data_4OAR # _model_server_result.job_id 6BYWBasj4ZaOqz_NocItJQ _model_server_result.datetime_utc '2025-02-05 16:02:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oar # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 4OAR # _exptl.entry_id 4OAR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 475.619 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(8S,11R,13S,14S,17R)-17-acetyl-11-[4-(dimethylamino)phenyl]-13-methyl-3-oxo-1,2,6,7,8,11,12,14,15,16-decahydrocyclopen ta[a]phenanthren-17-yl] acetate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4OAR _cell.length_a 87.18 _cell.length_b 87.18 _cell.length_c 90.91 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OAR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H37 N O4' _chem_comp.formula_weight 475.619 _chem_comp.id 2S0 _chem_comp.mon_nstd_flag . _chem_comp.name '[(8S,11R,13S,14S,17R)-17-acetyl-11-[4-(dimethylamino)phenyl]-13-methyl-3-oxo-1,2,6,7,8,11,12,14,15,16-decahydrocyclopen ta[a]phenanthren-17-yl] acetate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ulipristal acetate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C15 2S0 sing 1 n n C16 C17 2S0 sing 2 n n O30 C30 2S0 doub 3 n n C15 C14 2S0 sing 4 n n O20 C20 2S0 doub 5 n n C30 C31 2S0 sing 6 n n C30 O17 2S0 sing 7 n n C17 O17 2S0 sing 8 n n C17 C20 2S0 sing 9 n n C17 C13 2S0 sing 10 n n C20 C21 2S0 sing 11 n n C14 C13 2S0 sing 12 n n C14 C8 2S0 sing 13 n n C7 C8 2S0 sing 14 n n C7 C6 2S0 sing 15 n n C13 C18 2S0 sing 16 n n C13 C12 2S0 sing 17 n n C8 C9 2S0 sing 18 n n C6 C5 2S0 sing 19 n n C12 C11 2S0 sing 20 n n C5 C4 2S0 doub 21 n n C5 C10 2S0 sing 22 n n C9 C10 2S0 doub 23 n n C9 C11 2S0 sing 24 n n C4 C3 2S0 sing 25 n n C10 C1 2S0 sing 26 n n C11 C32 2S0 sing 27 n n C33 C32 2S0 doub 28 n y C33 C34 2S0 sing 29 n y C32 C37 2S0 sing 30 n y C3 O3 2S0 doub 31 n n C3 C2 2S0 sing 32 n n C34 C35 2S0 doub 33 n y C1 C2 2S0 sing 34 n n C37 C36 2S0 doub 35 n y C35 C36 2S0 sing 36 n y C35 N38 2S0 sing 37 n n C39 N38 2S0 sing 38 n n N38 C40 2S0 sing 39 n n C1 H1 2S0 sing 40 n n C2 H2 2S0 sing 41 n n C4 H3 2S0 sing 42 n n C6 H4 2S0 sing 43 n n C6 H5 2S0 sing 44 n n C7 H6 2S0 sing 45 n n C7 H7 2S0 sing 46 n n C8 H8 2S0 sing 47 n n C11 H10 2S0 sing 48 n n C12 H11 2S0 sing 49 n n C12 H12 2S0 sing 50 n n C14 H13 2S0 sing 51 n n C15 H14 2S0 sing 52 n n C15 H15 2S0 sing 53 n n C16 H16 2S0 sing 54 n n C16 H17 2S0 sing 55 n n C18 H18 2S0 sing 56 n n C18 H19 2S0 sing 57 n n C18 H20 2S0 sing 58 n n C21 H21 2S0 sing 59 n n C21 H22 2S0 sing 60 n n C21 H23 2S0 sing 61 n n C33 H25 2S0 sing 62 n n C34 H26 2S0 sing 63 n n C36 H27 2S0 sing 64 n n C37 H28 2S0 sing 65 n n C39 H29 2S0 sing 66 n n C39 H30 2S0 sing 67 n n C39 H31 2S0 sing 68 n n C40 H32 2S0 sing 69 n n C40 H33 2S0 sing 70 n n C40 H34 2S0 sing 71 n n C31 H35 2S0 sing 72 n n C31 H36 2S0 sing 73 n n C31 H37 2S0 sing 74 n n C1 H38 2S0 sing 75 n n C2 H39 2S0 sing 76 n n # _atom_sites.entry_id 4OAR _atom_sites.fract_transf_matrix[1][1] 0.011471 _atom_sites.fract_transf_matrix[1][2] 0.006623 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013245 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 2S0 A 1 1001 1 2S0 UPA . D 4 HOH A 1 1101 1 HOH HOH . D 4 HOH A 2 1102 1102 HOH HOH . D 4 HOH A 3 1103 3 HOH HOH . D 4 HOH A 4 1104 4 HOH HOH . D 4 HOH A 5 1105 5 HOH HOH . D 4 HOH A 6 1106 6 HOH HOH . D 4 HOH A 7 1107 7 HOH HOH . D 4 HOH A 8 1108 8 HOH HOH . D 4 HOH A 9 1109 9 HOH HOH . D 4 HOH A 10 1110 10 HOH HOH . D 4 HOH A 11 1111 11 HOH HOH . D 4 HOH A 12 1112 12 HOH HOH . D 4 HOH A 13 1113 13 HOH HOH . D 4 HOH A 14 1114 14 HOH HOH . D 4 HOH A 15 1115 15 HOH HOH . D 4 HOH A 16 1116 16 HOH HOH . D 4 HOH A 17 1117 17 HOH HOH . D 4 HOH A 18 1118 18 HOH HOH . D 4 HOH A 19 1119 19 HOH HOH . D 4 HOH A 20 1120 20 HOH HOH . D 4 HOH A 21 1121 21 HOH HOH . D 4 HOH A 22 1122 22 HOH HOH . D 4 HOH A 23 1123 23 HOH HOH . D 4 HOH A 24 1124 24 HOH HOH . D 4 HOH A 25 1125 25 HOH HOH . D 4 HOH A 26 1126 26 HOH HOH . D 4 HOH A 27 1127 27 HOH HOH . D 4 HOH A 28 1128 28 HOH HOH . D 4 HOH A 29 1129 29 HOH HOH . D 4 HOH A 30 1130 30 HOH HOH . D 4 HOH A 31 1131 31 HOH HOH . D 4 HOH A 32 1132 32 HOH HOH . D 4 HOH A 33 1133 33 HOH HOH . D 4 HOH A 34 1134 34 HOH HOH . D 4 HOH A 35 1135 35 HOH HOH . D 4 HOH A 36 1136 36 HOH HOH . D 4 HOH A 37 1137 37 HOH HOH . D 4 HOH A 38 1138 38 HOH HOH . D 4 HOH A 39 1139 39 HOH HOH . D 4 HOH A 40 1140 40 HOH HOH . D 4 HOH A 41 1141 41 HOH HOH . D 4 HOH A 42 1142 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 2S0 . . . C 3 14.612 26.442 16.763 1 28.92 ? C1 2S0 1001 A 1 HETATM 2 C C2 2S0 . . . C 3 14.822 27.818 17.348 1 29.45 ? C2 2S0 1001 A 1 HETATM 3 C C3 2S0 . . . C 3 14.444 29.067 16.402 1 29.16 ? C3 2S0 1001 A 1 HETATM 4 C C4 2S0 . . . C 3 14.001 28.807 15.12 1 27.89 ? C4 2S0 1001 A 1 HETATM 5 C C5 2S0 . . . C 3 13.905 27.512 14.577 1 29.12 ? C5 2S0 1001 A 1 HETATM 6 C C6 2S0 . . . C 3 13.395 27.443 13.136 1 29.69 ? C6 2S0 1001 A 1 HETATM 7 C C7 2S0 . . . C 3 14.067 26.336 12.325 1 30.6 ? C7 2S0 1001 A 1 HETATM 8 C C8 2S0 . . . C 3 14.23 25.009 13.045 1 30.63 ? C8 2S0 1001 A 1 HETATM 9 C C9 2S0 . . . C 3 14.527 25.045 14.59 1 30.59 ? C9 2S0 1001 A 1 HETATM 10 C C10 2S0 . . . C 3 14.352 26.323 15.3 1 29.06 ? C10 2S0 1001 A 1 HETATM 11 C C11 2S0 . . . C 3 14.982 23.701 15.311 1 31.2 ? C11 2S0 1001 A 1 HETATM 12 C C12 2S0 . . . C 3 15.427 22.652 14.433 1 32.11 ? C12 2S0 1001 A 1 HETATM 13 C C13 2S0 . . . C 3 14.864 22.476 13.003 1 33.58 ? C13 2S0 1001 A 1 HETATM 14 C C14 2S0 . . . C 3 14.858 23.801 12.301 1 32.44 ? C14 2S0 1001 A 1 HETATM 15 C C15 2S0 . . . C 3 14.64 23.492 10.822 1 32.5 ? C15 2S0 1001 A 1 HETATM 16 C C16 2S0 . . . C 3 15.26 22.088 10.672 1 34.09 ? C16 2S0 1001 A 1 HETATM 17 C C17 2S0 . . . C 3 15.736 21.648 12.084 1 35.7 ? C17 2S0 1001 A 1 HETATM 18 C C18 2S0 . . . C 3 13.477 21.828 13.125 1 32.19 ? C18 2S0 1001 A 1 HETATM 19 C C20 2S0 . . . C 3 15.943 20.123 12.282 1 35.82 ? C20 2S0 1001 A 1 HETATM 20 C C21 2S0 . . . C 3 16.692 19.526 13.465 1 36 ? C21 2S0 1001 A 1 HETATM 21 O O3 2S0 . . . C 3 14.515 30.249 16.89 1 29.49 ? O3 2S0 1001 A 1 HETATM 22 O O20 2S0 . . . C 3 15.518 19.312 11.497 1 36.88 ? O20 2S0 1001 A 1 HETATM 23 C C32 2S0 . . . C 3 13.748 23.095 16.133 1 31.91 ? C32 2S0 1001 A 1 HETATM 24 C C33 2S0 . . . C 3 12.478 23.653 16.027 1 31.88 ? C33 2S0 1001 A 1 HETATM 25 C C34 2S0 . . . C 3 11.391 23.08 16.673 1 32.46 ? C34 2S0 1001 A 1 HETATM 26 C C35 2S0 . . . C 3 11.566 21.933 17.441 1 33.04 ? C35 2S0 1001 A 1 HETATM 27 C C36 2S0 . . . C 3 12.823 21.36 17.556 1 32.27 ? C36 2S0 1001 A 1 HETATM 28 C C37 2S0 . . . C 3 13.906 21.943 16.903 1 31.43 ? C37 2S0 1001 A 1 HETATM 29 N N38 2S0 . . . C 3 10.495 21.388 18.114 1 34.64 ? N38 2S0 1001 A 1 HETATM 30 C C39 2S0 . . . C 3 9.21 21.813 17.931 1 34.11 ? C39 2S0 1001 A 1 HETATM 31 C C40 2S0 . . . C 3 10.643 20.385 19.022 1 33.41 ? C40 2S0 1001 A 1 HETATM 32 C C31 2S0 . . . C 3 19.815 22.043 11.614 1 42.25 ? C31 2S0 1001 A 1 HETATM 33 C C30 2S0 . . . C 3 18.443 21.406 11.511 1 41.26 ? C30 2S0 1001 A 1 HETATM 34 O O30 2S0 . . . C 3 18.327 20.397 10.791 1 43.59 ? O30 2S0 1001 A 1 HETATM 35 O O17 2S0 . . . C 3 17.255 21.966 12.174 1 39.23 ? O17 2S0 1001 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #