data_4OFL # _model_server_result.job_id gFrrhe5NVjoTFzWAAVX7ng _model_server_result.datetime_utc '2024-11-13 07:57:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ofl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":503}' # _entry.id 4OFL # _exptl.entry_id 4OFL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.162 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HISTIDINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.72 _cell.angle_gamma 90 _cell.entry_id 4OFL _cell.length_a 47.04 _cell.length_b 213.83 _cell.length_c 52.87 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OFL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 471 A CYS 471 1_555 A SG CYS 498 A CYS 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 471 B CYS 471 1_555 B SG CYS 498 B CYS 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A NE2 HIS 482 A HIS 482 1_555 C NI NI . A NI 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc2 C NI NI . A NI 501 1_555 D N HIS . A HIS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc3 C NI NI . A NI 501 1_555 D ND1 HIS . A HIS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc4 C NI NI . A NI 501 1_555 D OXT HIS . A HIS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc5 C NI NI . A NI 501 1_555 E O HIS . A HIS 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? metalc ? metalc6 C NI NI . A NI 501 1_555 E ND1 HIS . A HIS 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? metalc ? metalc7 B NE2 HIS 482 B HIS 482 1_555 F NI NI . B NI 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc8 F NI NI . B NI 501 1_555 G N HIS . B HIS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.899 ? metalc ? metalc9 F NI NI . B NI 501 1_555 G OXT HIS . B HIS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc10 F NI NI . B NI 501 1_555 G ND1 HIS . B HIS 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc11 F NI NI . B NI 501 1_555 H ND1 HIS . B HIS 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc12 F NI NI . B NI 501 1_555 H O HIS . B HIS 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? # _chem_comp.formula 'C6 H10 N3 O2 1' _chem_comp.formula_weight 156.162 _chem_comp.id HIS _chem_comp.mon_nstd_flag y _chem_comp.name HISTIDINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HIS sing 129 n n N H HIS sing 130 n n N H2 HIS sing 131 n n CA C HIS sing 132 n n CA CB HIS sing 133 n n CA HA HIS sing 134 n n C O HIS doub 135 n n C OXT HIS sing 136 n n CB CG HIS sing 137 n n CB HB2 HIS sing 138 n n CB HB3 HIS sing 139 n n CG ND1 HIS sing 140 n y CG CD2 HIS doub 141 n y ND1 CE1 HIS doub 142 n y ND1 HD1 HIS sing 143 n n CD2 NE2 HIS sing 144 n y CD2 HD2 HIS sing 145 n n CE1 NE2 HIS sing 146 n y CE1 HE1 HIS sing 147 n n NE2 HE2 HIS sing 148 n n OXT HXT HIS sing 149 n n # _atom_sites.entry_id 4OFL _atom_sites.fract_transf_matrix[1][1] 0.021259 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004799 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004677 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI A 1 501 501 NI NI . D 3 HIS A 1 502 502 HIS HIS . E 3 HIS A 1 503 503 HIS HIS . F 2 NI B 1 501 501 NI NI . G 3 HIS B 1 502 502 HIS HIS . H 3 HIS B 1 503 503 HIS HIS . I 4 HOH A 1 601 601 HOH HOH . I 4 HOH A 2 602 602 HOH HOH . I 4 HOH A 3 603 603 HOH HOH . I 4 HOH A 4 604 604 HOH HOH . I 4 HOH A 5 605 606 HOH HOH . I 4 HOH A 6 606 607 HOH HOH . I 4 HOH A 7 607 608 HOH HOH . I 4 HOH A 8 608 609 HOH HOH . I 4 HOH A 9 609 610 HOH HOH . I 4 HOH A 10 610 611 HOH HOH . I 4 HOH A 11 611 612 HOH HOH . I 4 HOH A 12 612 613 HOH HOH . I 4 HOH A 13 613 614 HOH HOH . I 4 HOH A 14 614 615 HOH HOH . I 4 HOH A 15 615 616 HOH HOH . I 4 HOH A 16 616 617 HOH HOH . I 4 HOH A 17 617 618 HOH HOH . I 4 HOH A 18 618 619 HOH HOH . I 4 HOH A 19 619 620 HOH HOH . I 4 HOH A 20 620 621 HOH HOH . I 4 HOH A 21 621 622 HOH HOH . I 4 HOH A 22 622 623 HOH HOH . I 4 HOH A 23 623 624 HOH HOH . I 4 HOH A 24 624 625 HOH HOH . I 4 HOH A 25 625 626 HOH HOH . I 4 HOH A 26 626 627 HOH HOH . I 4 HOH A 27 627 629 HOH HOH . I 4 HOH A 28 628 630 HOH HOH . I 4 HOH A 29 629 632 HOH HOH . I 4 HOH A 30 630 633 HOH HOH . I 4 HOH A 31 631 634 HOH HOH . I 4 HOH A 32 632 635 HOH HOH . I 4 HOH A 33 633 636 HOH HOH . I 4 HOH A 34 634 637 HOH HOH . I 4 HOH A 35 635 638 HOH HOH . I 4 HOH A 36 636 639 HOH HOH . I 4 HOH A 37 637 640 HOH HOH . I 4 HOH A 38 638 641 HOH HOH . I 4 HOH A 39 639 642 HOH HOH . I 4 HOH A 40 640 643 HOH HOH . I 4 HOH A 41 641 644 HOH HOH . I 4 HOH A 42 642 645 HOH HOH . I 4 HOH A 43 643 646 HOH HOH . I 4 HOH A 44 644 647 HOH HOH . I 4 HOH A 45 645 648 HOH HOH . I 4 HOH A 46 646 649 HOH HOH . I 4 HOH A 47 647 650 HOH HOH . I 4 HOH A 48 648 651 HOH HOH . I 4 HOH A 49 649 652 HOH HOH . I 4 HOH A 50 650 653 HOH HOH . I 4 HOH A 51 651 654 HOH HOH . I 4 HOH A 52 652 655 HOH HOH . I 4 HOH A 53 653 656 HOH HOH . I 4 HOH A 54 654 657 HOH HOH . I 4 HOH A 55 655 658 HOH HOH . I 4 HOH A 56 656 660 HOH HOH . I 4 HOH A 57 657 661 HOH HOH . I 4 HOH A 58 658 662 HOH HOH . I 4 HOH A 59 659 663 HOH HOH . I 4 HOH A 60 660 664 HOH HOH . I 4 HOH A 61 661 665 HOH HOH . I 4 HOH A 62 662 666 HOH HOH . I 4 HOH A 63 663 667 HOH HOH . I 4 HOH A 64 664 668 HOH HOH . I 4 HOH A 65 665 669 HOH HOH . I 4 HOH A 66 666 670 HOH HOH . I 4 HOH A 67 667 671 HOH HOH . J 4 HOH B 1 601 605 HOH HOH . J 4 HOH B 2 602 601 HOH HOH . J 4 HOH B 3 603 602 HOH HOH . J 4 HOH B 4 604 603 HOH HOH . J 4 HOH B 5 605 604 HOH HOH . J 4 HOH B 6 606 605 HOH HOH . J 4 HOH B 7 607 606 HOH HOH . J 4 HOH B 8 608 607 HOH HOH . J 4 HOH B 9 609 608 HOH HOH . J 4 HOH B 10 610 609 HOH HOH . J 4 HOH B 11 611 610 HOH HOH . J 4 HOH B 12 612 611 HOH HOH . J 4 HOH B 13 613 612 HOH HOH . J 4 HOH B 14 614 613 HOH HOH . J 4 HOH B 15 615 614 HOH HOH . J 4 HOH B 16 616 615 HOH HOH . J 4 HOH B 17 617 616 HOH HOH . J 4 HOH B 18 618 617 HOH HOH . J 4 HOH B 19 619 618 HOH HOH . J 4 HOH B 20 620 619 HOH HOH . J 4 HOH B 21 621 620 HOH HOH . J 4 HOH B 22 622 621 HOH HOH . J 4 HOH B 23 623 622 HOH HOH . J 4 HOH B 24 624 623 HOH HOH . J 4 HOH B 25 625 624 HOH HOH . J 4 HOH B 26 626 625 HOH HOH . J 4 HOH B 27 627 626 HOH HOH . J 4 HOH B 28 628 627 HOH HOH . J 4 HOH B 29 629 628 HOH HOH . J 4 HOH B 30 630 629 HOH HOH . J 4 HOH B 31 631 630 HOH HOH . J 4 HOH B 32 632 631 HOH HOH . J 4 HOH B 33 633 632 HOH HOH . J 4 HOH B 34 634 633 HOH HOH . J 4 HOH B 35 635 634 HOH HOH . J 4 HOH B 36 636 635 HOH HOH . J 4 HOH B 37 637 636 HOH HOH . J 4 HOH B 38 638 637 HOH HOH . J 4 HOH B 39 639 638 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HIS . . . H 3 10.777 69.296 28.617 0.9 78.62 ? N HIS 503 B 1 HETATM 2 C CA HIS . . . H 3 10.607 67.909 28.196 0.9 79.14 ? CA HIS 503 B 1 HETATM 3 C C HIS . . . H 3 9.779 67.829 26.917 0.9 75.15 ? C HIS 503 B 1 HETATM 4 O O HIS . . . H 3 9.763 66.81 26.228 0.9 73.82 ? O HIS 503 B 1 HETATM 5 C CB HIS . . . H 3 9.947 67.098 29.312 0.9 81.7 ? CB HIS 503 B 1 HETATM 6 C CG HIS . . . H 3 10.204 65.625 29.237 0.9 85.14 ? CG HIS 503 B 1 HETATM 7 N ND1 HIS . . . H 3 9.84 64.858 28.153 0.9 87.65 ? ND1 HIS 503 B 1 HETATM 8 C CD2 HIS . . . H 3 10.776 64.778 30.124 0.9 87.33 ? CD2 HIS 503 B 1 HETATM 9 C CE1 HIS . . . H 3 10.183 63.602 28.37 0.9 89.33 ? CE1 HIS 503 B 1 HETATM 10 N NE2 HIS . . . H 3 10.754 63.524 29.56 0.9 88.83 ? NE2 HIS 503 B 1 HETATM 11 O OXT HIS . . . H 3 9.118 68.793 26.53 0.9 73.38 ? OXT HIS 503 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 11 #