data_4O7X # _model_server_result.job_id Ubx0imT-YSW_L8OOSeWjSw _model_server_result.datetime_utc '2025-07-12 11:08:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o7x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4O7X # _exptl.entry_id 4O7X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4O7X _cell.length_a 57.093 _cell.length_b 57.093 _cell.length_c 145.729 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O7X _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 168 A CYS 230 1_555 A SG CYS 205 A CYS 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc1 A NE2 HIS 142 A HIS 204 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc2 A OD1 ASP 144 A ASP 206 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc3 A NE2 HIS 204 A HIS 266 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc4 B MN MN . A MN 301 1_555 C O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc5 B MN MN . A MN 301 1_555 C O HOH . A HOH 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc6 B MN MN . A MN 301 1_555 C O HOH . A HOH 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4O7X _atom_sites.fract_transf_matrix[1][1] 0.017515 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017515 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006862 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 301 352 MN MN . C 3 HOH A 1 401 1 HOH HOH . C 3 HOH A 2 402 2 HOH HOH . C 3 HOH A 3 403 3 HOH HOH . C 3 HOH A 4 404 4 HOH HOH . C 3 HOH A 5 405 6 HOH HOH . C 3 HOH A 6 406 7 HOH HOH . C 3 HOH A 7 407 8 HOH HOH . C 3 HOH A 8 408 9 HOH HOH . C 3 HOH A 9 409 10 HOH HOH . C 3 HOH A 10 410 12 HOH HOH . C 3 HOH A 11 411 13 HOH HOH . C 3 HOH A 12 412 14 HOH HOH . C 3 HOH A 13 413 15 HOH HOH . C 3 HOH A 14 414 17 HOH HOH . C 3 HOH A 15 415 18 HOH HOH . C 3 HOH A 16 416 20 HOH HOH . C 3 HOH A 17 417 21 HOH HOH . C 3 HOH A 18 418 24 HOH HOH . C 3 HOH A 19 419 28 HOH HOH . C 3 HOH A 20 420 29 HOH HOH . C 3 HOH A 21 421 32 HOH HOH . C 3 HOH A 22 422 33 HOH HOH . C 3 HOH A 23 423 34 HOH HOH . C 3 HOH A 24 424 35 HOH HOH . C 3 HOH A 25 425 38 HOH HOH . C 3 HOH A 26 426 39 HOH HOH . C 3 HOH A 27 427 40 HOH HOH . C 3 HOH A 28 428 41 HOH HOH . C 3 HOH A 29 429 45 HOH HOH . C 3 HOH A 30 430 48 HOH HOH . C 3 HOH A 31 431 49 HOH HOH . C 3 HOH A 32 432 50 HOH HOH . C 3 HOH A 33 433 54 HOH HOH . C 3 HOH A 34 434 56 HOH HOH . C 3 HOH A 35 435 57 HOH HOH . C 3 HOH A 36 436 58 HOH HOH . C 3 HOH A 37 437 59 HOH HOH . C 3 HOH A 38 438 60 HOH HOH . C 3 HOH A 39 439 61 HOH HOH . C 3 HOH A 40 440 63 HOH HOH . C 3 HOH A 41 441 65 HOH HOH . C 3 HOH A 42 442 66 HOH HOH . C 3 HOH A 43 443 67 HOH HOH . C 3 HOH A 44 444 68 HOH HOH . C 3 HOH A 45 445 69 HOH HOH . C 3 HOH A 46 446 70 HOH HOH . C 3 HOH A 47 447 71 HOH HOH . C 3 HOH A 48 448 72 HOH HOH . C 3 HOH A 49 449 73 HOH HOH . C 3 HOH A 50 450 77 HOH HOH . C 3 HOH A 51 451 81 HOH HOH . C 3 HOH A 52 452 85 HOH HOH . C 3 HOH A 53 453 87 HOH HOH . C 3 HOH A 54 454 89 HOH HOH . C 3 HOH A 55 455 90 HOH HOH . C 3 HOH A 56 456 92 HOH HOH . C 3 HOH A 57 457 93 HOH HOH . C 3 HOH A 58 458 96 HOH HOH . C 3 HOH A 59 459 105 HOH HOH . C 3 HOH A 60 460 116 HOH HOH . C 3 HOH A 61 461 118 HOH HOH . C 3 HOH A 62 462 124 HOH HOH . C 3 HOH A 63 463 138 HOH HOH . C 3 HOH A 64 464 140 HOH HOH . C 3 HOH A 65 465 141 HOH HOH . C 3 HOH A 66 466 148 HOH HOH . C 3 HOH A 67 467 154 HOH HOH . C 3 HOH A 68 468 155 HOH HOH . C 3 HOH A 69 469 172 HOH HOH . C 3 HOH A 70 470 185 HOH HOH . C 3 HOH A 71 471 186 HOH HOH . C 3 HOH A 72 472 187 HOH HOH . C 3 HOH A 73 473 188 HOH HOH . C 3 HOH A 74 474 244 HOH HOH . C 3 HOH A 75 475 245 HOH HOH . C 3 HOH A 76 476 246 HOH HOH . C 3 HOH A 77 477 247 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.457 _atom_site.Cartn_y 7.792 _atom_site.Cartn_z 16.109 _atom_site.occupancy 0.7 _atom_site.B_iso_or_equiv 27.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #