data_4OBH
#
_model_server_result.job_id            3QsgwUrtInc2f6yjqEkAIg 
_model_server_result.datetime_utc      '2024-10-09 23:29:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4obh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":102}' 
#
_entry.id    4OBH 
#
_exptl.entry_id    4OBH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.03 
_cell.angle_gamma         90 
_cell.entry_id            4OBH 
_cell.length_a            51.144 
_cell.length_b            62.787 
_cell.length_c            58.537 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4OBH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,H,I,J,K,L,M,N,O,AA,BA,CA,FA 1 1 
C,D,F,P,Q,R,S,T,U,V,W,X,Y,Z,DA,EA,GA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 J N N 
? 3 T N N 
? 3 U N N 
? 3 AA N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 144 n n 
C1 C2 GOL sing 145 n n 
C1 H11 GOL sing 146 n n 
C1 H12 GOL sing 147 n n 
O1 HO1 GOL sing 148 n n 
C2 O2 GOL sing 149 n n 
C2 C3 GOL sing 150 n n 
C2 H2 GOL sing 151 n n 
O2 HO2 GOL sing 152 n n 
C3 O3 GOL sing 153 n n 
C3 H31 GOL sing 154 n n 
C3 H32 GOL sing 155 n n 
O3 HO3 GOL sing 156 n n 
#
_atom_sites.entry_id                     4OBH 
_atom_sites.fract_transf_matrix[1][1]    0.019553 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002758 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015927 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017252 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 GOL A 1 101 1 GOL GOL . 
H 3 GOL A 1 102 1 GOL GOL . 
I 4 EDO A 1 103 1 EDO EDO . 
J 3 GOL A 1 104 1 GOL GOL . 
K 4 EDO A 1 105 1 EDO EDO . 
L 4 EDO A 1 106 1 EDO EDO . 
M 4 EDO A 1 107 1 EDO EDO . 
N 4 EDO B 1 101 1 EDO EDO . 
O 4 EDO B 1 102 1 EDO EDO . 
P 5 ACT C 1 101 1 ACT ACT . 
Q 4 EDO C 1 102 1 EDO EDO . 
R 4 EDO C 1 103 1 EDO EDO . 
S 4 EDO C 1 104 1 EDO EDO . 
T 3 GOL D 1 101 1 GOL GOL . 
U 3 GOL D 1 102 1 GOL GOL . 
V 4 EDO D 1 103 1 EDO EDO . 
W 4 EDO D 1 104 1 EDO EDO . 
X 4 EDO D 1 105 1 EDO EDO . 
Y 4 EDO D 1 106 1 EDO EDO . 
Z 6 PO4 D 1 107 1 PO4 PO4 . 
AA 3 GOL E 1 101 1 GOL GOL . 
BA 7 HOH A 1 201 10 HOH HOH . 
BA 7 HOH A 2 202 16 HOH HOH . 
BA 7 HOH A 3 203 18 HOH HOH . 
BA 7 HOH A 4 204 26 HOH HOH . 
BA 7 HOH A 5 205 38 HOH HOH . 
BA 7 HOH A 6 206 43 HOH HOH . 
BA 7 HOH A 7 207 47 HOH HOH . 
BA 7 HOH A 8 208 48 HOH HOH . 
BA 7 HOH A 9 209 49 HOH HOH . 
BA 7 HOH A 10 210 58 HOH HOH . 
BA 7 HOH A 11 211 62 HOH HOH . 
BA 7 HOH A 12 212 68 HOH HOH . 
BA 7 HOH A 13 213 74 HOH HOH . 
BA 7 HOH A 14 214 78 HOH HOH . 
BA 7 HOH A 15 215 89 HOH HOH . 
BA 7 HOH A 16 216 91 HOH HOH . 
BA 7 HOH A 17 217 97 HOH HOH . 
BA 7 HOH A 18 218 104 HOH HOH . 
BA 7 HOH A 19 219 105 HOH HOH . 
BA 7 HOH A 20 220 120 HOH HOH . 
BA 7 HOH A 21 221 121 HOH HOH . 
BA 7 HOH A 22 222 136 HOH HOH . 
BA 7 HOH A 23 223 145 HOH HOH . 
BA 7 HOH A 24 224 146 HOH HOH . 
BA 7 HOH A 25 225 149 HOH HOH . 
BA 7 HOH A 26 226 154 HOH HOH . 
BA 7 HOH A 27 227 156 HOH HOH . 
BA 7 HOH A 28 228 161 HOH HOH . 
BA 7 HOH A 29 229 164 HOH HOH . 
BA 7 HOH A 30 230 165 HOH HOH . 
BA 7 HOH A 31 231 169 HOH HOH . 
BA 7 HOH A 32 232 170 HOH HOH . 
BA 7 HOH A 33 233 171 HOH HOH . 
BA 7 HOH A 34 234 175 HOH HOH . 
BA 7 HOH A 35 235 177 HOH HOH . 
BA 7 HOH A 36 236 184 HOH HOH . 
BA 7 HOH A 37 237 185 HOH HOH . 
BA 7 HOH A 38 238 195 HOH HOH . 
BA 7 HOH A 39 239 196 HOH HOH . 
BA 7 HOH A 40 240 205 HOH HOH . 
BA 7 HOH A 41 241 208 HOH HOH . 
BA 7 HOH A 42 242 210 HOH HOH . 
BA 7 HOH A 43 243 226 HOH HOH . 
BA 7 HOH A 44 244 229 HOH HOH . 
BA 7 HOH A 45 245 232 HOH HOH . 
BA 7 HOH A 46 246 233 HOH HOH . 
BA 7 HOH A 47 247 239 HOH HOH . 
BA 7 HOH A 48 248 241 HOH HOH . 
BA 7 HOH A 49 249 243 HOH HOH . 
BA 7 HOH A 50 250 267 HOH HOH . 
BA 7 HOH A 51 251 274 HOH HOH . 
BA 7 HOH A 52 252 283 HOH HOH . 
BA 7 HOH A 53 253 304 HOH HOH . 
BA 7 HOH A 54 254 330 HOH HOH . 
BA 7 HOH A 55 255 331 HOH HOH . 
BA 7 HOH A 56 256 334 HOH HOH . 
BA 7 HOH A 57 257 341 HOH HOH . 
BA 7 HOH A 58 258 342 HOH HOH . 
BA 7 HOH A 59 259 344 HOH HOH . 
BA 7 HOH A 60 260 346 HOH HOH . 
BA 7 HOH A 61 261 358 HOH HOH . 
BA 7 HOH A 62 262 361 HOH HOH . 
CA 7 HOH B 1 201 3 HOH HOH . 
CA 7 HOH B 2 202 4 HOH HOH . 
CA 7 HOH B 3 203 7 HOH HOH . 
CA 7 HOH B 4 204 27 HOH HOH . 
CA 7 HOH B 5 205 28 HOH HOH . 
CA 7 HOH B 6 206 37 HOH HOH . 
CA 7 HOH B 7 207 39 HOH HOH . 
CA 7 HOH B 8 208 61 HOH HOH . 
CA 7 HOH B 9 209 63 HOH HOH . 
CA 7 HOH B 10 210 70 HOH HOH . 
CA 7 HOH B 11 211 72 HOH HOH . 
CA 7 HOH B 12 212 73 HOH HOH . 
CA 7 HOH B 13 213 79 HOH HOH . 
CA 7 HOH B 14 214 80 HOH HOH . 
CA 7 HOH B 15 215 87 HOH HOH . 
CA 7 HOH B 16 216 96 HOH HOH . 
CA 7 HOH B 17 217 116 HOH HOH . 
CA 7 HOH B 18 218 122 HOH HOH . 
CA 7 HOH B 19 219 129 HOH HOH . 
CA 7 HOH B 20 220 134 HOH HOH . 
CA 7 HOH B 21 221 137 HOH HOH . 
CA 7 HOH B 22 222 141 HOH HOH . 
CA 7 HOH B 23 223 159 HOH HOH . 
CA 7 HOH B 24 224 162 HOH HOH . 
CA 7 HOH B 25 225 173 HOH HOH . 
CA 7 HOH B 26 226 179 HOH HOH . 
CA 7 HOH B 27 227 186 HOH HOH . 
CA 7 HOH B 28 228 188 HOH HOH . 
CA 7 HOH B 29 229 189 HOH HOH . 
CA 7 HOH B 30 230 206 HOH HOH . 
CA 7 HOH B 31 231 218 HOH HOH . 
CA 7 HOH B 32 232 220 HOH HOH . 
CA 7 HOH B 33 233 227 HOH HOH . 
CA 7 HOH B 34 234 237 HOH HOH . 
CA 7 HOH B 35 235 252 HOH HOH . 
CA 7 HOH B 36 236 262 HOH HOH . 
CA 7 HOH B 37 237 269 HOH HOH . 
CA 7 HOH B 38 238 311 HOH HOH . 
CA 7 HOH B 39 239 312 HOH HOH . 
CA 7 HOH B 40 240 340 HOH HOH . 
CA 7 HOH B 41 241 348 HOH HOH . 
CA 7 HOH B 42 242 349 HOH HOH . 
CA 7 HOH B 43 243 350 HOH HOH . 
CA 7 HOH B 44 244 351 HOH HOH . 
CA 7 HOH B 45 245 352 HOH HOH . 
CA 7 HOH B 46 246 353 HOH HOH . 
CA 7 HOH B 47 247 354 HOH HOH . 
CA 7 HOH B 48 248 364 HOH HOH . 
CA 7 HOH B 49 249 365 HOH HOH . 
CA 7 HOH B 50 250 322 HOH HOH . 
CA 7 HOH B 51 251 323 HOH HOH . 
DA 7 HOH C 1 201 14 HOH HOH . 
DA 7 HOH C 2 202 34 HOH HOH . 
DA 7 HOH C 3 203 41 HOH HOH . 
DA 7 HOH C 4 204 45 HOH HOH . 
DA 7 HOH C 5 205 53 HOH HOH . 
DA 7 HOH C 6 206 71 HOH HOH . 
DA 7 HOH C 7 207 75 HOH HOH . 
DA 7 HOH C 8 208 86 HOH HOH . 
DA 7 HOH C 9 209 88 HOH HOH . 
DA 7 HOH C 10 210 90 HOH HOH . 
DA 7 HOH C 11 211 99 HOH HOH . 
DA 7 HOH C 12 212 106 HOH HOH . 
DA 7 HOH C 13 213 107 HOH HOH . 
DA 7 HOH C 14 214 108 HOH HOH . 
DA 7 HOH C 15 215 113 HOH HOH . 
DA 7 HOH C 16 216 124 HOH HOH . 
DA 7 HOH C 17 217 133 HOH HOH . 
DA 7 HOH C 18 218 139 HOH HOH . 
DA 7 HOH C 19 219 140 HOH HOH . 
DA 7 HOH C 20 220 143 HOH HOH . 
DA 7 HOH C 21 221 147 HOH HOH . 
DA 7 HOH C 22 222 151 HOH HOH . 
DA 7 HOH C 23 223 168 HOH HOH . 
DA 7 HOH C 24 224 194 HOH HOH . 
DA 7 HOH C 25 225 201 HOH HOH . 
DA 7 HOH C 26 226 202 HOH HOH . 
DA 7 HOH C 27 227 230 HOH HOH . 
DA 7 HOH C 28 228 235 HOH HOH . 
DA 7 HOH C 29 229 245 HOH HOH . 
DA 7 HOH C 30 230 246 HOH HOH . 
DA 7 HOH C 31 231 253 HOH HOH . 
DA 7 HOH C 32 232 257 HOH HOH . 
DA 7 HOH C 33 233 265 HOH HOH . 
DA 7 HOH C 34 234 275 HOH HOH . 
DA 7 HOH C 35 235 280 HOH HOH . 
DA 7 HOH C 36 236 286 HOH HOH . 
DA 7 HOH C 37 237 314 HOH HOH . 
DA 7 HOH C 38 238 315 HOH HOH . 
DA 7 HOH C 39 239 316 HOH HOH . 
DA 7 HOH C 40 240 317 HOH HOH . 
DA 7 HOH C 41 241 318 HOH HOH . 
DA 7 HOH C 42 242 319 HOH HOH . 
DA 7 HOH C 43 243 336 HOH HOH . 
EA 7 HOH D 1 201 343 HOH HOH . 
EA 7 HOH D 2 202 8 HOH HOH . 
EA 7 HOH D 3 203 9 HOH HOH . 
EA 7 HOH D 4 204 11 HOH HOH . 
EA 7 HOH D 5 205 32 HOH HOH . 
EA 7 HOH D 6 206 51 HOH HOH . 
EA 7 HOH D 7 207 55 HOH HOH . 
EA 7 HOH D 8 208 81 HOH HOH . 
EA 7 HOH D 9 209 82 HOH HOH . 
EA 7 HOH D 10 210 94 HOH HOH . 
EA 7 HOH D 11 211 101 HOH HOH . 
EA 7 HOH D 12 212 112 HOH HOH . 
EA 7 HOH D 13 213 119 HOH HOH . 
EA 7 HOH D 14 214 127 HOH HOH . 
EA 7 HOH D 15 215 128 HOH HOH . 
EA 7 HOH D 16 216 135 HOH HOH . 
EA 7 HOH D 17 217 142 HOH HOH . 
EA 7 HOH D 18 218 160 HOH HOH . 
EA 7 HOH D 19 219 163 HOH HOH . 
EA 7 HOH D 20 220 178 HOH HOH . 
EA 7 HOH D 21 221 180 HOH HOH . 
EA 7 HOH D 22 222 181 HOH HOH . 
EA 7 HOH D 23 223 182 HOH HOH . 
EA 7 HOH D 24 224 198 HOH HOH . 
EA 7 HOH D 25 225 212 HOH HOH . 
EA 7 HOH D 26 226 214 HOH HOH . 
EA 7 HOH D 27 227 219 HOH HOH . 
EA 7 HOH D 28 228 223 HOH HOH . 
EA 7 HOH D 29 229 238 HOH HOH . 
EA 7 HOH D 30 230 244 HOH HOH . 
EA 7 HOH D 31 231 268 HOH HOH . 
EA 7 HOH D 32 232 271 HOH HOH . 
EA 7 HOH D 33 233 273 HOH HOH . 
EA 7 HOH D 34 234 293 HOH HOH . 
EA 7 HOH D 35 235 294 HOH HOH . 
EA 7 HOH D 36 236 295 HOH HOH . 
EA 7 HOH D 37 237 303 HOH HOH . 
EA 7 HOH D 38 238 306 HOH HOH . 
EA 7 HOH D 39 239 324 HOH HOH . 
EA 7 HOH D 40 240 326 HOH HOH . 
EA 7 HOH D 41 241 327 HOH HOH . 
EA 7 HOH D 42 242 328 HOH HOH . 
EA 7 HOH D 43 243 337 HOH HOH . 
EA 7 HOH D 44 244 338 HOH HOH . 
EA 7 HOH D 45 245 339 HOH HOH . 
EA 7 HOH D 46 246 357 HOH HOH . 
FA 7 HOH E 1 201 17 HOH HOH . 
FA 7 HOH E 2 202 93 HOH HOH . 
FA 7 HOH E 3 203 117 HOH HOH . 
FA 7 HOH E 4 204 152 HOH HOH . 
FA 7 HOH E 5 205 203 HOH HOH . 
FA 7 HOH E 6 206 333 HOH HOH . 
FA 7 HOH E 7 207 360 HOH HOH . 
GA 7 HOH F 1 101 59 HOH HOH . 
GA 7 HOH F 2 102 118 HOH HOH . 
GA 7 HOH F 3 103 130 HOH HOH . 
GA 7 HOH F 4 104 320 HOH HOH . 
GA 7 HOH F 5 105 321 HOH HOH . 
GA 7 HOH F 6 106 329 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 -22.199 -6.796 -14.937 1 37.98 ? C1 GOL 102 A 1 
HETATM 2 O O1 GOL . . . H 3 -23.295 -7.598 -14.469 1 39.63 ? O1 GOL 102 A 1 
HETATM 3 C C2 GOL . . . H 3 -21.048 -7.138 -14.013 1 35.85 ? C2 GOL 102 A 1 
HETATM 4 O O2 GOL . . . H 3 -21.081 -8.538 -13.977 1 28.38 ? O2 GOL 102 A 1 
HETATM 5 C C3 GOL . . . H 3 -19.629 -6.891 -14.475 1 34.22 ? C3 GOL 102 A 1 
HETATM 6 O O3 GOL . . . H 3 -18.806 -7.672 -13.602 1 30.71 ? O3 GOL 102 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#