data_4OBJ
#
_model_server_result.job_id            RiSo1frM5bKY1cJMAYSNKQ 
_model_server_result.datetime_utc      '2024-10-09 23:32:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4obj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":105}' 
#
_entry.id    4OBJ 
#
_exptl.entry_id    4OBJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4OBJ 
_cell.length_a            50.884 
_cell.length_b            58.395 
_cell.length_c            61.505 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4OBJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 H N N 
? 5 J N N 
? 5 K N N 
? 5 N N N 
? 5 O N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 89 n n 
C1 C2 EDO sing 90 n n 
C1 H11 EDO sing 91 n n 
C1 H12 EDO sing 92 n n 
O1 HO1 EDO sing 93 n n 
C2 O2 EDO sing 94 n n 
C2 H21 EDO sing 95 n n 
C2 H22 EDO sing 96 n n 
O2 HO2 EDO sing 97 n n 
#
_atom_sites.entry_id                     4OBJ 
_atom_sites.fract_transf_matrix[1][1]    0.019653 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017125 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016259 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 GOL A 1 101 1 GOL GOL . 
E 4 ACT A 1 102 1 ACT ACT . 
F 4 ACT A 1 103 1 ACT ACT . 
G 5 EDO A 1 104 1 EDO EDO . 
H 5 EDO A 1 105 1 EDO EDO . 
I 3 GOL A 1 106 1 GOL GOL . 
J 5 EDO B 1 101 1 EDO EDO . 
K 5 EDO B 1 102 1 EDO EDO . 
L 4 ACT B 1 103 505 ACT ACT . 
M 3 GOL B 1 104 1 GOL GOL . 
N 5 EDO B 1 105 1 EDO EDO . 
O 5 EDO B 1 106 1 EDO EDO . 
P 6 HOH A 1 201 1 HOH HOH . 
P 6 HOH A 2 202 2 HOH HOH . 
P 6 HOH A 3 203 5 HOH HOH . 
P 6 HOH A 4 204 7 HOH HOH . 
P 6 HOH A 5 205 18 HOH HOH . 
P 6 HOH A 6 206 20 HOH HOH . 
P 6 HOH A 7 207 26 HOH HOH . 
P 6 HOH A 8 208 27 HOH HOH . 
P 6 HOH A 9 209 35 HOH HOH . 
P 6 HOH A 10 210 36 HOH HOH . 
P 6 HOH A 11 211 41 HOH HOH . 
P 6 HOH A 12 212 42 HOH HOH . 
P 6 HOH A 13 213 45 HOH HOH . 
P 6 HOH A 14 214 47 HOH HOH . 
P 6 HOH A 15 215 49 HOH HOH . 
P 6 HOH A 16 216 53 HOH HOH . 
P 6 HOH A 17 217 56 HOH HOH . 
P 6 HOH A 18 218 58 HOH HOH . 
P 6 HOH A 19 219 61 HOH HOH . 
P 6 HOH A 20 220 66 HOH HOH . 
P 6 HOH A 21 221 67 HOH HOH . 
P 6 HOH A 22 222 68 HOH HOH . 
P 6 HOH A 23 223 71 HOH HOH . 
P 6 HOH A 24 224 78 HOH HOH . 
P 6 HOH A 25 225 80 HOH HOH . 
P 6 HOH A 26 226 83 HOH HOH . 
P 6 HOH A 27 227 84 HOH HOH . 
P 6 HOH A 28 228 96 HOH HOH . 
P 6 HOH A 29 229 97 HOH HOH . 
P 6 HOH A 30 230 98 HOH HOH . 
P 6 HOH A 31 231 101 HOH HOH . 
P 6 HOH A 32 232 102 HOH HOH . 
P 6 HOH A 33 233 104 HOH HOH . 
P 6 HOH A 34 234 107 HOH HOH . 
P 6 HOH A 35 235 109 HOH HOH . 
P 6 HOH A 36 236 115 HOH HOH . 
P 6 HOH A 37 237 117 HOH HOH . 
P 6 HOH A 38 238 120 HOH HOH . 
P 6 HOH A 39 239 126 HOH HOH . 
P 6 HOH A 40 240 129 HOH HOH . 
P 6 HOH A 41 241 134 HOH HOH . 
P 6 HOH A 42 242 136 HOH HOH . 
P 6 HOH A 43 243 138 HOH HOH . 
P 6 HOH A 44 244 139 HOH HOH . 
P 6 HOH A 45 245 140 HOH HOH . 
P 6 HOH A 46 246 142 HOH HOH . 
P 6 HOH A 47 247 144 HOH HOH . 
P 6 HOH A 48 248 151 HOH HOH . 
P 6 HOH A 49 249 156 HOH HOH . 
P 6 HOH A 50 250 160 HOH HOH . 
P 6 HOH A 51 251 161 HOH HOH . 
P 6 HOH A 52 252 165 HOH HOH . 
P 6 HOH A 53 253 169 HOH HOH . 
P 6 HOH A 54 254 176 HOH HOH . 
P 6 HOH A 55 255 181 HOH HOH . 
P 6 HOH A 56 256 182 HOH HOH . 
P 6 HOH A 57 257 185 HOH HOH . 
P 6 HOH A 58 258 193 HOH HOH . 
P 6 HOH A 59 259 194 HOH HOH . 
P 6 HOH A 60 260 204 HOH HOH . 
P 6 HOH A 61 261 207 HOH HOH . 
P 6 HOH A 62 262 210 HOH HOH . 
P 6 HOH A 63 263 211 HOH HOH . 
P 6 HOH A 64 264 212 HOH HOH . 
P 6 HOH A 65 265 216 HOH HOH . 
P 6 HOH A 66 266 217 HOH HOH . 
P 6 HOH A 67 267 218 HOH HOH . 
P 6 HOH A 68 268 219 HOH HOH . 
P 6 HOH A 69 269 220 HOH HOH . 
P 6 HOH A 70 270 221 HOH HOH . 
P 6 HOH A 71 271 222 HOH HOH . 
P 6 HOH A 72 272 225 HOH HOH . 
P 6 HOH A 73 273 233 HOH HOH . 
P 6 HOH A 74 274 236 HOH HOH . 
P 6 HOH A 75 275 237 HOH HOH . 
P 6 HOH A 76 276 238 HOH HOH . 
P 6 HOH A 77 277 239 HOH HOH . 
P 6 HOH A 78 278 242 HOH HOH . 
P 6 HOH A 79 279 246 HOH HOH . 
P 6 HOH A 80 280 247 HOH HOH . 
P 6 HOH A 81 281 248 HOH HOH . 
P 6 HOH A 82 282 249 HOH HOH . 
P 6 HOH A 83 283 250 HOH HOH . 
P 6 HOH A 84 284 251 HOH HOH . 
P 6 HOH A 85 285 254 HOH HOH . 
P 6 HOH A 86 286 256 HOH HOH . 
Q 6 HOH B 1 201 205 HOH HOH . 
Q 6 HOH B 2 202 252 HOH HOH . 
Q 6 HOH B 3 203 255 HOH HOH . 
Q 6 HOH B 4 204 3 HOH HOH . 
Q 6 HOH B 5 205 12 HOH HOH . 
Q 6 HOH B 6 206 15 HOH HOH . 
Q 6 HOH B 7 207 16 HOH HOH . 
Q 6 HOH B 8 208 17 HOH HOH . 
Q 6 HOH B 9 209 19 HOH HOH . 
Q 6 HOH B 10 210 24 HOH HOH . 
Q 6 HOH B 11 211 28 HOH HOH . 
Q 6 HOH B 12 212 31 HOH HOH . 
Q 6 HOH B 13 213 33 HOH HOH . 
Q 6 HOH B 14 214 34 HOH HOH . 
Q 6 HOH B 15 215 37 HOH HOH . 
Q 6 HOH B 16 216 38 HOH HOH . 
Q 6 HOH B 17 217 39 HOH HOH . 
Q 6 HOH B 18 218 48 HOH HOH . 
Q 6 HOH B 19 219 51 HOH HOH . 
Q 6 HOH B 20 220 55 HOH HOH . 
Q 6 HOH B 21 221 57 HOH HOH . 
Q 6 HOH B 22 222 60 HOH HOH . 
Q 6 HOH B 23 223 64 HOH HOH . 
Q 6 HOH B 24 224 70 HOH HOH . 
Q 6 HOH B 25 225 74 HOH HOH . 
Q 6 HOH B 26 226 76 HOH HOH . 
Q 6 HOH B 27 227 77 HOH HOH . 
Q 6 HOH B 28 228 79 HOH HOH . 
Q 6 HOH B 29 229 85 HOH HOH . 
Q 6 HOH B 30 230 87 HOH HOH . 
Q 6 HOH B 31 231 91 HOH HOH . 
Q 6 HOH B 32 232 92 HOH HOH . 
Q 6 HOH B 33 233 94 HOH HOH . 
Q 6 HOH B 34 234 103 HOH HOH . 
Q 6 HOH B 35 235 105 HOH HOH . 
Q 6 HOH B 36 236 106 HOH HOH . 
Q 6 HOH B 37 237 111 HOH HOH . 
Q 6 HOH B 38 238 112 HOH HOH . 
Q 6 HOH B 39 239 113 HOH HOH . 
Q 6 HOH B 40 240 116 HOH HOH . 
Q 6 HOH B 41 241 124 HOH HOH . 
Q 6 HOH B 42 242 125 HOH HOH . 
Q 6 HOH B 43 243 131 HOH HOH . 
Q 6 HOH B 44 244 132 HOH HOH . 
Q 6 HOH B 45 245 148 HOH HOH . 
Q 6 HOH B 46 246 155 HOH HOH . 
Q 6 HOH B 47 247 157 HOH HOH . 
Q 6 HOH B 48 248 175 HOH HOH . 
Q 6 HOH B 49 249 184 HOH HOH . 
Q 6 HOH B 50 250 191 HOH HOH . 
Q 6 HOH B 51 251 202 HOH HOH . 
Q 6 HOH B 52 252 206 HOH HOH . 
Q 6 HOH B 53 253 223 HOH HOH . 
Q 6 HOH B 54 254 224 HOH HOH . 
Q 6 HOH B 55 255 226 HOH HOH . 
Q 6 HOH B 56 256 227 HOH HOH . 
Q 6 HOH B 57 257 229 HOH HOH . 
Q 6 HOH B 58 258 230 HOH HOH . 
Q 6 HOH B 59 259 235 HOH HOH . 
Q 6 HOH B 60 260 243 HOH HOH . 
Q 6 HOH B 61 261 244 HOH HOH . 
Q 6 HOH B 62 262 253 HOH HOH . 
Q 6 HOH B 63 263 257 HOH HOH . 
Q 6 HOH B 64 264 258 HOH HOH . 
Q 6 HOH B 65 265 259 HOH HOH . 
R 6 HOH C 1 101 198 HOH HOH . 
R 6 HOH C 2 102 8 HOH HOH . 
R 6 HOH C 3 103 99 HOH HOH . 
R 6 HOH C 4 104 122 HOH HOH . 
R 6 HOH C 5 105 135 HOH HOH . 
R 6 HOH C 6 106 162 HOH HOH . 
R 6 HOH C 7 107 167 HOH HOH . 
R 6 HOH C 8 108 170 HOH HOH . 
R 6 HOH C 9 109 215 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . N 5 20.844 12.798 19.522 1 13.47 ? C1 EDO 105 B 1 
HETATM 2 O O1 EDO . . . N 5 22.011 12.374 18.787 1 21 ? O1 EDO 105 B 1 
HETATM 3 C C2 EDO . . . N 5 19.773 12.866 18.509 1 14.26 ? C2 EDO 105 B 1 
HETATM 4 O O2 EDO . . . N 5 18.531 12.608 19.129 1 33.94 ? O2 EDO 105 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#