data_4OFX # _model_server_result.job_id tYG8FtbQ5OuyQOY7Pf0p4A _model_server_result.datetime_utc '2024-11-10 01:25:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ofx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4OFX # _exptl.entry_id 4OFX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OFX _cell.length_a 67.171 _cell.length_b 99.739 _cell.length_c 42.497 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OFX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 67.171 99.739 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O VAL 12 A VAL 9 1_555 B NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc2 A O GLY 14 A GLY 11 1_555 B NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc3 A OE1 GLU 140 A GLU 137 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc4 A OE2 GLU 140 A GLU 137 1_555 C NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc5 B NA NA . A NA 401 1_555 D O HOH . A HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc6 B NA NA . A NA 401 1_555 D O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc7 B NA NA . A NA 401 1_555 D O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc8 B NA NA . A NA 401 1_555 D O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc9 C NA NA . A NA 402 1_555 D O HOH . A HOH 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc10 C NA NA . A NA 402 1_555 D O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc11 C NA NA . A NA 402 1_555 D O HOH . A HOH 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc12 C NA NA . A NA 402 1_555 D O HOH . A HOH 720 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4OFX _atom_sites.fract_transf_matrix[1][1] 0.014887 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010026 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 401 1 NA NA . C 2 NA A 1 402 2 NA NA . D 3 HOH A 1 501 1 HOH HOH . D 3 HOH A 2 502 2 HOH HOH . D 3 HOH A 3 503 3 HOH HOH . D 3 HOH A 4 504 5 HOH HOH . D 3 HOH A 5 505 6 HOH HOH . D 3 HOH A 6 506 7 HOH HOH . D 3 HOH A 7 507 8 HOH HOH . D 3 HOH A 8 508 9 HOH HOH . D 3 HOH A 9 509 12 HOH HOH . D 3 HOH A 10 510 13 HOH HOH . D 3 HOH A 11 511 14 HOH HOH . D 3 HOH A 12 512 15 HOH HOH . D 3 HOH A 13 513 16 HOH HOH . D 3 HOH A 14 514 17 HOH HOH . D 3 HOH A 15 515 18 HOH HOH . D 3 HOH A 16 516 19 HOH HOH . D 3 HOH A 17 517 20 HOH HOH . D 3 HOH A 18 518 21 HOH HOH . D 3 HOH A 19 519 22 HOH HOH . D 3 HOH A 20 520 24 HOH HOH . D 3 HOH A 21 521 25 HOH HOH . D 3 HOH A 22 522 26 HOH HOH . D 3 HOH A 23 523 27 HOH HOH . D 3 HOH A 24 524 28 HOH HOH . D 3 HOH A 25 525 29 HOH HOH . D 3 HOH A 26 526 30 HOH HOH . D 3 HOH A 27 527 31 HOH HOH . D 3 HOH A 28 528 32 HOH HOH . D 3 HOH A 29 529 33 HOH HOH . D 3 HOH A 30 530 34 HOH HOH . D 3 HOH A 31 531 35 HOH HOH . D 3 HOH A 32 532 36 HOH HOH . D 3 HOH A 33 533 37 HOH HOH . D 3 HOH A 34 534 38 HOH HOH . D 3 HOH A 35 535 39 HOH HOH . D 3 HOH A 36 536 40 HOH HOH . D 3 HOH A 37 537 41 HOH HOH . D 3 HOH A 38 538 42 HOH HOH . D 3 HOH A 39 539 45 HOH HOH . D 3 HOH A 40 540 47 HOH HOH . D 3 HOH A 41 541 48 HOH HOH . D 3 HOH A 42 542 49 HOH HOH . D 3 HOH A 43 543 50 HOH HOH . D 3 HOH A 44 544 51 HOH HOH . D 3 HOH A 45 545 52 HOH HOH . D 3 HOH A 46 546 53 HOH HOH . D 3 HOH A 47 547 54 HOH HOH . D 3 HOH A 48 548 56 HOH HOH . D 3 HOH A 49 549 57 HOH HOH . D 3 HOH A 50 550 58 HOH HOH . D 3 HOH A 51 551 59 HOH HOH . D 3 HOH A 52 552 60 HOH HOH . D 3 HOH A 53 553 61 HOH HOH . D 3 HOH A 54 554 62 HOH HOH . D 3 HOH A 55 555 63 HOH HOH . D 3 HOH A 56 556 65 HOH HOH . D 3 HOH A 57 557 66 HOH HOH . D 3 HOH A 58 558 67 HOH HOH . D 3 HOH A 59 559 68 HOH HOH . D 3 HOH A 60 560 69 HOH HOH . D 3 HOH A 61 561 70 HOH HOH . D 3 HOH A 62 562 71 HOH HOH . D 3 HOH A 63 563 72 HOH HOH . D 3 HOH A 64 564 73 HOH HOH . D 3 HOH A 65 565 74 HOH HOH . D 3 HOH A 66 566 75 HOH HOH . D 3 HOH A 67 567 76 HOH HOH . D 3 HOH A 68 568 77 HOH HOH . D 3 HOH A 69 569 78 HOH HOH . D 3 HOH A 70 570 79 HOH HOH . D 3 HOH A 71 571 80 HOH HOH . D 3 HOH A 72 572 81 HOH HOH . D 3 HOH A 73 573 85 HOH HOH . D 3 HOH A 74 574 86 HOH HOH . D 3 HOH A 75 575 87 HOH HOH . D 3 HOH A 76 576 89 HOH HOH . D 3 HOH A 77 577 91 HOH HOH . D 3 HOH A 78 578 92 HOH HOH . D 3 HOH A 79 579 94 HOH HOH . D 3 HOH A 80 580 95 HOH HOH . D 3 HOH A 81 581 96 HOH HOH . D 3 HOH A 82 582 97 HOH HOH . D 3 HOH A 83 583 99 HOH HOH . D 3 HOH A 84 584 100 HOH HOH . D 3 HOH A 85 585 101 HOH HOH . D 3 HOH A 86 586 102 HOH HOH . D 3 HOH A 87 587 103 HOH HOH . D 3 HOH A 88 588 104 HOH HOH . D 3 HOH A 89 589 105 HOH HOH . D 3 HOH A 90 590 107 HOH HOH . D 3 HOH A 91 591 110 HOH HOH . D 3 HOH A 92 592 112 HOH HOH . D 3 HOH A 93 593 113 HOH HOH . D 3 HOH A 94 594 114 HOH HOH . D 3 HOH A 95 595 118 HOH HOH . D 3 HOH A 96 596 120 HOH HOH . D 3 HOH A 97 597 122 HOH HOH . D 3 HOH A 98 598 123 HOH HOH . D 3 HOH A 99 599 124 HOH HOH . D 3 HOH A 100 600 125 HOH HOH . D 3 HOH A 101 601 126 HOH HOH . D 3 HOH A 102 602 127 HOH HOH . D 3 HOH A 103 603 129 HOH HOH . D 3 HOH A 104 604 130 HOH HOH . D 3 HOH A 105 605 131 HOH HOH . D 3 HOH A 106 606 134 HOH HOH . D 3 HOH A 107 607 135 HOH HOH . D 3 HOH A 108 608 136 HOH HOH . D 3 HOH A 109 609 140 HOH HOH . D 3 HOH A 110 610 141 HOH HOH . D 3 HOH A 111 611 142 HOH HOH . D 3 HOH A 112 612 143 HOH HOH . D 3 HOH A 113 613 144 HOH HOH . D 3 HOH A 114 614 145 HOH HOH . D 3 HOH A 115 615 146 HOH HOH . D 3 HOH A 116 616 147 HOH HOH . D 3 HOH A 117 617 149 HOH HOH . D 3 HOH A 118 618 151 HOH HOH . D 3 HOH A 119 619 152 HOH HOH . D 3 HOH A 120 620 154 HOH HOH . D 3 HOH A 121 621 157 HOH HOH . D 3 HOH A 122 622 158 HOH HOH . D 3 HOH A 123 623 160 HOH HOH . D 3 HOH A 124 624 161 HOH HOH . D 3 HOH A 125 625 162 HOH HOH . D 3 HOH A 126 626 163 HOH HOH . D 3 HOH A 127 627 166 HOH HOH . D 3 HOH A 128 628 167 HOH HOH . D 3 HOH A 129 629 168 HOH HOH . D 3 HOH A 130 630 178 HOH HOH . D 3 HOH A 131 631 180 HOH HOH . D 3 HOH A 132 632 182 HOH HOH . D 3 HOH A 133 633 183 HOH HOH . D 3 HOH A 134 634 184 HOH HOH . D 3 HOH A 135 635 190 HOH HOH . D 3 HOH A 136 636 194 HOH HOH . D 3 HOH A 137 637 200 HOH HOH . D 3 HOH A 138 638 202 HOH HOH . D 3 HOH A 139 639 203 HOH HOH . D 3 HOH A 140 640 206 HOH HOH . D 3 HOH A 141 641 207 HOH HOH . D 3 HOH A 142 642 208 HOH HOH . D 3 HOH A 143 643 218 HOH HOH . D 3 HOH A 144 644 219 HOH HOH . D 3 HOH A 145 645 223 HOH HOH . D 3 HOH A 146 646 226 HOH HOH . D 3 HOH A 147 647 228 HOH HOH . D 3 HOH A 148 648 230 HOH HOH . D 3 HOH A 149 649 301 HOH HOH . D 3 HOH A 150 650 302 HOH HOH . D 3 HOH A 151 651 303 HOH HOH . D 3 HOH A 152 652 304 HOH HOH . D 3 HOH A 153 653 305 HOH HOH . D 3 HOH A 154 654 306 HOH HOH . D 3 HOH A 155 655 307 HOH HOH . D 3 HOH A 156 656 308 HOH HOH . D 3 HOH A 157 657 309 HOH HOH . D 3 HOH A 158 658 310 HOH HOH . D 3 HOH A 159 659 312 HOH HOH . D 3 HOH A 160 660 313 HOH HOH . D 3 HOH A 161 661 314 HOH HOH . D 3 HOH A 162 662 315 HOH HOH . D 3 HOH A 163 663 317 HOH HOH . D 3 HOH A 164 664 318 HOH HOH . D 3 HOH A 165 665 319 HOH HOH . D 3 HOH A 166 666 320 HOH HOH . D 3 HOH A 167 667 321 HOH HOH . D 3 HOH A 168 668 322 HOH HOH . D 3 HOH A 169 669 323 HOH HOH . D 3 HOH A 170 670 324 HOH HOH . D 3 HOH A 171 671 325 HOH HOH . D 3 HOH A 172 672 326 HOH HOH . D 3 HOH A 173 673 327 HOH HOH . D 3 HOH A 174 674 328 HOH HOH . D 3 HOH A 175 675 333 HOH HOH . D 3 HOH A 176 676 334 HOH HOH . D 3 HOH A 177 677 335 HOH HOH . D 3 HOH A 178 678 336 HOH HOH . D 3 HOH A 179 679 337 HOH HOH . D 3 HOH A 180 680 338 HOH HOH . D 3 HOH A 181 681 339 HOH HOH . D 3 HOH A 182 682 340 HOH HOH . D 3 HOH A 183 683 341 HOH HOH . D 3 HOH A 184 684 342 HOH HOH . D 3 HOH A 185 685 343 HOH HOH . D 3 HOH A 186 686 344 HOH HOH . D 3 HOH A 187 687 345 HOH HOH . D 3 HOH A 188 688 346 HOH HOH . D 3 HOH A 189 689 348 HOH HOH . D 3 HOH A 190 690 351 HOH HOH . D 3 HOH A 191 691 352 HOH HOH . D 3 HOH A 192 692 353 HOH HOH . D 3 HOH A 193 693 354 HOH HOH . D 3 HOH A 194 694 355 HOH HOH . D 3 HOH A 195 695 357 HOH HOH . D 3 HOH A 196 696 361 HOH HOH . D 3 HOH A 197 697 363 HOH HOH . D 3 HOH A 198 698 364 HOH HOH . D 3 HOH A 199 699 365 HOH HOH . D 3 HOH A 200 700 368 HOH HOH . D 3 HOH A 201 701 369 HOH HOH . D 3 HOH A 202 702 370 HOH HOH . D 3 HOH A 203 703 371 HOH HOH . D 3 HOH A 204 704 372 HOH HOH . D 3 HOH A 205 705 373 HOH HOH . D 3 HOH A 206 706 374 HOH HOH . D 3 HOH A 207 707 377 HOH HOH . D 3 HOH A 208 708 379 HOH HOH . D 3 HOH A 209 709 380 HOH HOH . D 3 HOH A 210 710 381 HOH HOH . D 3 HOH A 211 711 386 HOH HOH . D 3 HOH A 212 712 388 HOH HOH . D 3 HOH A 213 713 390 HOH HOH . D 3 HOH A 214 714 392 HOH HOH . D 3 HOH A 215 715 393 HOH HOH . D 3 HOH A 216 716 394 HOH HOH . D 3 HOH A 217 717 395 HOH HOH . D 3 HOH A 218 718 396 HOH HOH . D 3 HOH A 219 719 397 HOH HOH . D 3 HOH A 220 720 399 HOH HOH . D 3 HOH A 221 721 400 HOH HOH . D 3 HOH A 222 722 401 HOH HOH . D 3 HOH A 223 723 1 HOH HOH . D 3 HOH A 224 724 2 HOH HOH . D 3 HOH A 225 725 3 HOH HOH . D 3 HOH A 226 726 4 HOH HOH . D 3 HOH A 227 727 5 HOH HOH . D 3 HOH A 228 728 7 HOH HOH . D 3 HOH A 229 729 8 HOH HOH . D 3 HOH A 230 730 9 HOH HOH . D 3 HOH A 231 731 10 HOH HOH . D 3 HOH A 232 732 11 HOH HOH . D 3 HOH A 233 733 12 HOH HOH . D 3 HOH A 234 734 13 HOH HOH . D 3 HOH A 235 735 15 HOH HOH . D 3 HOH A 236 736 16 HOH HOH . D 3 HOH A 237 737 17 HOH HOH . D 3 HOH A 238 738 18 HOH HOH . D 3 HOH A 239 739 19 HOH HOH . D 3 HOH A 240 740 21 HOH HOH . D 3 HOH A 241 741 22 HOH HOH . D 3 HOH A 242 742 23 HOH HOH . D 3 HOH A 243 743 26 HOH HOH . D 3 HOH A 244 744 27 HOH HOH . D 3 HOH A 245 745 28 HOH HOH . D 3 HOH A 246 746 29 HOH HOH . D 3 HOH A 247 747 30 HOH HOH . D 3 HOH A 248 748 33 HOH HOH . D 3 HOH A 249 749 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 34.574 _atom_site.Cartn_y 45.905 _atom_site.Cartn_z 28.32 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.45 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #