data_4O9U
#
_model_server_result.job_id            gFg0_MgRx2r2K965eRR7kw 
_model_server_result.datetime_utc      '2024-11-04 22:32:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4o9u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":500}' 
#
_entry.id    4O9U 
#
_exptl.entry_id    4O9U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     1.6.1.2 
#
_cell.angle_alpha         90 
_cell.angle_beta          128.36 
_cell.angle_gamma         90 
_cell.entry_id            4O9U 
_cell.length_a            175.331 
_cell.length_b            160.59 
_cell.length_c            139.624 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4O9U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 310 n n 
PA O2A NAP sing 311 n n 
PA O5B NAP sing 312 n n 
PA O3 NAP sing 313 n n 
O2A HOA2 NAP sing 314 n n 
O5B C5B NAP sing 315 n n 
C5B C4B NAP sing 316 n n 
C5B H51A NAP sing 317 n n 
C5B H52A NAP sing 318 n n 
C4B O4B NAP sing 319 n n 
C4B C3B NAP sing 320 n n 
C4B H4B NAP sing 321 n n 
O4B C1B NAP sing 322 n n 
C3B O3B NAP sing 323 n n 
C3B C2B NAP sing 324 n n 
C3B H3B NAP sing 325 n n 
O3B HO3A NAP sing 326 n n 
C2B O2B NAP sing 327 n n 
C2B C1B NAP sing 328 n n 
C2B H2B NAP sing 329 n n 
O2B P2B NAP sing 330 n n 
C1B N9A NAP sing 331 n n 
C1B H1B NAP sing 332 n n 
N9A C8A NAP sing 333 n y 
N9A C4A NAP sing 334 n y 
C8A N7A NAP doub 335 n y 
C8A H8A NAP sing 336 n n 
N7A C5A NAP sing 337 n y 
C5A C6A NAP sing 338 n y 
C5A C4A NAP doub 339 n y 
C6A N6A NAP sing 340 n n 
C6A N1A NAP doub 341 n y 
N6A H61A NAP sing 342 n n 
N6A H62A NAP sing 343 n n 
N1A C2A NAP sing 344 n y 
C2A N3A NAP doub 345 n y 
C2A H2A NAP sing 346 n n 
N3A C4A NAP sing 347 n y 
O3 PN NAP sing 348 n n 
PN O1N NAP doub 349 n n 
PN O2N NAP sing 350 n n 
PN O5D NAP sing 351 n n 
O5D C5D NAP sing 352 n n 
C5D C4D NAP sing 353 n n 
C5D H51N NAP sing 354 n n 
C5D H52N NAP sing 355 n n 
C4D O4D NAP sing 356 n n 
C4D C3D NAP sing 357 n n 
C4D H4D NAP sing 358 n n 
O4D C1D NAP sing 359 n n 
C3D O3D NAP sing 360 n n 
C3D C2D NAP sing 361 n n 
C3D H3D NAP sing 362 n n 
O3D HO3N NAP sing 363 n n 
C2D O2D NAP sing 364 n n 
C2D C1D NAP sing 365 n n 
C2D H2D NAP sing 366 n n 
O2D HO2N NAP sing 367 n n 
C1D N1N NAP sing 368 n n 
C1D H1D NAP sing 369 n n 
N1N C2N NAP sing 370 n y 
N1N C6N NAP doub 371 n y 
C2N C3N NAP doub 372 n y 
C2N H2N NAP sing 373 n n 
C3N C7N NAP sing 374 n n 
C3N C4N NAP sing 375 n y 
C7N O7N NAP doub 376 n n 
C7N N7N NAP sing 377 n n 
N7N H71N NAP sing 378 n n 
N7N H72N NAP sing 379 n n 
C4N C5N NAP doub 380 n y 
C4N H4N NAP sing 381 n n 
C5N C6N NAP sing 382 n y 
C5N H5N NAP sing 383 n n 
C6N H6N NAP sing 384 n n 
P2B O1X NAP doub 385 n n 
P2B O2X NAP sing 386 n n 
P2B O3X NAP sing 387 n n 
O2X HOP2 NAP sing 388 n n 
O3X HOP3 NAP sing 389 n n 
#
_atom_sites.entry_id                     4O9U 
_atom_sites.fract_transf_matrix[1][1]    0.005703 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004514 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006227 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009134 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 NAP B 1 500 500 NAP NAP . 
H 4 NAP D 1 500 500 NAP NAP . 
I 5 NAD E 1 500 500 NAD NAD . 
J 5 NAD F 1 500 500 NAD NAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . G 4 213.737 -49.343 44.073 1 96.11 ? PA NAP 500 B 1 
HETATM 2 O O1A NAP . . . G 4 214.81 -48.437 44.619 1 96.1 ? O1A NAP 500 B 1 
HETATM 3 O O2A NAP . . . G 4 213.622 -50.74 44.62 1 94.47 ? O2A NAP 500 B 1 
HETATM 4 O O5B NAP . . . G 4 212.313 -48.611 44.265 1 95.36 ? O5B NAP 500 B 1 
HETATM 5 C C5B NAP . . . G 4 211.078 -49.255 43.944 1 93.67 ? C5B NAP 500 B 1 
HETATM 6 C C4B NAP . . . G 4 209.925 -48.353 44.37 1 92.67 ? C4B NAP 500 B 1 
HETATM 7 O O4B NAP . . . G 4 208.806 -48.463 43.484 1 91.48 ? O4B NAP 500 B 1 
HETATM 8 C C3B NAP . . . G 4 209.411 -48.711 45.755 1 93.11 ? C3B NAP 500 B 1 
HETATM 9 O O3B NAP . . . G 4 209.938 -47.798 46.719 1 93.64 ? O3B NAP 500 B 1 
HETATM 10 C C2B NAP . . . G 4 207.894 -48.627 45.656 1 93.63 ? C2B NAP 500 B 1 
HETATM 11 O O2B NAP . . . G 4 207.313 -47.691 46.568 1 97.19 ? O2B NAP 500 B 1 
HETATM 12 C C1B NAP . . . G 4 207.609 -48.205 44.222 1 91.81 ? C1B NAP 500 B 1 
HETATM 13 N N9A NAP . . . G 4 206.434 -48.963 43.716 1 90.67 ? N9A NAP 500 B 1 
HETATM 14 C C8A NAP . . . G 4 206.265 -50.3 43.775 1 90.35 ? C8A NAP 500 B 1 
HETATM 15 N N7A NAP . . . G 4 205.077 -50.673 43.235 1 90.31 ? N7A NAP 500 B 1 
HETATM 16 C C5A NAP . . . G 4 204.455 -49.556 42.818 1 90.33 ? C5A NAP 500 B 1 
HETATM 17 C C6A NAP . . . G 4 203.164 -49.232 42.157 1 90.24 ? C6A NAP 500 B 1 
HETATM 18 N N6A NAP . . . G 4 202.283 -50.205 41.829 1 90.6 ? N6A NAP 500 B 1 
HETATM 19 N N1A NAP . . . G 4 202.893 -47.932 41.894 1 89.93 ? N1A NAP 500 B 1 
HETATM 20 C C2A NAP . . . G 4 203.761 -46.953 42.215 1 90.26 ? C2A NAP 500 B 1 
HETATM 21 N N3A NAP . . . G 4 204.949 -47.175 42.816 1 90.4 ? N3A NAP 500 B 1 
HETATM 22 C C4A NAP . . . G 4 205.35 -48.431 43.14 1 90.44 ? C4A NAP 500 B 1 
HETATM 23 O O3 NAP . . . G 4 213.899 -49.425 42.472 1 98.22 ? O3 NAP 500 B 1 
HETATM 24 P PN NAP . . . G 4 215.156 -48.751 41.721 1 99.94 ? PN NAP 500 B 1 
HETATM 25 O O1N NAP . . . G 4 215.259 -47.309 42.152 1 99.75 ? O1N NAP 500 B 1 
HETATM 26 O O2N NAP . . . G 4 215.062 -49.078 40.249 1 100.93 ? O2N NAP 500 B 1 
HETATM 27 O O5D NAP . . . G 4 216.406 -49.547 42.347 1 99.43 ? O5D NAP 500 B 1 
HETATM 28 C C5D NAP . . . G 4 216.821 -50.805 41.814 1 100.23 ? C5D NAP 500 B 1 
HETATM 29 C C4D NAP . . . G 4 217.389 -51.666 42.932 1 101.54 ? C4D NAP 500 B 1 
HETATM 30 O O4D NAP . . . G 4 217.634 -53.014 42.502 1 101.41 ? O4D NAP 500 B 1 
HETATM 31 C C3D NAP . . . G 4 218.716 -51.107 43.415 1 103.24 ? C3D NAP 500 B 1 
HETATM 32 O O3D NAP . . . G 4 218.551 -50.576 44.732 1 103.8 ? O3D NAP 500 B 1 
HETATM 33 C C2D NAP . . . G 4 219.674 -52.286 43.401 1 104.03 ? C2D NAP 500 B 1 
HETATM 34 O O2D NAP . . . G 4 220.386 -52.411 44.635 1 107.78 ? O2D NAP 500 B 1 
HETATM 35 C C1D NAP . . . G 4 218.804 -53.515 43.17 1 101.68 ? C1D NAP 500 B 1 
HETATM 36 N N1N NAP . . . G 4 219.543 -54.552 42.421 1 98.16 ? N1N NAP 500 B 1 
HETATM 37 C C2N NAP . . . G 4 219.329 -54.704 41.106 1 95.52 ? C2N NAP 500 B 1 
HETATM 38 C C3N NAP . . . G 4 220.015 -55.674 40.38 1 93.18 ? C3N NAP 500 B 1 
HETATM 39 C C7N NAP . . . G 4 219.746 -55.806 38.912 1 92.34 ? C7N NAP 500 B 1 
HETATM 40 O O7N NAP . . . G 4 220.341 -56.659 38.278 1 91.94 ? O7N NAP 500 B 1 
HETATM 41 N N7N NAP . . . G 4 218.865 -54.984 38.339 1 91.72 ? N7N NAP 500 B 1 
HETATM 42 C C4N NAP . . . G 4 220.938 -56.503 41.021 1 92.63 ? C4N NAP 500 B 1 
HETATM 43 C C5N NAP . . . G 4 221.151 -56.336 42.386 1 93.19 ? C5N NAP 500 B 1 
HETATM 44 C C6N NAP . . . G 4 220.43 -55.349 43.06 1 96 ? C6N NAP 500 B 1 
HETATM 45 P P2B NAP . . . G 4 205.853 -47.921 47.229 1 99.97 ? P2B NAP 500 B 1 
HETATM 46 O O1X NAP . . . G 4 205.95 -49.266 47.909 1 100.7 ? O1X NAP 500 B 1 
HETATM 47 O O2X NAP . . . G 4 205.694 -46.763 48.184 1 100.52 ? O2X NAP 500 B 1 
HETATM 48 O O3X NAP . . . G 4 204.874 -47.879 46.081 1 100.15 ? O3X NAP 500 B 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           48 
#