data_4O7G
#
_model_server_result.job_id            KthrYlmSJfsnhcfWLhTNoA 
_model_server_result.datetime_utc      '2025-02-26 22:00:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4o7g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":302}' 
#
_entry.id    4O7G 
#
_exptl.entry_id    4O7G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4O7G 
_cell.length_a            73.186 
_cell.length_b            108.705 
_cell.length_c            111.762 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4O7G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 51 A HIS 51 1_555 C FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc2 A NE2 HIS 84 A HIS 84 1_555 D FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
metalc ? metalc3 A NE2 HIS 118 A HIS 118 1_555 C FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc4 A NE2 HIS 157 A HIS 157 1_555 D FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc5 B NE2 HIS 51 B HIS 51 1_555 G FE HEM . B HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc6 B NE2 HIS 84 B HIS 84 1_555 H FE HEM . B HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
metalc ? metalc7 B NE2 HIS 118 B HIS 118 1_555 G FE HEM . B HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc8 B NE2 HIS 157 B HIS 157 1_555 H FE HEM . B HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 149 n n 
CHA C4D HEM doub 150 n n 
CHA HHA HEM sing 151 n n 
CHB C4A HEM sing 152 n n 
CHB C1B HEM doub 153 n n 
CHB HHB HEM sing 154 n n 
CHC C4B HEM sing 155 n n 
CHC C1C HEM doub 156 n n 
CHC HHC HEM sing 157 n n 
CHD C4C HEM doub 158 n n 
CHD C1D HEM sing 159 n n 
CHD HHD HEM sing 160 n n 
C1A C2A HEM doub 161 n y 
C1A NA HEM sing 162 n y 
C2A C3A HEM sing 163 n y 
C2A CAA HEM sing 164 n n 
C3A C4A HEM doub 165 n y 
C3A CMA HEM sing 166 n n 
C4A NA HEM sing 167 n y 
CMA HMA HEM sing 168 n n 
CMA HMAA HEM sing 169 n n 
CMA HMAB HEM sing 170 n n 
CAA CBA HEM sing 171 n n 
CAA HAA HEM sing 172 n n 
CAA HAAA HEM sing 173 n n 
CBA CGA HEM sing 174 n n 
CBA HBA HEM sing 175 n n 
CBA HBAA HEM sing 176 n n 
CGA O1A HEM doub 177 n n 
CGA O2A HEM sing 178 n n 
C1B C2B HEM sing 179 n n 
C1B NB HEM sing 180 n n 
C2B C3B HEM doub 181 n n 
C2B CMB HEM sing 182 n n 
C3B C4B HEM sing 183 n n 
C3B CAB HEM sing 184 n n 
C4B NB HEM doub 185 n n 
CMB HMB HEM sing 186 n n 
CMB HMBA HEM sing 187 n n 
CMB HMBB HEM sing 188 n n 
CAB CBB HEM doub 189 n n 
CAB HAB HEM sing 190 n n 
CBB HBB HEM sing 191 n n 
CBB HBBA HEM sing 192 n n 
C1C C2C HEM sing 193 n y 
C1C NC HEM sing 194 n y 
C2C C3C HEM doub 195 n y 
C2C CMC HEM sing 196 n n 
C3C C4C HEM sing 197 n y 
C3C CAC HEM sing 198 n n 
C4C NC HEM sing 199 n y 
CMC HMC HEM sing 200 n n 
CMC HMCA HEM sing 201 n n 
CMC HMCB HEM sing 202 n n 
CAC CBC HEM doub 203 n n 
CAC HAC HEM sing 204 n n 
CBC HBC HEM sing 205 n n 
CBC HBCA HEM sing 206 n n 
C1D C2D HEM sing 207 n n 
C1D ND HEM doub 208 n n 
C2D C3D HEM doub 209 n n 
C2D CMD HEM sing 210 n n 
C3D C4D HEM sing 211 n n 
C3D CAD HEM sing 212 n n 
C4D ND HEM sing 213 n n 
CMD HMD HEM sing 214 n n 
CMD HMDA HEM sing 215 n n 
CMD HMDB HEM sing 216 n n 
CAD CBD HEM sing 217 n n 
CAD HAD HEM sing 218 n n 
CAD HADA HEM sing 219 n n 
CBD CGD HEM sing 220 n n 
CBD HBD HEM sing 221 n n 
CBD HBDA HEM sing 222 n n 
CGD O1D HEM doub 223 n n 
CGD O2D HEM sing 224 n n 
O2A H2A HEM sing 225 n n 
O2D H2D HEM sing 226 n n 
FE NA HEM sing 227 n n 
FE NB HEM sing 228 n n 
FE NC HEM sing 229 n n 
FE ND HEM sing 230 n n 
#
_atom_sites.entry_id                     4O7G 
_atom_sites.fract_transf_matrix[1][1]    0.013664 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009199 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008948 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 301 1 HEM HEM . 
D 2 HEM A 1 302 2 HEM HEM . 
E 3 ASC A 1 303 3 ASC ASC . 
F 4 SO4 A 1 304 1 SO4 SO4 . 
G 2 HEM B 1 301 3 HEM HEM . 
H 2 HEM B 1 302 4 HEM HEM . 
I 3 ASC B 1 303 1 ASC ASC . 
J 3 ASC B 1 304 2 ASC ASC . 
K 5 HOH A 1 401 1 HOH HOH . 
K 5 HOH A 2 402 7 HOH HOH . 
K 5 HOH A 3 403 9 HOH HOH . 
K 5 HOH A 4 404 11 HOH HOH . 
K 5 HOH A 5 405 13 HOH HOH . 
K 5 HOH A 6 406 16 HOH HOH . 
K 5 HOH A 7 407 17 HOH HOH . 
K 5 HOH A 8 408 18 HOH HOH . 
K 5 HOH A 9 409 20 HOH HOH . 
K 5 HOH A 10 410 21 HOH HOH . 
K 5 HOH A 11 411 22 HOH HOH . 
K 5 HOH A 12 412 23 HOH HOH . 
K 5 HOH A 13 413 24 HOH HOH . 
K 5 HOH A 14 414 27 HOH HOH . 
K 5 HOH A 15 415 29 HOH HOH . 
K 5 HOH A 16 416 30 HOH HOH . 
K 5 HOH A 17 417 32 HOH HOH . 
K 5 HOH A 18 418 33 HOH HOH . 
K 5 HOH A 19 419 34 HOH HOH . 
K 5 HOH A 20 420 35 HOH HOH . 
K 5 HOH A 21 421 37 HOH HOH . 
K 5 HOH A 22 422 38 HOH HOH . 
K 5 HOH A 23 423 41 HOH HOH . 
K 5 HOH A 24 424 47 HOH HOH . 
K 5 HOH A 25 425 48 HOH HOH . 
L 5 HOH B 1 401 2 HOH HOH . 
L 5 HOH B 2 402 3 HOH HOH . 
L 5 HOH B 3 403 4 HOH HOH . 
L 5 HOH B 4 404 5 HOH HOH . 
L 5 HOH B 5 405 6 HOH HOH . 
L 5 HOH B 6 406 8 HOH HOH . 
L 5 HOH B 7 407 10 HOH HOH . 
L 5 HOH B 8 408 12 HOH HOH . 
L 5 HOH B 9 409 14 HOH HOH . 
L 5 HOH B 10 410 15 HOH HOH . 
L 5 HOH B 11 411 19 HOH HOH . 
L 5 HOH B 12 412 25 HOH HOH . 
L 5 HOH B 13 413 26 HOH HOH . 
L 5 HOH B 14 414 28 HOH HOH . 
L 5 HOH B 15 415 31 HOH HOH . 
L 5 HOH B 16 416 36 HOH HOH . 
L 5 HOH B 17 417 39 HOH HOH . 
L 5 HOH B 18 418 40 HOH HOH . 
L 5 HOH B 19 419 42 HOH HOH . 
L 5 HOH B 20 420 43 HOH HOH . 
L 5 HOH B 21 421 45 HOH HOH . 
L 5 HOH B 22 422 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . H 2 -18.554 39.986 9.414 1 44.89 ? CHA HEM 302 B 1 
HETATM 2 C CHB HEM . . . H 2 -18.867 35.319 10.818 1 42.54 ? CHB HEM 302 B 1 
HETATM 3 C CHC HEM . . . H 2 -21.86 34.565 7.042 1 44.4 ? CHC HEM 302 B 1 
HETATM 4 C CHD HEM . . . H 2 -21.918 39.307 5.959 1 51.21 ? CHD HEM 302 B 1 
HETATM 5 C C1A HEM . . . H 2 -18.338 38.772 10.054 1 48.54 ? C1A HEM 302 B 1 
HETATM 6 C C2A HEM . . . H 2 -17.362 38.558 11.103 1 44.18 ? C2A HEM 302 B 1 
HETATM 7 C C3A HEM . . . H 2 -17.429 37.285 11.501 1 40.14 ? C3A HEM 302 B 1 
HETATM 8 C C4A HEM . . . H 2 -18.471 36.637 10.724 1 44.34 ? C4A HEM 302 B 1 
HETATM 9 C CMA HEM . . . H 2 -16.584 36.599 12.602 1 38.8 ? CMA HEM 302 B 1 
HETATM 10 C CAA HEM . . . H 2 -16.411 39.662 11.616 1 49.61 ? CAA HEM 302 B 1 
HETATM 11 C CBA HEM . . . H 2 -15.326 39.844 10.562 1 48.33 ? CBA HEM 302 B 1 
HETATM 12 C CGA HEM . . . H 2 -14.522 41.094 10.818 1 60.71 ? CGA HEM 302 B 1 
HETATM 13 O O1A HEM . . . H 2 -13.656 41.413 9.969 1 56.53 ? O1A HEM 302 B 1 
HETATM 14 O O2A HEM . . . H 2 -14.742 41.769 11.853 1 71.99 ? O2A HEM 302 B 1 
HETATM 15 C C1B HEM . . . H 2 -19.693 34.704 9.893 1 45.96 ? C1B HEM 302 B 1 
HETATM 16 C C2B HEM . . . H 2 -19.999 33.295 9.841 1 41.99 ? C2B HEM 302 B 1 
HETATM 17 C C3B HEM . . . H 2 -20.844 33.079 8.81 1 45.49 ? C3B HEM 302 B 1 
HETATM 18 C C4B HEM . . . H 2 -21.077 34.354 8.16 1 42.14 ? C4B HEM 302 B 1 
HETATM 19 C CMB HEM . . . H 2 -19.438 32.267 10.85 1 35.95 ? CMB HEM 302 B 1 
HETATM 20 C CAB HEM . . . H 2 -21.431 31.726 8.312 1 47.79 ? CAB HEM 302 B 1 
HETATM 21 C CBB HEM . . . H 2 -21.648 30.684 9.434 1 42.39 ? CBB HEM 302 B 1 
HETATM 22 C C1C HEM . . . H 2 -22.117 35.763 6.422 1 44.63 ? C1C HEM 302 B 1 
HETATM 23 C C2C HEM . . . H 2 -23.051 35.977 5.324 1 47.44 ? C2C HEM 302 B 1 
HETATM 24 C C3C HEM . . . H 2 -22.955 37.269 4.957 1 40.16 ? C3C HEM 302 B 1 
HETATM 25 C C4C HEM . . . H 2 -22.13 37.94 5.93 1 50.58 ? C4C HEM 302 B 1 
HETATM 26 C CMC HEM . . . H 2 -23.669 34.83 4.488 1 44.66 ? CMC HEM 302 B 1 
HETATM 27 C CAC HEM . . . H 2 -23.65 38.023 3.779 1 52.83 ? CAC HEM 302 B 1 
HETATM 28 C CBC HEM . . . H 2 -25.182 37.886 3.764 1 69.72 ? CBC HEM 302 B 1 
HETATM 29 C C1D HEM . . . H 2 -21.052 39.973 6.785 1 48.29 ? C1D HEM 302 B 1 
HETATM 30 C C2D HEM . . . H 2 -20.809 41.388 6.794 1 50.86 ? C2D HEM 302 B 1 
HETATM 31 C C3D HEM . . . H 2 -19.747 41.605 7.881 1 48.26 ? C3D HEM 302 B 1 
HETATM 32 C C4D HEM . . . H 2 -19.464 40.292 8.419 1 46.35 ? C4D HEM 302 B 1 
HETATM 33 C CMD HEM . . . H 2 -21.477 42.457 5.901 1 51.25 ? CMD HEM 302 B 1 
HETATM 34 C CAD HEM . . . H 2 -19.127 42.951 8.299 1 55.34 ? CAD HEM 302 B 1 
HETATM 35 C CBD HEM . . . H 2 -17.871 43.211 7.469 1 61.17 ? CBD HEM 302 B 1 
HETATM 36 C CGD HEM . . . H 2 -17.052 44.319 8.098 1 61.83 ? CGD HEM 302 B 1 
HETATM 37 O O1D HEM . . . H 2 -16.613 45.232 7.35 1 65.67 ? O1D HEM 302 B 1 
HETATM 38 O O2D HEM . . . H 2 -16.852 44.308 9.342 1 65.77 ? O2D HEM 302 B 1 
HETATM 39 N NA HEM . . . H 2 -19.002 37.569 9.851 1 40.82 ? NA HEM 302 B 1 
HETATM 40 N NB HEM . . . H 2 -20.372 35.324 8.853 1 44.85 ? NB HEM 302 B 1 
HETATM 41 N NC HEM . . . H 2 -21.631 36.995 6.813 1 49.16 ? NC HEM 302 B 1 
HETATM 42 N ND HEM . . . H 2 -20.25 39.371 7.739 1 43.15 ? ND HEM 302 B 1 
HETATM 43 FE FE HEM . . . H 2 -20.265 37.341 8.273 1 43.39 ? FE HEM 302 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           43 
#