data_4O7W # _model_server_result.job_id G20QcbywIXxqMQf2JOLFRw _model_server_result.datetime_utc '2025-07-30 15:17:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4O7W # _exptl.entry_id 4O7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O7W _cell.length_a 44.15 _cell.length_b 154.53 _cell.length_c 78.43 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_654 -x+1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 44.15 0 -39.215 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 315 n n P O2 PO4 sing 316 n n P O3 PO4 sing 317 n n P O4 PO4 sing 318 n n # _atom_sites.entry_id 4O7W _atom_sites.fract_transf_matrix[1][1] 0.02265 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006471 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TYD A 1 301 420 TYD TYD . C 3 ATP A 1 302 422 ATP ATP . D 4 PO4 A 1 303 501 PO4 PO4 . E 5 ACT A 1 304 502 ACT ACT . F 6 HOH A 1 401 295 HOH HOH . F 6 HOH A 2 402 296 HOH HOH . F 6 HOH A 3 403 297 HOH HOH . F 6 HOH A 4 404 298 HOH HOH . F 6 HOH A 5 405 299 HOH HOH . F 6 HOH A 6 406 300 HOH HOH . F 6 HOH A 7 407 301 HOH HOH . F 6 HOH A 8 408 302 HOH HOH . F 6 HOH A 9 409 303 HOH HOH . F 6 HOH A 10 410 304 HOH HOH . F 6 HOH A 11 411 305 HOH HOH . F 6 HOH A 12 412 306 HOH HOH . F 6 HOH A 13 413 307 HOH HOH . F 6 HOH A 14 414 308 HOH HOH . F 6 HOH A 15 415 309 HOH HOH . F 6 HOH A 16 416 310 HOH HOH . F 6 HOH A 17 417 311 HOH HOH . F 6 HOH A 18 418 312 HOH HOH . F 6 HOH A 19 419 313 HOH HOH . F 6 HOH A 20 420 314 HOH HOH . F 6 HOH A 21 421 315 HOH HOH . F 6 HOH A 22 422 316 HOH HOH . F 6 HOH A 23 423 317 HOH HOH . F 6 HOH A 24 424 318 HOH HOH . F 6 HOH A 25 425 319 HOH HOH . F 6 HOH A 26 426 320 HOH HOH . F 6 HOH A 27 427 321 HOH HOH . F 6 HOH A 28 428 322 HOH HOH . F 6 HOH A 29 429 323 HOH HOH . F 6 HOH A 30 430 324 HOH HOH . F 6 HOH A 31 431 325 HOH HOH . F 6 HOH A 32 432 326 HOH HOH . F 6 HOH A 33 433 327 HOH HOH . F 6 HOH A 34 434 328 HOH HOH . F 6 HOH A 35 435 329 HOH HOH . F 6 HOH A 36 436 330 HOH HOH . F 6 HOH A 37 437 331 HOH HOH . F 6 HOH A 38 438 332 HOH HOH . F 6 HOH A 39 439 333 HOH HOH . F 6 HOH A 40 440 334 HOH HOH . F 6 HOH A 41 441 335 HOH HOH . F 6 HOH A 42 442 336 HOH HOH . F 6 HOH A 43 443 337 HOH HOH . F 6 HOH A 44 444 338 HOH HOH . F 6 HOH A 45 445 339 HOH HOH . F 6 HOH A 46 446 340 HOH HOH . F 6 HOH A 47 447 341 HOH HOH . F 6 HOH A 48 448 342 HOH HOH . F 6 HOH A 49 449 343 HOH HOH . F 6 HOH A 50 450 344 HOH HOH . F 6 HOH A 51 451 345 HOH HOH . F 6 HOH A 52 452 346 HOH HOH . F 6 HOH A 53 453 347 HOH HOH . F 6 HOH A 54 454 348 HOH HOH . F 6 HOH A 55 455 349 HOH HOH . F 6 HOH A 56 456 350 HOH HOH . F 6 HOH A 57 457 351 HOH HOH . F 6 HOH A 58 458 352 HOH HOH . F 6 HOH A 59 459 353 HOH HOH . F 6 HOH A 60 460 354 HOH HOH . F 6 HOH A 61 461 355 HOH HOH . F 6 HOH A 62 462 356 HOH HOH . F 6 HOH A 63 463 357 HOH HOH . F 6 HOH A 64 464 358 HOH HOH . F 6 HOH A 65 465 359 HOH HOH . F 6 HOH A 66 466 360 HOH HOH . F 6 HOH A 67 467 361 HOH HOH . F 6 HOH A 68 468 362 HOH HOH . F 6 HOH A 69 469 363 HOH HOH . F 6 HOH A 70 470 364 HOH HOH . F 6 HOH A 71 471 365 HOH HOH . F 6 HOH A 72 472 366 HOH HOH . F 6 HOH A 73 473 367 HOH HOH . F 6 HOH A 74 474 368 HOH HOH . F 6 HOH A 75 475 369 HOH HOH . F 6 HOH A 76 476 370 HOH HOH . F 6 HOH A 77 477 371 HOH HOH . F 6 HOH A 78 478 372 HOH HOH . F 6 HOH A 79 479 373 HOH HOH . F 6 HOH A 80 480 374 HOH HOH . F 6 HOH A 81 481 375 HOH HOH . F 6 HOH A 82 482 376 HOH HOH . F 6 HOH A 83 483 377 HOH HOH . F 6 HOH A 84 484 378 HOH HOH . F 6 HOH A 85 485 379 HOH HOH . F 6 HOH A 86 486 380 HOH HOH . F 6 HOH A 87 487 381 HOH HOH . F 6 HOH A 88 488 382 HOH HOH . F 6 HOH A 89 489 383 HOH HOH . F 6 HOH A 90 490 384 HOH HOH . F 6 HOH A 91 491 385 HOH HOH . F 6 HOH A 92 492 386 HOH HOH . F 6 HOH A 93 493 387 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 4 16.511 -10.779 -5.608 1 68.72 ? P PO4 303 A 1 HETATM 2 O O1 PO4 . . . D 4 17.651 -10.572 -4.634 1 67.68 ? O1 PO4 303 A 1 HETATM 3 O O2 PO4 . . . D 4 16.489 -9.645 -6.615 1 65.76 ? O2 PO4 303 A 1 HETATM 4 O O3 PO4 . . . D 4 16.649 -12.117 -6.311 1 69.83 ? O3 PO4 303 A 1 HETATM 5 O O4 PO4 . . . D 4 15.224 -10.773 -4.824 1 68.94 ? O4 PO4 303 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #