data_4O98 # _model_server_result.job_id SXwknXE6GTKXhE0AvpNHUQ _model_server_result.datetime_utc '2024-11-07 07:39:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4o98 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4O98 # _exptl.entry_id 4O98 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4O98 _cell.length_a 116.742 _cell.length_b 116.742 _cell.length_c 83.395 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4O98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 146 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 146 B CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc1 A NE2 HIS 139 A HIS 139 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc2 A ND1 HIS 141 A HIS 141 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc3 A OD2 ASP 143 A ASP 143 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc4 A NE2 HIS 226 A HIS 226 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc5 A OD2 ASP 247 A ASP 247 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc6 A OD2 ASP 247 A ASP 247 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc7 A NE2 HIS 294 A HIS 294 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc8 C ZN ZN . A ZN 401 1_555 G O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc9 D ZN ZN . A ZN 402 1_555 G O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc10 B NE2 HIS 139 B HIS 139 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc11 B ND1 HIS 141 B HIS 141 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc12 B OD2 ASP 143 B ASP 143 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc13 B NE2 HIS 144 B HIS 144 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc14 B NE2 HIS 226 B HIS 226 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc15 B OD2 ASP 247 B ASP 247 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc16 B OD2 ASP 247 B ASP 247 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc17 B NE2 HIS 294 B HIS 294 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc18 E ZN ZN . B ZN 401 1_555 H O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc19 F ZN ZN . B ZN 402 1_555 H O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4O98 _atom_sites.fract_transf_matrix[1][1] 0.008566 _atom_sites.fract_transf_matrix[1][2] 0.004946 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009891 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 1 ZN ZN . D 2 ZN A 1 402 2 ZN ZN . E 2 ZN B 1 401 3 ZN ZN . F 2 ZN B 1 402 4 ZN ZN . G 3 HOH A 1 501 2 HOH HOH . G 3 HOH A 2 502 5 HOH HOH . G 3 HOH A 3 503 6 HOH HOH . G 3 HOH A 4 504 10 HOH HOH . G 3 HOH A 5 505 11 HOH HOH . G 3 HOH A 6 506 12 HOH HOH . G 3 HOH A 7 507 13 HOH HOH . G 3 HOH A 8 508 21 HOH HOH . G 3 HOH A 9 509 23 HOH HOH . G 3 HOH A 10 510 24 HOH HOH . G 3 HOH A 11 511 25 HOH HOH . G 3 HOH A 12 512 26 HOH HOH . G 3 HOH A 13 513 29 HOH HOH . G 3 HOH A 14 514 30 HOH HOH . G 3 HOH A 15 515 32 HOH HOH . G 3 HOH A 16 516 33 HOH HOH . G 3 HOH A 17 517 34 HOH HOH . G 3 HOH A 18 518 37 HOH HOH . G 3 HOH A 19 519 38 HOH HOH . G 3 HOH A 20 520 39 HOH HOH . G 3 HOH A 21 521 40 HOH HOH . G 3 HOH A 22 522 43 HOH HOH . G 3 HOH A 23 523 45 HOH HOH . G 3 HOH A 24 524 46 HOH HOH . G 3 HOH A 25 525 50 HOH HOH . G 3 HOH A 26 526 51 HOH HOH . G 3 HOH A 27 527 53 HOH HOH . G 3 HOH A 28 528 56 HOH HOH . G 3 HOH A 29 529 57 HOH HOH . G 3 HOH A 30 530 61 HOH HOH . G 3 HOH A 31 531 62 HOH HOH . G 3 HOH A 32 532 63 HOH HOH . G 3 HOH A 33 533 66 HOH HOH . G 3 HOH A 34 534 68 HOH HOH . G 3 HOH A 35 535 70 HOH HOH . G 3 HOH A 36 536 73 HOH HOH . G 3 HOH A 37 537 77 HOH HOH . G 3 HOH A 38 538 78 HOH HOH . G 3 HOH A 39 539 80 HOH HOH . G 3 HOH A 40 540 83 HOH HOH . G 3 HOH A 41 541 84 HOH HOH . G 3 HOH A 42 542 86 HOH HOH . G 3 HOH A 43 543 87 HOH HOH . G 3 HOH A 44 544 88 HOH HOH . G 3 HOH A 45 545 89 HOH HOH . G 3 HOH A 46 546 91 HOH HOH . G 3 HOH A 47 547 92 HOH HOH . G 3 HOH A 48 548 93 HOH HOH . G 3 HOH A 49 549 94 HOH HOH . G 3 HOH A 50 550 95 HOH HOH . G 3 HOH A 51 551 96 HOH HOH . G 3 HOH A 52 552 101 HOH HOH . G 3 HOH A 53 553 102 HOH HOH . G 3 HOH A 54 554 104 HOH HOH . G 3 HOH A 55 555 109 HOH HOH . G 3 HOH A 56 556 112 HOH HOH . G 3 HOH A 57 557 114 HOH HOH . G 3 HOH A 58 558 118 HOH HOH . G 3 HOH A 59 559 120 HOH HOH . G 3 HOH A 60 560 122 HOH HOH . G 3 HOH A 61 561 125 HOH HOH . G 3 HOH A 62 562 126 HOH HOH . G 3 HOH A 63 563 127 HOH HOH . G 3 HOH A 64 564 138 HOH HOH . G 3 HOH A 65 565 141 HOH HOH . G 3 HOH A 66 566 145 HOH HOH . G 3 HOH A 67 567 147 HOH HOH . G 3 HOH A 68 568 150 HOH HOH . G 3 HOH A 69 569 153 HOH HOH . G 3 HOH A 70 570 154 HOH HOH . G 3 HOH A 71 571 159 HOH HOH . G 3 HOH A 72 572 160 HOH HOH . G 3 HOH A 73 573 162 HOH HOH . G 3 HOH A 74 574 163 HOH HOH . G 3 HOH A 75 575 164 HOH HOH . G 3 HOH A 76 576 167 HOH HOH . G 3 HOH A 77 577 168 HOH HOH . G 3 HOH A 78 578 171 HOH HOH . G 3 HOH A 79 579 175 HOH HOH . G 3 HOH A 80 580 181 HOH HOH . G 3 HOH A 81 581 185 HOH HOH . G 3 HOH A 82 582 189 HOH HOH . G 3 HOH A 83 583 193 HOH HOH . G 3 HOH A 84 584 196 HOH HOH . G 3 HOH A 85 585 199 HOH HOH . G 3 HOH A 86 586 207 HOH HOH . G 3 HOH A 87 587 208 HOH HOH . G 3 HOH A 88 588 209 HOH HOH . G 3 HOH A 89 589 213 HOH HOH . G 3 HOH A 90 590 214 HOH HOH . G 3 HOH A 91 591 216 HOH HOH . G 3 HOH A 92 592 220 HOH HOH . G 3 HOH A 93 593 223 HOH HOH . G 3 HOH A 94 594 232 HOH HOH . G 3 HOH A 95 595 240 HOH HOH . G 3 HOH A 96 596 241 HOH HOH . G 3 HOH A 97 597 242 HOH HOH . G 3 HOH A 98 598 249 HOH HOH . G 3 HOH A 99 599 253 HOH HOH . G 3 HOH A 100 600 254 HOH HOH . G 3 HOH A 101 601 255 HOH HOH . G 3 HOH A 102 602 257 HOH HOH . G 3 HOH A 103 603 227 HOH HOH . H 3 HOH B 1 501 1 HOH HOH . H 3 HOH B 2 502 3 HOH HOH . H 3 HOH B 3 503 4 HOH HOH . H 3 HOH B 4 504 7 HOH HOH . H 3 HOH B 5 505 8 HOH HOH . H 3 HOH B 6 506 14 HOH HOH . H 3 HOH B 7 507 15 HOH HOH . H 3 HOH B 8 508 16 HOH HOH . H 3 HOH B 9 509 17 HOH HOH . H 3 HOH B 10 510 18 HOH HOH . H 3 HOH B 11 511 19 HOH HOH . H 3 HOH B 12 512 22 HOH HOH . H 3 HOH B 13 513 27 HOH HOH . H 3 HOH B 14 514 28 HOH HOH . H 3 HOH B 15 515 31 HOH HOH . H 3 HOH B 16 516 35 HOH HOH . H 3 HOH B 17 517 41 HOH HOH . H 3 HOH B 18 518 42 HOH HOH . H 3 HOH B 19 519 44 HOH HOH . H 3 HOH B 20 520 47 HOH HOH . H 3 HOH B 21 521 48 HOH HOH . H 3 HOH B 22 522 49 HOH HOH . H 3 HOH B 23 523 54 HOH HOH . H 3 HOH B 24 524 58 HOH HOH . H 3 HOH B 25 525 59 HOH HOH . H 3 HOH B 26 526 60 HOH HOH . H 3 HOH B 27 527 64 HOH HOH . H 3 HOH B 28 528 65 HOH HOH . H 3 HOH B 29 529 67 HOH HOH . H 3 HOH B 30 530 69 HOH HOH . H 3 HOH B 31 531 71 HOH HOH . H 3 HOH B 32 532 72 HOH HOH . H 3 HOH B 33 533 74 HOH HOH . H 3 HOH B 34 534 75 HOH HOH . H 3 HOH B 35 535 76 HOH HOH . H 3 HOH B 36 536 81 HOH HOH . H 3 HOH B 37 537 82 HOH HOH . H 3 HOH B 38 538 85 HOH HOH . H 3 HOH B 39 539 90 HOH HOH . H 3 HOH B 40 540 97 HOH HOH . H 3 HOH B 41 541 99 HOH HOH . H 3 HOH B 42 542 100 HOH HOH . H 3 HOH B 43 543 103 HOH HOH . H 3 HOH B 44 544 105 HOH HOH . H 3 HOH B 45 545 110 HOH HOH . H 3 HOH B 46 546 111 HOH HOH . H 3 HOH B 47 547 113 HOH HOH . H 3 HOH B 48 548 115 HOH HOH . H 3 HOH B 49 549 116 HOH HOH . H 3 HOH B 50 550 117 HOH HOH . H 3 HOH B 51 551 121 HOH HOH . H 3 HOH B 52 552 123 HOH HOH . H 3 HOH B 53 553 124 HOH HOH . H 3 HOH B 54 554 128 HOH HOH . H 3 HOH B 55 555 129 HOH HOH . H 3 HOH B 56 556 142 HOH HOH . H 3 HOH B 57 557 146 HOH HOH . H 3 HOH B 58 558 148 HOH HOH . H 3 HOH B 59 559 151 HOH HOH . H 3 HOH B 60 560 156 HOH HOH . H 3 HOH B 61 561 157 HOH HOH . H 3 HOH B 62 562 158 HOH HOH . H 3 HOH B 63 563 161 HOH HOH . H 3 HOH B 64 564 169 HOH HOH . H 3 HOH B 65 565 170 HOH HOH . H 3 HOH B 66 566 173 HOH HOH . H 3 HOH B 67 567 174 HOH HOH . H 3 HOH B 68 568 177 HOH HOH . H 3 HOH B 69 569 178 HOH HOH . H 3 HOH B 70 570 179 HOH HOH . H 3 HOH B 71 571 180 HOH HOH . H 3 HOH B 72 572 182 HOH HOH . H 3 HOH B 73 573 184 HOH HOH . H 3 HOH B 74 574 186 HOH HOH . H 3 HOH B 75 575 187 HOH HOH . H 3 HOH B 76 576 190 HOH HOH . H 3 HOH B 77 577 194 HOH HOH . H 3 HOH B 78 578 195 HOH HOH . H 3 HOH B 79 579 198 HOH HOH . H 3 HOH B 80 580 203 HOH HOH . H 3 HOH B 81 581 205 HOH HOH . H 3 HOH B 82 582 215 HOH HOH . H 3 HOH B 83 583 221 HOH HOH . H 3 HOH B 84 584 222 HOH HOH . H 3 HOH B 85 585 224 HOH HOH . H 3 HOH B 86 586 230 HOH HOH . H 3 HOH B 87 587 231 HOH HOH . H 3 HOH B 88 588 235 HOH HOH . H 3 HOH B 89 589 237 HOH HOH . H 3 HOH B 90 590 238 HOH HOH . H 3 HOH B 91 591 239 HOH HOH . H 3 HOH B 92 592 243 HOH HOH . H 3 HOH B 93 593 244 HOH HOH . H 3 HOH B 94 594 245 HOH HOH . H 3 HOH B 95 595 246 HOH HOH . H 3 HOH B 96 596 247 HOH HOH . H 3 HOH B 97 597 248 HOH HOH . H 3 HOH B 98 598 250 HOH HOH . H 3 HOH B 99 599 251 HOH HOH . H 3 HOH B 100 600 252 HOH HOH . H 3 HOH B 101 601 256 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.541 _atom_site.Cartn_y -35.786 _atom_site.Cartn_z 1.037 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #