data_4OBD
#
_model_server_result.job_id            jiu4icWddRZT6e37oLbVDA 
_model_server_result.datetime_utc      '2024-11-27 22:42:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4obd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":101}' 
#
_entry.id    4OBD 
#
_exptl.entry_id    4OBD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.6 
_cell.angle_gamma         90 
_cell.entry_id            4OBD 
_cell.length_a            51.474 
_cell.length_b            59.545 
_cell.length_c            59.362 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4OBD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,H,J,K,L,O 1 1 
C,D,F,I,M,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 I N N 
? 4 J N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     4OBD 
_atom_sites.fract_transf_matrix[1][1]    0.019427 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002938 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016794 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017037 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 GOL B 1 101 1 GOL GOL . 
H 4 EDO B 1 102 1 EDO EDO . 
I 4 EDO C 1 101 1 EDO EDO . 
J 4 EDO E 1 101 1 EDO EDO . 
K 5 HOH A 1 101 1 HOH HOH . 
K 5 HOH A 2 102 41 HOH HOH . 
K 5 HOH A 3 103 55 HOH HOH . 
K 5 HOH A 4 104 70 HOH HOH . 
K 5 HOH A 5 105 73 HOH HOH . 
K 5 HOH A 6 106 78 HOH HOH . 
K 5 HOH A 7 107 83 HOH HOH . 
K 5 HOH A 8 108 92 HOH HOH . 
K 5 HOH A 9 109 97 HOH HOH . 
K 5 HOH A 10 110 104 HOH HOH . 
K 5 HOH A 11 111 106 HOH HOH . 
K 5 HOH A 12 112 115 HOH HOH . 
K 5 HOH A 13 113 118 HOH HOH . 
K 5 HOH A 14 114 120 HOH HOH . 
K 5 HOH A 15 115 121 HOH HOH . 
K 5 HOH A 16 116 122 HOH HOH . 
K 5 HOH A 17 117 128 HOH HOH . 
K 5 HOH A 18 118 132 HOH HOH . 
K 5 HOH A 19 119 151 HOH HOH . 
K 5 HOH A 20 120 155 HOH HOH . 
K 5 HOH A 21 121 158 HOH HOH . 
K 5 HOH A 22 122 157 HOH HOH . 
L 5 HOH B 1 201 4 HOH HOH . 
L 5 HOH B 2 202 5 HOH HOH . 
L 5 HOH B 3 203 15 HOH HOH . 
L 5 HOH B 4 204 16 HOH HOH . 
L 5 HOH B 5 205 20 HOH HOH . 
L 5 HOH B 6 206 22 HOH HOH . 
L 5 HOH B 7 207 27 HOH HOH . 
L 5 HOH B 8 208 37 HOH HOH . 
L 5 HOH B 9 209 40 HOH HOH . 
L 5 HOH B 10 210 42 HOH HOH . 
L 5 HOH B 11 211 43 HOH HOH . 
L 5 HOH B 12 212 44 HOH HOH . 
L 5 HOH B 13 213 46 HOH HOH . 
L 5 HOH B 14 214 51 HOH HOH . 
L 5 HOH B 15 215 54 HOH HOH . 
L 5 HOH B 16 216 58 HOH HOH . 
L 5 HOH B 17 217 60 HOH HOH . 
L 5 HOH B 18 218 69 HOH HOH . 
L 5 HOH B 19 219 79 HOH HOH . 
L 5 HOH B 20 220 80 HOH HOH . 
L 5 HOH B 21 221 82 HOH HOH . 
L 5 HOH B 22 222 89 HOH HOH . 
L 5 HOH B 23 223 98 HOH HOH . 
L 5 HOH B 24 224 101 HOH HOH . 
L 5 HOH B 25 225 108 HOH HOH . 
L 5 HOH B 26 226 111 HOH HOH . 
L 5 HOH B 27 227 114 HOH HOH . 
L 5 HOH B 28 228 116 HOH HOH . 
L 5 HOH B 29 229 126 HOH HOH . 
L 5 HOH B 30 230 136 HOH HOH . 
L 5 HOH B 31 231 150 HOH HOH . 
L 5 HOH B 32 232 159 HOH HOH . 
M 5 HOH C 1 201 19 HOH HOH . 
M 5 HOH C 2 202 36 HOH HOH . 
M 5 HOH C 3 203 45 HOH HOH . 
M 5 HOH C 4 204 61 HOH HOH . 
M 5 HOH C 5 205 72 HOH HOH . 
M 5 HOH C 6 206 109 HOH HOH . 
M 5 HOH C 7 207 135 HOH HOH . 
M 5 HOH C 8 208 146 HOH HOH . 
M 5 HOH C 9 209 160 HOH HOH . 
M 5 HOH C 10 210 161 HOH HOH . 
N 5 HOH D 1 101 14 HOH HOH . 
N 5 HOH D 2 102 39 HOH HOH . 
N 5 HOH D 3 103 48 HOH HOH . 
N 5 HOH D 4 104 52 HOH HOH . 
N 5 HOH D 5 105 53 HOH HOH . 
N 5 HOH D 6 106 74 HOH HOH . 
N 5 HOH D 7 107 75 HOH HOH . 
N 5 HOH D 8 108 84 HOH HOH . 
N 5 HOH D 9 109 100 HOH HOH . 
N 5 HOH D 10 110 107 HOH HOH . 
N 5 HOH D 11 111 123 HOH HOH . 
N 5 HOH D 12 112 125 HOH HOH . 
N 5 HOH D 13 113 152 HOH HOH . 
N 5 HOH D 14 114 162 HOH HOH . 
N 5 HOH D 15 115 163 HOH HOH . 
O 5 HOH E 1 201 12 HOH HOH . 
O 5 HOH E 2 202 18 HOH HOH . 
P 5 HOH F 1 101 23 HOH HOH . 
P 5 HOH F 2 102 164 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 4 -5.464 7.741 4.589 1 25.61 ? C1 EDO 101 E 1 
HETATM 2 O O1 EDO . . . J 4 -6.65 8 5.33 1 37.88 ? O1 EDO 101 E 1 
HETATM 3 C C2 EDO . . . J 4 -4.187 7.86 5.376 1 29.9 ? C2 EDO 101 E 1 
HETATM 4 O O2 EDO . . . J 4 -3.172 7.2 4.604 1 39 ? O2 EDO 101 E 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#