data_4O7N # _model_server_result.job_id khmHANJs-pmBjexTTyCX5w _model_server_result.datetime_utc '2025-01-02 18:39:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o7n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4O7N # _exptl.entry_id 4O7N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O7N _cell.length_a 44.1 _cell.length_b 154.5 _cell.length_c 78.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O7N _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -39.205 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E O1B ADP . A ADP 304 1_555 F MG MG . A MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc2 E O2A ADP . A ADP 304 1_555 F MG MG . A MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc3 F MG MG . A MG 305 1_555 G O HOH . A HOH 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4O7N _atom_sites.fract_transf_matrix[1][1] 0.022676 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006472 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012753 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 301 500 PO4 PO4 . C 2 PO4 A 1 302 501 PO4 PO4 . D 3 ACT A 1 303 502 ACT ACT . E 4 ADP A 1 304 430 ADP ADP . F 5 MG A 1 305 505 MG MG . G 6 HOH A 1 401 300 HOH HOH . G 6 HOH A 2 402 301 HOH HOH . G 6 HOH A 3 403 302 HOH HOH . G 6 HOH A 4 404 303 HOH HOH . G 6 HOH A 5 405 304 HOH HOH . G 6 HOH A 6 406 305 HOH HOH . G 6 HOH A 7 407 306 HOH HOH . G 6 HOH A 8 408 307 HOH HOH . G 6 HOH A 9 409 308 HOH HOH . G 6 HOH A 10 410 309 HOH HOH . G 6 HOH A 11 411 310 HOH HOH . G 6 HOH A 12 412 311 HOH HOH . G 6 HOH A 13 413 312 HOH HOH . G 6 HOH A 14 414 313 HOH HOH . G 6 HOH A 15 415 314 HOH HOH . G 6 HOH A 16 416 315 HOH HOH . G 6 HOH A 17 417 316 HOH HOH . G 6 HOH A 18 418 317 HOH HOH . G 6 HOH A 19 419 318 HOH HOH . G 6 HOH A 20 420 319 HOH HOH . G 6 HOH A 21 421 320 HOH HOH . G 6 HOH A 22 422 322 HOH HOH . G 6 HOH A 23 423 323 HOH HOH . G 6 HOH A 24 424 324 HOH HOH . G 6 HOH A 25 425 325 HOH HOH . G 6 HOH A 26 426 326 HOH HOH . G 6 HOH A 27 427 327 HOH HOH . G 6 HOH A 28 428 328 HOH HOH . G 6 HOH A 29 429 329 HOH HOH . G 6 HOH A 30 430 330 HOH HOH . G 6 HOH A 31 431 331 HOH HOH . G 6 HOH A 32 432 332 HOH HOH . G 6 HOH A 33 433 333 HOH HOH . G 6 HOH A 34 434 334 HOH HOH . G 6 HOH A 35 435 335 HOH HOH . G 6 HOH A 36 436 336 HOH HOH . G 6 HOH A 37 437 337 HOH HOH . G 6 HOH A 38 438 338 HOH HOH . G 6 HOH A 39 439 339 HOH HOH . G 6 HOH A 40 440 340 HOH HOH . G 6 HOH A 41 441 341 HOH HOH . G 6 HOH A 42 442 342 HOH HOH . G 6 HOH A 43 443 343 HOH HOH . G 6 HOH A 44 444 344 HOH HOH . G 6 HOH A 45 445 345 HOH HOH . G 6 HOH A 46 446 346 HOH HOH . G 6 HOH A 47 447 347 HOH HOH . G 6 HOH A 48 448 348 HOH HOH . G 6 HOH A 49 449 349 HOH HOH . G 6 HOH A 50 450 350 HOH HOH . G 6 HOH A 51 451 351 HOH HOH . G 6 HOH A 52 452 352 HOH HOH . G 6 HOH A 53 453 353 HOH HOH . G 6 HOH A 54 454 354 HOH HOH . G 6 HOH A 55 455 355 HOH HOH . G 6 HOH A 56 456 356 HOH HOH . G 6 HOH A 57 457 357 HOH HOH . G 6 HOH A 58 458 358 HOH HOH . G 6 HOH A 59 459 359 HOH HOH . G 6 HOH A 60 460 360 HOH HOH . G 6 HOH A 61 461 361 HOH HOH . G 6 HOH A 62 462 362 HOH HOH . G 6 HOH A 63 463 363 HOH HOH . G 6 HOH A 64 464 364 HOH HOH . G 6 HOH A 65 465 365 HOH HOH . G 6 HOH A 66 466 366 HOH HOH . G 6 HOH A 67 467 367 HOH HOH . G 6 HOH A 68 468 368 HOH HOH . G 6 HOH A 69 469 369 HOH HOH . G 6 HOH A 70 470 370 HOH HOH . G 6 HOH A 71 471 371 HOH HOH . G 6 HOH A 72 472 372 HOH HOH . G 6 HOH A 73 473 373 HOH HOH . G 6 HOH A 74 474 374 HOH HOH . G 6 HOH A 75 475 375 HOH HOH . G 6 HOH A 76 476 376 HOH HOH . G 6 HOH A 77 477 377 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 3 0.279 15.046 -17.529 1 40.24 ? C ACT 303 A 1 HETATM 2 O O ACT . . . D 3 -0.859 15.519 -17.676 1 40 ? O ACT 303 A 1 HETATM 3 O OXT ACT . . . D 3 0.932 15.26 -16.5 1 47.12 ? OXT ACT 303 A 1 HETATM 4 C CH3 ACT . . . D 3 0.882 14.185 -18.595 1 47.53 ? CH3 ACT 303 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #