data_4OCE # _model_server_result.job_id 741D7w5Hblga5PdAjXeKxw _model_server_result.datetime_utc '2024-11-16 11:49:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oce # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4OCE # _exptl.entry_id 4OCE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.046 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MALONATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OCE _cell.length_a 37.83 _cell.length_b 37.83 _cell.length_c 298.45 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 32 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 30 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 35 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 33 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.03 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H2 O4 -2' _chem_comp.formula_weight 102.046 _chem_comp.id MLI _chem_comp.mon_nstd_flag . _chem_comp.name 'MALONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MLI sing 237 n n C1 C3 MLI sing 238 n n C1 H11 MLI sing 239 n n C1 H12 MLI sing 240 n n C2 O6 MLI doub 241 n n C2 O7 MLI sing 242 n n C3 O8 MLI doub 243 n n C3 O9 MLI sing 244 n n # _atom_sites.entry_id 4OCE _atom_sites.fract_transf_matrix[1][1] 0.026434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003351 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MLI A 1 201 1 MLI MLI . C 3 HOH A 1 301 1 HOH HOH . C 3 HOH A 2 302 2 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 5 HOH HOH . C 3 HOH A 6 306 6 HOH HOH . C 3 HOH A 7 307 7 HOH HOH . C 3 HOH A 8 308 8 HOH HOH . C 3 HOH A 9 309 9 HOH HOH . C 3 HOH A 10 310 10 HOH HOH . C 3 HOH A 11 311 11 HOH HOH . C 3 HOH A 12 312 12 HOH HOH . C 3 HOH A 13 313 13 HOH HOH . C 3 HOH A 14 314 14 HOH HOH . C 3 HOH A 15 315 15 HOH HOH . C 3 HOH A 16 316 16 HOH HOH . C 3 HOH A 17 317 17 HOH HOH . C 3 HOH A 18 318 18 HOH HOH . C 3 HOH A 19 319 19 HOH HOH . C 3 HOH A 20 320 20 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 22 HOH HOH . C 3 HOH A 23 323 23 HOH HOH . C 3 HOH A 24 324 24 HOH HOH . C 3 HOH A 25 325 25 HOH HOH . C 3 HOH A 26 326 26 HOH HOH . C 3 HOH A 27 327 27 HOH HOH . C 3 HOH A 28 328 28 HOH HOH . C 3 HOH A 29 329 29 HOH HOH . C 3 HOH A 30 330 30 HOH HOH . C 3 HOH A 31 331 31 HOH HOH . C 3 HOH A 32 332 32 HOH HOH . C 3 HOH A 33 333 33 HOH HOH . C 3 HOH A 34 334 34 HOH HOH . C 3 HOH A 35 335 35 HOH HOH . C 3 HOH A 36 336 36 HOH HOH . C 3 HOH A 37 337 37 HOH HOH . C 3 HOH A 38 338 38 HOH HOH . C 3 HOH A 39 339 39 HOH HOH . C 3 HOH A 40 340 40 HOH HOH . C 3 HOH A 41 341 41 HOH HOH . C 3 HOH A 42 342 42 HOH HOH . C 3 HOH A 43 343 43 HOH HOH . C 3 HOH A 44 344 44 HOH HOH . C 3 HOH A 45 345 45 HOH HOH . C 3 HOH A 46 346 46 HOH HOH . C 3 HOH A 47 347 47 HOH HOH . C 3 HOH A 48 348 48 HOH HOH . C 3 HOH A 49 349 49 HOH HOH . C 3 HOH A 50 350 50 HOH HOH . C 3 HOH A 51 351 51 HOH HOH . C 3 HOH A 52 352 52 HOH HOH . C 3 HOH A 53 353 53 HOH HOH . C 3 HOH A 54 354 54 HOH HOH . C 3 HOH A 55 355 55 HOH HOH . C 3 HOH A 56 356 56 HOH HOH . C 3 HOH A 57 357 57 HOH HOH . C 3 HOH A 58 358 58 HOH HOH . C 3 HOH A 59 359 59 HOH HOH . C 3 HOH A 60 360 60 HOH HOH . C 3 HOH A 61 361 61 HOH HOH . C 3 HOH A 62 362 62 HOH HOH . C 3 HOH A 63 363 63 HOH HOH . C 3 HOH A 64 364 64 HOH HOH . C 3 HOH A 65 365 65 HOH HOH . C 3 HOH A 66 366 66 HOH HOH . C 3 HOH A 67 367 67 HOH HOH . C 3 HOH A 68 368 68 HOH HOH . C 3 HOH A 69 369 69 HOH HOH . C 3 HOH A 70 370 70 HOH HOH . C 3 HOH A 71 371 71 HOH HOH . C 3 HOH A 72 372 72 HOH HOH . C 3 HOH A 73 373 73 HOH HOH . C 3 HOH A 74 374 74 HOH HOH . C 3 HOH A 75 375 75 HOH HOH . C 3 HOH A 76 376 76 HOH HOH . C 3 HOH A 77 377 77 HOH HOH . C 3 HOH A 78 378 78 HOH HOH . C 3 HOH A 79 379 79 HOH HOH . C 3 HOH A 80 380 80 HOH HOH . C 3 HOH A 81 381 81 HOH HOH . C 3 HOH A 82 382 82 HOH HOH . C 3 HOH A 83 383 83 HOH HOH . C 3 HOH A 84 384 84 HOH HOH . C 3 HOH A 85 385 85 HOH HOH . C 3 HOH A 86 386 86 HOH HOH . C 3 HOH A 87 387 87 HOH HOH . C 3 HOH A 88 388 88 HOH HOH . C 3 HOH A 89 389 89 HOH HOH . C 3 HOH A 90 390 90 HOH HOH . C 3 HOH A 91 391 91 HOH HOH . C 3 HOH A 92 392 92 HOH HOH . C 3 HOH A 93 393 93 HOH HOH . C 3 HOH A 94 394 94 HOH HOH . C 3 HOH A 95 395 96 HOH HOH . C 3 HOH A 96 396 97 HOH HOH . C 3 HOH A 97 397 98 HOH HOH . C 3 HOH A 98 398 99 HOH HOH . C 3 HOH A 99 399 100 HOH HOH . C 3 HOH A 100 400 101 HOH HOH . C 3 HOH A 101 401 102 HOH HOH . C 3 HOH A 102 402 103 HOH HOH . C 3 HOH A 103 403 104 HOH HOH . C 3 HOH A 104 404 105 HOH HOH . C 3 HOH A 105 405 107 HOH HOH . C 3 HOH A 106 406 108 HOH HOH . C 3 HOH A 107 407 109 HOH HOH . C 3 HOH A 108 408 110 HOH HOH . C 3 HOH A 109 409 111 HOH HOH . C 3 HOH A 110 410 112 HOH HOH . C 3 HOH A 111 411 113 HOH HOH . C 3 HOH A 112 412 114 HOH HOH . C 3 HOH A 113 413 115 HOH HOH . C 3 HOH A 114 414 116 HOH HOH . C 3 HOH A 115 415 117 HOH HOH . C 3 HOH A 116 416 118 HOH HOH . C 3 HOH A 117 417 119 HOH HOH . C 3 HOH A 118 418 120 HOH HOH . C 3 HOH A 119 419 121 HOH HOH . C 3 HOH A 120 420 122 HOH HOH . C 3 HOH A 121 421 123 HOH HOH . C 3 HOH A 122 422 124 HOH HOH . C 3 HOH A 123 423 125 HOH HOH . C 3 HOH A 124 424 126 HOH HOH . C 3 HOH A 125 425 127 HOH HOH . C 3 HOH A 126 426 129 HOH HOH . C 3 HOH A 127 427 130 HOH HOH . C 3 HOH A 128 428 131 HOH HOH . C 3 HOH A 129 429 132 HOH HOH . C 3 HOH A 130 430 134 HOH HOH . C 3 HOH A 131 431 135 HOH HOH . C 3 HOH A 132 432 136 HOH HOH . C 3 HOH A 133 433 137 HOH HOH . C 3 HOH A 134 434 138 HOH HOH . C 3 HOH A 135 435 139 HOH HOH . C 3 HOH A 136 436 140 HOH HOH . C 3 HOH A 137 437 141 HOH HOH . C 3 HOH A 138 438 142 HOH HOH . C 3 HOH A 139 439 143 HOH HOH . C 3 HOH A 140 440 144 HOH HOH . C 3 HOH A 141 441 145 HOH HOH . C 3 HOH A 142 442 146 HOH HOH . C 3 HOH A 143 443 147 HOH HOH . C 3 HOH A 144 444 148 HOH HOH . C 3 HOH A 145 445 149 HOH HOH . C 3 HOH A 146 446 150 HOH HOH . C 3 HOH A 147 447 151 HOH HOH . C 3 HOH A 148 448 152 HOH HOH . C 3 HOH A 149 449 153 HOH HOH . C 3 HOH A 150 450 154 HOH HOH . C 3 HOH A 151 451 155 HOH HOH . C 3 HOH A 152 452 156 HOH HOH . C 3 HOH A 153 453 157 HOH HOH . C 3 HOH A 154 454 158 HOH HOH . C 3 HOH A 155 455 159 HOH HOH . C 3 HOH A 156 456 160 HOH HOH . C 3 HOH A 157 457 161 HOH HOH . C 3 HOH A 158 458 162 HOH HOH . C 3 HOH A 159 459 163 HOH HOH . C 3 HOH A 160 460 164 HOH HOH . C 3 HOH A 161 461 165 HOH HOH . C 3 HOH A 162 462 166 HOH HOH . C 3 HOH A 163 463 167 HOH HOH . C 3 HOH A 164 464 168 HOH HOH . C 3 HOH A 165 465 169 HOH HOH . C 3 HOH A 166 466 170 HOH HOH . C 3 HOH A 167 467 171 HOH HOH . C 3 HOH A 168 468 172 HOH HOH . C 3 HOH A 169 469 173 HOH HOH . C 3 HOH A 170 470 174 HOH HOH . C 3 HOH A 171 471 175 HOH HOH . C 3 HOH A 172 472 176 HOH HOH . C 3 HOH A 173 473 177 HOH HOH . C 3 HOH A 174 474 178 HOH HOH . C 3 HOH A 175 475 179 HOH HOH . C 3 HOH A 176 476 180 HOH HOH . C 3 HOH A 177 477 181 HOH HOH . C 3 HOH A 178 478 182 HOH HOH . C 3 HOH A 179 479 183 HOH HOH . C 3 HOH A 180 480 184 HOH HOH . C 3 HOH A 181 481 185 HOH HOH . C 3 HOH A 182 482 186 HOH HOH . C 3 HOH A 183 483 187 HOH HOH . C 3 HOH A 184 484 188 HOH HOH . C 3 HOH A 185 485 189 HOH HOH . C 3 HOH A 186 486 190 HOH HOH . C 3 HOH A 187 487 191 HOH HOH . C 3 HOH A 188 488 192 HOH HOH . C 3 HOH A 189 489 193 HOH HOH . C 3 HOH A 190 490 194 HOH HOH . C 3 HOH A 191 491 195 HOH HOH . C 3 HOH A 192 492 196 HOH HOH . C 3 HOH A 193 493 197 HOH HOH . C 3 HOH A 194 494 198 HOH HOH . C 3 HOH A 195 495 199 HOH HOH . C 3 HOH A 196 496 200 HOH HOH . C 3 HOH A 197 497 201 HOH HOH . C 3 HOH A 198 498 202 HOH HOH . C 3 HOH A 199 499 203 HOH HOH . C 3 HOH A 200 500 204 HOH HOH . C 3 HOH A 201 501 205 HOH HOH . C 3 HOH A 202 502 206 HOH HOH . C 3 HOH A 203 503 207 HOH HOH . C 3 HOH A 204 504 208 HOH HOH . C 3 HOH A 205 505 209 HOH HOH . C 3 HOH A 206 506 210 HOH HOH . C 3 HOH A 207 507 211 HOH HOH . C 3 HOH A 208 508 212 HOH HOH . C 3 HOH A 209 509 213 HOH HOH . C 3 HOH A 210 510 214 HOH HOH . C 3 HOH A 211 511 215 HOH HOH . C 3 HOH A 212 512 216 HOH HOH . C 3 HOH A 213 513 220 HOH HOH . C 3 HOH A 214 514 221 HOH HOH . C 3 HOH A 215 515 222 HOH HOH . C 3 HOH A 216 516 223 HOH HOH . C 3 HOH A 217 517 224 HOH HOH . C 3 HOH A 218 518 225 HOH HOH . C 3 HOH A 219 519 226 HOH HOH . C 3 HOH A 220 520 227 HOH HOH . C 3 HOH A 221 521 228 HOH HOH . C 3 HOH A 222 522 229 HOH HOH . C 3 HOH A 223 523 230 HOH HOH . C 3 HOH A 224 524 231 HOH HOH . C 3 HOH A 225 525 232 HOH HOH . C 3 HOH A 226 526 233 HOH HOH . C 3 HOH A 227 527 234 HOH HOH . C 3 HOH A 228 528 235 HOH HOH . C 3 HOH A 229 529 236 HOH HOH . C 3 HOH A 230 530 237 HOH HOH . C 3 HOH A 231 531 238 HOH HOH . C 3 HOH A 232 532 239 HOH HOH . C 3 HOH A 233 533 240 HOH HOH . C 3 HOH A 234 534 241 HOH HOH . C 3 HOH A 235 535 242 HOH HOH . C 3 HOH A 236 536 243 HOH HOH . C 3 HOH A 237 537 244 HOH HOH . C 3 HOH A 238 538 245 HOH HOH . C 3 HOH A 239 539 246 HOH HOH . C 3 HOH A 240 540 247 HOH HOH . C 3 HOH A 241 541 248 HOH HOH . C 3 HOH A 242 542 249 HOH HOH . C 3 HOH A 243 543 250 HOH HOH . C 3 HOH A 244 544 251 HOH HOH . C 3 HOH A 245 545 252 HOH HOH . C 3 HOH A 246 546 254 HOH HOH . C 3 HOH A 247 547 255 HOH HOH . C 3 HOH A 248 548 262 HOH HOH . C 3 HOH A 249 549 263 HOH HOH . C 3 HOH A 250 550 265 HOH HOH . C 3 HOH A 251 551 266 HOH HOH . C 3 HOH A 252 552 267 HOH HOH . C 3 HOH A 253 553 268 HOH HOH . C 3 HOH A 254 554 269 HOH HOH . C 3 HOH A 255 555 270 HOH HOH . C 3 HOH A 256 556 271 HOH HOH . C 3 HOH A 257 557 272 HOH HOH . C 3 HOH A 258 558 273 HOH HOH . C 3 HOH A 259 559 274 HOH HOH . C 3 HOH A 260 560 275 HOH HOH . C 3 HOH A 261 561 276 HOH HOH . C 3 HOH A 262 562 277 HOH HOH . C 3 HOH A 263 563 278 HOH HOH . C 3 HOH A 264 564 279 HOH HOH . C 3 HOH A 265 565 280 HOH HOH . C 3 HOH A 266 566 281 HOH HOH . C 3 HOH A 267 567 283 HOH HOH . C 3 HOH A 268 568 284 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLI . . . B 2 9.096 40.645 319.091 1 6.54 ? C1 MLI 201 A 1 HETATM 2 C C2 MLI . . . B 2 8.051 39.815 319.74 1 6.23 ? C2 MLI 201 A 1 HETATM 3 C C3 MLI . . . B 2 10.245 39.915 318.514 1 10.33 ? C3 MLI 201 A 1 HETATM 4 O O6 MLI . . . B 2 8.091 38.549 319.632 1 7.65 ? O6 MLI 201 A 1 HETATM 5 O O7 MLI . . . B 2 7.147 40.37 320.41 1 6.64 ? O7 MLI 201 A 1 HETATM 6 O O8 MLI . . . B 2 10.291 38.652 318.564 1 7.45 ? O8 MLI 201 A 1 HETATM 7 O O9 MLI . . . B 2 11.165 40.562 317.972 1 10.14 ? O9 MLI 201 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 7 #