOH A 115 415 115 HOH HOH . F 4 HOH A 116 416 116 HOH HOH . F 4 HOH A 117 417 117 HOH HOH . F 4 HOH A 118 418 118 HOH HOH . F 4 HOH A 119 419 119 HOH HOH . F 4 HOH A 120 420 120 HOH HOH . F 4 HOH A 121 421 121 HOH HOH . F 4 HOH A 122 422 122 HOH HOH . F 4 HOH A 123 423 123 HOH HOH . F 4 HOH A 124 424 124 HOH HOH . F 4 HOH A 125 425 125 HOH HOH . F 4 HOH A 126 426 126 HOH HOH . F 4 HOH A 127 427 127 HOH HOH . F 4 HOH A 128 428 128 HOH HOH . F 4 HOH A 129 429 129 HOH HOH . F 4 HOH A 130 430 130 HOH HOH . F 4 HOH A 131 431 131 HOH HOH . F 4 HOH A 132 432 132 HOH HOH . F 4 HOH A 133 433 133 HOH HOH . F 4 HOH A 134 434 134 HOH HOH . F 4 HOH A 135 435 135 HOH HOH . F 4 HOH A 136 436 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 2RJ . . . B 2 121.747 -5.535 -6.615 1 19.78 ? C01 2RJ 201 A 1 HETATM 2 C C02 2RJ . . . B 2 121.476 -6.546 -5.564 1 18.87 ? C02 2RJ 201 A 1 HETATM 3 C C03 2RJ . . . B 2 121.123 -6.248 -4.207 1 17.91 ? C03 2RJ 201 A 1 HETATM 4 C C04 2RJ . . . B 2 120.92 -7.322 -3.303 1 17.09 ? C04 2RJ 201 A 1 HETATM 5 C C05 2RJ . . . B 2 121.035 -8.667 -3.725 1 18.22 ? C05 2RJ 201 A 1 HETATM 6 C C06 2RJ . . . B 2 121.396 -8.938 -5.042 1 19.83 ? C06 2RJ 201 A 1 HETATM 7 C C07 2RJ . . . B 2 121.599 -7.892 -5.949 1 19.78 ? C07 2RJ 201 A 1 HETATM 8 O O08 2RJ . . . B 2 120.519 -7.097 -2.015 1 13.97 ? O08 2RJ 201 A 1 HETATM 9 C C09 2RJ . . . B 2 121.45 -6.832 -1.067 1 13.36 ? C09 2RJ 201 A 1 HETATM 10 N N10 2RJ . . . B 2 121.06 -6.837 0.223 1 13.72 ? N10 2RJ 201 A 1 HETATM 11 C C11 2RJ . . . B 2 121.945 -6.583 1.224 1 12.92 ? C11 2RJ 201 A 1 HETATM 12 C C12 2RJ . . . B 2 123.285 -6.35 0.907 1 12.63 ? C12 2RJ 201 A 1 HETATM 13 C C13 2RJ . . . B 2 123.678 -6.326 -0.465 1 12.05 ? C13 2RJ 201 A 1 HETATM 14 N N14 2RJ . . . B 2 122.731 -6.593 -1.404 1 12.38 ? N14 2RJ 201 A 1 HETATM 15 C C15 2RJ . . . B 2 125.032 -6.111 -0.861 1 11.96 ? C15 2RJ 201 A 1 HETATM 16 C C16 2RJ . . . B 2 125.996 -5.291 -0.24 1 12.18 ? C16 2RJ 201 A 1 HETATM 17 N N17 2RJ . . . B 2 127.165 -5.402 -0.898 1 12.31 ? N17 2RJ 201 A 1 HETATM 18 C C18 2RJ . . . B 2 126.959 -6.276 -1.887 1 12.76 ? C18 2RJ 201 A 1 HETATM 19 N N19 2RJ . . . B 2 125.684 -6.723 -1.899 1 14.14 ? N19 2RJ 201 A 1 HETATM 20 C C20 2RJ . . . B 2 125.179 -7.691 -2.86 1 16.76 ? C20 2RJ 201 A 1 HETATM 21 C C21 2RJ . . . B 2 125.672 -9.145 -2.66 1 19.26 ? C21 2RJ 201 A 1 HETATM 22 C C22 2RJ . . . B 2 125.131 -10.073 -3.775 1 19.04 ? C22 2RJ 201 A 1 HETATM 23 N N23 2RJ . . . B 2 125.521 -9.582 -5.113 1 18.84 ? N23 2RJ 201 A 1 HETATM 24 C C24 2RJ . . . B 2 125.036 -8.211 -5.371 1 18.33 ? C24 2RJ 201 A 1 HETATM 25 C C25 2RJ . . . B 2 125.527 -7.201 -4.299 1 17.83 ? C25 2RJ 201 A 1 HETATM 26 C C26 2RJ . . . B 2 125.918 -4.368 0.83 1 12.57 ? C26 2RJ 201 A 1 HETATM 27 C C27 2RJ . . . B 2 127.089 -4.018 1.531 1 13.61 ? C27 2RJ 201 A 1 HETATM 28 C C28 2RJ . . . B 2 127.043 -3.073 2.553 1 13.56 ? C28 2RJ 201 A 1 HETATM 29 C C29 2RJ . . . B 2 125.836 -2.434 2.887 1 14.71 ? C29 2RJ 201 A 1 HETATM 30 C C30 2RJ . . . B 2 124.665 -2.751 2.19 1 14.35 ? C30 2RJ 201 A 1 HETATM 31 C C31 2RJ . . . B 2 124.718 -3.696 1.151 1 13.79 ? C31 2RJ 201 A 1 HETATM 32 F F32 2RJ . . . B 2 125.813 -1.554 3.86 1 17.27 ? F32 2RJ 201 A 1 HETATM 33 C C33 2RJ . . . B 2 120.967 -4.856 -3.716 1 18.25 ? C33 2RJ 201 A 1 HETATM 34 H H011 2RJ . . . B 2 121.197 -5.729 -7.406 1 23.74 ? H011 2RJ 201 A 1 HETATM 35 H H013 2RJ . . . B 2 122.698 -5.566 -6.862 1 23.74 ? H013 2RJ 201 A 1 HETATM 36 H H012 2RJ . . . B 2 121.526 -4.64 -6.274 1 23.74 ? H012 2RJ 201 A 1 HETATM 37 H H051 2RJ . . . B 2 120.876 -9.4 -3.094 1 21.86 ? H051 2RJ 201 A 1 HETATM 38 H H061 2RJ . . . B 2 121.485 -9.868 -5.341 1 23.79 ? H061 2RJ 201 A 1 HETATM 39 H H071 2RJ . . . B 2 121.862 -8.103 -6.87 1 23.73 ? H071 2RJ 201 A 1 HETATM 40 H H111 2RJ . . . B 2 121.65 -6.588 2.159 1 15.51 ? H111 2RJ 201 A 1 HETATM 41 H H121 2RJ . . . B 2 123.937 -6.16 1.613 1 15.15 ? H121 2RJ 201 A 1 HETATM 42 H H181 2RJ . . . B 2 127.645 -6.547 -2.535 1 15.31 ? H181 2RJ 201 A 1 HETATM 43 H H201 2RJ . . . B 2 124.201 -7.706 -2.775 1 20.11 ? H201 2RJ 201 A 1 HETATM 44 H H212 2RJ . . . B 2 126.655 -9.159 -2.679 1 23.11 ? H212 2RJ 201 A 1 HETATM 45 H H211 2RJ . . . B 2 125.361 -9.474 -1.787 1 23.11 ? H211 2RJ 201 A 1 HETATM 46 H H222 2RJ . . . B 2 124.15 -10.111 -3.717 1 22.84 ? H222 2RJ 201 A 1 HETATM 47 H H221 2RJ . . . B 2 125.497 -10.977 -3.645 1 22.84 ? H221 2RJ 201 A 1 HETATM 48 H H231 2RJ . . . B 2 126.451 -9.606 -5.197 1 22.61 ? H231 2RJ 201 A 1 HETATM 49 H H241 2RJ . . . B 2 125.358 -7.92 -6.254 1 22 ? H241 2RJ 201 A 1 HETATM 50 H H242 2RJ . . . B 2 124.053 -8.218 -5.376 1 22 ? H242 2RJ 201 A 1 HETATM 51 H H251 2RJ . . . B 2 125.064 -6.348 -4.45 1 21.4 ? H251 2RJ 201 A 1 HETATM 52 H H252 2RJ . . . B 2 126.506 -7.144 -4.368 1 21.4 ? H252 2RJ 201 A 1 HETATM 53 H H271 2RJ . . . B 2 127.939 -4.454 1.308 1 16.33 ? H271 2RJ 201 A 1 HETATM 54 H H281 2RJ . . . B 2 127.861 -2.856 3.049 1 16.27 ? H281 2RJ 201 A 1 HETATM 55 H H301 2RJ . . . B 2 123.819 -2.31 2.416 1 17.22 ? H301 2RJ 201 A 1 HETATM 56 H H311 2RJ . . . B 2 123.898 -3.918 0.663 1 16.55 ? H311 2RJ 201 A 1 HETATM 57 H H333 2RJ . . . B 2 121.371 -4.234 -4.36 1 21.9 ? H333 2RJ 201 A 1 HETATM 58 H H332 2RJ . . . B 2 120.011 -4.649 -3.617 1 21.9 ? H332 2RJ 201 A 1 HETATM 59 H H331 2RJ . . . B 2 121.414 -4.763 -2.846 1 21.9 ? H331 2RJ 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 59 #