data_4OEY # _model_server_result.job_id DfDvu4EhSD0z9_S5MRbMYw _model_server_result.datetime_utc '2024-12-04 09:33:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oey # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 4OEY # _exptl.entry_id 4OEY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.44 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ALPHA-DIHYDROTESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OEY _cell.length_a 54.525 _cell.length_b 65.718 _cell.length_c 70.091 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OEY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H30 O2' _chem_comp.formula_weight 290.44 _chem_comp.id DHT _chem_comp.mon_nstd_flag . _chem_comp.name 5-ALPHA-DIHYDROTESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DHT sing 83 n n C1 C10 DHT sing 84 n n C1 H11 DHT sing 85 n n C1 H12 DHT sing 86 n n C2 C3 DHT sing 87 n n C2 H21 DHT sing 88 n n C2 H22 DHT sing 89 n n C3 O3 DHT doub 90 n n C3 C4 DHT sing 91 n n C4 C5 DHT sing 92 n n C4 H41 DHT sing 93 n n C4 H42 DHT sing 94 n n C5 C6 DHT sing 95 n n C5 C10 DHT sing 96 n n C5 H5 DHT sing 97 n n C6 C7 DHT sing 98 n n C6 H61 DHT sing 99 n n C6 H62 DHT sing 100 n n C7 C8 DHT sing 101 n n C7 H71 DHT sing 102 n n C7 H72 DHT sing 103 n n C8 C9 DHT sing 104 n n C8 C14 DHT sing 105 n n C8 H8 DHT sing 106 n n C9 C10 DHT sing 107 n n C9 C11 DHT sing 108 n n C9 H9 DHT sing 109 n n C10 C19 DHT sing 110 n n C11 C12 DHT sing 111 n n C11 H111 DHT sing 112 n n C11 H112 DHT sing 113 n n C12 C13 DHT sing 114 n n C12 H121 DHT sing 115 n n C12 H122 DHT sing 116 n n C13 C14 DHT sing 117 n n C13 C17 DHT sing 118 n n C13 C18 DHT sing 119 n n C14 C15 DHT sing 120 n n C14 H14 DHT sing 121 n n C15 C16 DHT sing 122 n n C15 H151 DHT sing 123 n n C15 H152 DHT sing 124 n n C16 C17 DHT sing 125 n n C16 H161 DHT sing 126 n n C16 H162 DHT sing 127 n n C17 O17 DHT sing 128 n n C17 H17 DHT sing 129 n n O17 HO7 DHT sing 130 n n C18 H181 DHT sing 131 n n C18 H182 DHT sing 132 n n C18 H183 DHT sing 133 n n C19 H191 DHT sing 134 n n C19 H192 DHT sing 135 n n C19 H193 DHT sing 136 n n # _atom_sites.entry_id 4OEY _atom_sites.fract_transf_matrix[1][1] 0.01834 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015217 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 1001 1 SO4 SO4 . D 4 DHT A 1 1002 2 DHT DHT . E 5 HOH A 1 1101 1 HOH HOH . E 5 HOH A 2 1102 2 HOH HOH . E 5 HOH A 3 1103 3 HOH HOH . E 5 HOH A 4 1104 4 HOH HOH . E 5 HOH A 5 1105 5 HOH HOH . E 5 HOH A 6 1106 6 HOH HOH . E 5 HOH A 7 1107 7 HOH HOH . E 5 HOH A 8 1108 8 HOH HOH . E 5 HOH A 9 1109 9 HOH HOH . E 5 HOH A 10 1110 10 HOH HOH . E 5 HOH A 11 1111 11 HOH HOH . E 5 HOH A 12 1112 12 HOH HOH . E 5 HOH A 13 1113 13 HOH HOH . E 5 HOH A 14 1114 14 HOH HOH . E 5 HOH A 15 1115 15 HOH HOH . E 5 HOH A 16 1116 16 HOH HOH . E 5 HOH A 17 1117 17 HOH HOH . E 5 HOH A 18 1118 18 HOH HOH . E 5 HOH A 19 1119 19 HOH HOH . E 5 HOH A 20 1120 20 HOH HOH . E 5 HOH A 21 1121 21 HOH HOH . E 5 HOH A 22 1122 23 HOH HOH . E 5 HOH A 23 1123 24 HOH HOH . E 5 HOH A 24 1124 25 HOH HOH . E 5 HOH A 25 1125 26 HOH HOH . E 5 HOH A 26 1126 27 HOH HOH . E 5 HOH A 27 1127 28 HOH HOH . E 5 HOH A 28 1128 29 HOH HOH . E 5 HOH A 29 1129 30 HOH HOH . E 5 HOH A 30 1130 31 HOH HOH . E 5 HOH A 31 1131 32 HOH HOH . E 5 HOH A 32 1132 33 HOH HOH . E 5 HOH A 33 1133 34 HOH HOH . E 5 HOH A 34 1134 35 HOH HOH . E 5 HOH A 35 1135 36 HOH HOH . E 5 HOH A 36 1136 37 HOH HOH . E 5 HOH A 37 1137 38 HOH HOH . E 5 HOH A 38 1138 39 HOH HOH . E 5 HOH A 39 1139 40 HOH HOH . E 5 HOH A 40 1140 41 HOH HOH . E 5 HOH A 41 1141 42 HOH HOH . E 5 HOH A 42 1142 43 HOH HOH . E 5 HOH A 43 1143 44 HOH HOH . E 5 HOH A 44 1144 45 HOH HOH . E 5 HOH A 45 1145 46 HOH HOH . E 5 HOH A 46 1146 47 HOH HOH . E 5 HOH A 47 1147 48 HOH HOH . E 5 HOH A 48 1148 50 HOH HOH . E 5 HOH A 49 1149 51 HOH HOH . E 5 HOH A 50 1150 52 HOH HOH . E 5 HOH A 51 1151 53 HOH HOH . E 5 HOH A 52 1152 54 HOH HOH . E 5 HOH A 53 1153 55 HOH HOH . E 5 HOH A 54 1154 56 HOH HOH . E 5 HOH A 55 1155 57 HOH HOH . E 5 HOH A 56 1156 58 HOH HOH . E 5 HOH A 57 1157 59 HOH HOH . E 5 HOH A 58 1158 60 HOH HOH . E 5 HOH A 59 1159 62 HOH HOH . E 5 HOH A 60 1160 64 HOH HOH . E 5 HOH A 61 1161 65 HOH HOH . E 5 HOH A 62 1162 66 HOH HOH . E 5 HOH A 63 1163 67 HOH HOH . E 5 HOH A 64 1164 68 HOH HOH . E 5 HOH A 65 1165 69 HOH HOH . E 5 HOH A 66 1166 70 HOH HOH . E 5 HOH A 67 1167 71 HOH HOH . E 5 HOH A 68 1168 72 HOH HOH . E 5 HOH A 69 1169 73 HOH HOH . E 5 HOH A 70 1170 74 HOH HOH . E 5 HOH A 71 1171 75 HOH HOH . E 5 HOH A 72 1172 76 HOH HOH . E 5 HOH A 73 1173 77 HOH HOH . E 5 HOH A 74 1174 78 HOH HOH . E 5 HOH A 75 1175 79 HOH HOH . E 5 HOH A 76 1176 80 HOH HOH . E 5 HOH A 77 1177 81 HOH HOH . E 5 HOH A 78 1178 82 HOH HOH . E 5 HOH A 79 1179 83 HOH HOH . E 5 HOH A 80 1180 84 HOH HOH . E 5 HOH A 81 1181 85 HOH HOH . E 5 HOH A 82 1182 86 HOH HOH . E 5 HOH A 83 1183 87 HOH HOH . E 5 HOH A 84 1184 88 HOH HOH . E 5 HOH A 85 1185 89 HOH HOH . E 5 HOH A 86 1186 90 HOH HOH . E 5 HOH A 87 1187 91 HOH HOH . E 5 HOH A 88 1188 92 HOH HOH . E 5 HOH A 89 1189 93 HOH HOH . E 5 HOH A 90 1190 94 HOH HOH . E 5 HOH A 91 1191 95 HOH HOH . E 5 HOH A 92 1192 96 HOH HOH . E 5 HOH A 93 1193 97 HOH HOH . E 5 HOH A 94 1194 98 HOH HOH . E 5 HOH A 95 1195 99 HOH HOH . E 5 HOH A 96 1196 100 HOH HOH . E 5 HOH A 97 1197 101 HOH HOH . E 5 HOH A 98 1198 102 HOH HOH . E 5 HOH A 99 1199 103 HOH HOH . E 5 HOH A 100 1200 104 HOH HOH . E 5 HOH A 101 1201 106 HOH HOH . E 5 HOH A 102 1202 107 HOH HOH . E 5 HOH A 103 1203 108 HOH HOH . E 5 HOH A 104 1204 110 HOH HOH . E 5 HOH A 105 1205 111 HOH HOH . E 5 HOH A 106 1206 113 HOH HOH . E 5 HOH A 107 1207 115 HOH HOH . E 5 HOH A 108 1208 116 HOH HOH . E 5 HOH A 109 1209 117 HOH HOH . E 5 HOH A 110 1210 118 HOH HOH . E 5 HOH A 111 1211 120 HOH HOH . E 5 HOH A 112 1212 121 HOH HOH . E 5 HOH A 113 1213 122 HOH HOH . E 5 HOH A 114 1214 123 HOH HOH . E 5 HOH A 115 1215 124 HOH HOH . E 5 HOH A 116 1216 125 HOH HOH . E 5 HOH A 117 1217 126 HOH HOH . E 5 HOH A 118 1218 128 HOH HOH . E 5 HOH A 119 1219 130 HOH HOH . E 5 HOH A 120 1220 131 HOH HOH . E 5 HOH A 121 1221 132 HOH HOH . E 5 HOH A 122 1222 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DHT . . . D 4 27.002 5.408 4.235 1 26.09 ? C1 DHT 1002 A 1 HETATM 2 C C2 DHT . . . D 4 26.23 6.692 4.546 1 26.93 ? C2 DHT 1002 A 1 HETATM 3 C C3 DHT . . . D 4 24.81 6.522 4.066 1 27.11 ? C3 DHT 1002 A 1 HETATM 4 O O3 DHT . . . D 4 24.268 7.433 3.463 1 31.45 ? O3 DHT 1002 A 1 HETATM 5 C C4 DHT . . . D 4 24.217 5.143 4.279 1 27.08 ? C4 DHT 1002 A 1 HETATM 6 C C5 DHT . . . D 4 25.11 3.986 3.916 1 25.31 ? C5 DHT 1002 A 1 HETATM 7 C C6 DHT . . . D 4 24.378 2.657 4.176 1 28.18 ? C6 DHT 1002 A 1 HETATM 8 C C7 DHT . . . D 4 25.22 1.482 3.704 1 28.4 ? C7 DHT 1002 A 1 HETATM 9 C C8 DHT . . . D 4 26.605 1.47 4.36 1 28.64 ? C8 DHT 1002 A 1 HETATM 10 C C9 DHT . . . D 4 27.253 2.854 4.203 1 27.28 ? C9 DHT 1002 A 1 HETATM 11 C C10 DHT . . . D 4 26.458 4.034 4.693 1 27.19 ? C10 DHT 1002 A 1 HETATM 12 C C11 DHT . . . D 4 28.703 2.901 4.795 1 25.36 ? C11 DHT 1002 A 1 HETATM 13 C C12 DHT . . . D 4 29.506 1.697 4.259 1 25.03 ? C12 DHT 1002 A 1 HETATM 14 C C13 DHT . . . D 4 28.828 0.342 4.41 1 26.65 ? C13 DHT 1002 A 1 HETATM 15 C C14 DHT . . . D 4 27.467 0.422 3.703 1 27.59 ? C14 DHT 1002 A 1 HETATM 16 C C15 DHT . . . D 4 27.029 -1.047 3.639 1 30.33 ? C15 DHT 1002 A 1 HETATM 17 C C16 DHT . . . D 4 28.359 -1.823 3.402 1 29.62 ? C16 DHT 1002 A 1 HETATM 18 C C17 DHT . . . D 4 29.454 -0.742 3.515 1 31.15 ? C17 DHT 1002 A 1 HETATM 19 O O17 DHT . . . D 4 30.635 -1.386 3.982 1 31.18 ? O17 DHT 1002 A 1 HETATM 20 C C18 DHT . . . D 4 28.721 -0.043 5.868 1 25.37 ? C18 DHT 1002 A 1 HETATM 21 C C19 DHT . . . D 4 26.284 4.004 6.227 1 30.21 ? C19 DHT 1002 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #