data_4O7R # _model_server_result.job_id 7eNRwFj15Ps9sr71uWvw1A _model_server_result.datetime_utc '2024-10-19 19:20:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o7r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4O7R # _exptl.entry_id 4O7R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O7R _cell.length_a 43.8 _cell.length_b 153.07 _cell.length_c 77.69 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O7R _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 43.8 0 38.845 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 266 n n P O2 PO4 sing 267 n n P O3 PO4 sing 268 n n P O4 PO4 sing 269 n n # _atom_sites.entry_id 4O7R _atom_sites.fract_transf_matrix[1][1] 0.022831 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U5P A 1 301 420 U5P U5P . C 3 UDP A 1 302 425 UDP UDP . D 4 PO4 A 1 303 501 PO4 PO4 . E 5 ACT A 1 304 502 ACT ACT . F 4 PO4 A 1 305 503 PO4 PO4 . G 6 HOH A 1 401 301 HOH HOH . G 6 HOH A 2 402 302 HOH HOH . G 6 HOH A 3 403 303 HOH HOH . G 6 HOH A 4 404 304 HOH HOH . G 6 HOH A 5 405 305 HOH HOH . G 6 HOH A 6 406 306 HOH HOH . G 6 HOH A 7 407 307 HOH HOH . G 6 HOH A 8 408 308 HOH HOH . G 6 HOH A 9 409 309 HOH HOH . G 6 HOH A 10 410 310 HOH HOH . G 6 HOH A 11 411 311 HOH HOH . G 6 HOH A 12 412 312 HOH HOH . G 6 HOH A 13 413 313 HOH HOH . G 6 HOH A 14 414 314 HOH HOH . G 6 HOH A 15 415 315 HOH HOH . G 6 HOH A 16 416 316 HOH HOH . G 6 HOH A 17 417 317 HOH HOH . G 6 HOH A 18 418 318 HOH HOH . G 6 HOH A 19 419 319 HOH HOH . G 6 HOH A 20 420 320 HOH HOH . G 6 HOH A 21 421 321 HOH HOH . G 6 HOH A 22 422 322 HOH HOH . G 6 HOH A 23 423 323 HOH HOH . G 6 HOH A 24 424 324 HOH HOH . G 6 HOH A 25 425 325 HOH HOH . G 6 HOH A 26 426 326 HOH HOH . G 6 HOH A 27 427 327 HOH HOH . G 6 HOH A 28 428 328 HOH HOH . G 6 HOH A 29 429 329 HOH HOH . G 6 HOH A 30 430 330 HOH HOH . G 6 HOH A 31 431 331 HOH HOH . G 6 HOH A 32 432 332 HOH HOH . G 6 HOH A 33 433 333 HOH HOH . G 6 HOH A 34 434 336 HOH HOH . G 6 HOH A 35 435 337 HOH HOH . G 6 HOH A 36 436 338 HOH HOH . G 6 HOH A 37 437 339 HOH HOH . G 6 HOH A 38 438 340 HOH HOH . G 6 HOH A 39 439 341 HOH HOH . G 6 HOH A 40 440 342 HOH HOH . G 6 HOH A 41 441 343 HOH HOH . G 6 HOH A 42 442 344 HOH HOH . G 6 HOH A 43 443 345 HOH HOH . G 6 HOH A 44 444 346 HOH HOH . G 6 HOH A 45 445 347 HOH HOH . G 6 HOH A 46 446 348 HOH HOH . G 6 HOH A 47 447 349 HOH HOH . G 6 HOH A 48 448 350 HOH HOH . G 6 HOH A 49 449 351 HOH HOH . G 6 HOH A 50 450 352 HOH HOH . G 6 HOH A 51 451 353 HOH HOH . G 6 HOH A 52 452 354 HOH HOH . G 6 HOH A 53 453 355 HOH HOH . G 6 HOH A 54 454 356 HOH HOH . G 6 HOH A 55 455 357 HOH HOH . G 6 HOH A 56 456 358 HOH HOH . G 6 HOH A 57 457 359 HOH HOH . G 6 HOH A 58 458 360 HOH HOH . G 6 HOH A 59 459 361 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 4 22.227 14.214 -2.669 1 63.21 ? P PO4 305 A 1 HETATM 2 O O1 PO4 . . . F 4 22.891 14.093 -4.022 1 64.19 ? O1 PO4 305 A 1 HETATM 3 O O2 PO4 . . . F 4 20.73 14.295 -2.86 1 64.85 ? O2 PO4 305 A 1 HETATM 4 O O3 PO4 . . . F 4 22.59 13.001 -1.828 1 66.45 ? O3 PO4 305 A 1 HETATM 5 O O4 PO4 . . . F 4 22.696 15.474 -1.987 1 64.41 ? O4 PO4 305 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #