data_4OGJ
#
_model_server_result.job_id            kQKO5BmPGii1oOWpyOhxEg 
_model_server_result.datetime_utc      '2024-11-24 14:48:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ogj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    4OGJ 
#
_exptl.entry_id    4OGJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4OGJ 
_cell.length_a            42.163 
_cell.length_b            59.412 
_cell.length_c            111.67 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4OGJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,H 1 1 
B,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 F N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 159 n n 
C1 C2 EDO sing 160 n n 
C1 H11 EDO sing 161 n n 
C1 H12 EDO sing 162 n n 
O1 HO1 EDO sing 163 n n 
C2 O2 EDO sing 164 n n 
C2 H21 EDO sing 165 n n 
C2 H22 EDO sing 166 n n 
O2 HO2 EDO sing 167 n n 
#
_atom_sites.entry_id                     4OGJ 
_atom_sites.fract_transf_matrix[1][1]    0.023717 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016832 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008955 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 201 1 EDO EDO . 
D 2 EDO A 1 202 3 EDO EDO . 
E 3 2TA A 1 203 1 2TA DRG . 
F 2 EDO B 1 201 2 EDO EDO . 
G 3 2TA B 1 202 2 2TA DRG . 
H 4 HOH A 1 301 1 HOH HOH . 
H 4 HOH A 2 302 2 HOH HOH . 
H 4 HOH A 3 303 3 HOH HOH . 
H 4 HOH A 4 304 4 HOH HOH . 
H 4 HOH A 5 305 5 HOH HOH . 
H 4 HOH A 6 306 6 HOH HOH . 
H 4 HOH A 7 307 7 HOH HOH . 
H 4 HOH A 8 308 8 HOH HOH . 
H 4 HOH A 9 309 9 HOH HOH . 
H 4 HOH A 10 310 10 HOH HOH . 
H 4 HOH A 11 311 11 HOH HOH . 
H 4 HOH A 12 312 12 HOH HOH . 
H 4 HOH A 13 313 13 HOH HOH . 
H 4 HOH A 14 314 14 HOH HOH . 
H 4 HOH A 15 315 15 HOH HOH . 
H 4 HOH A 16 316 16 HOH HOH . 
H 4 HOH A 17 317 17 HOH HOH . 
H 4 HOH A 18 318 18 HOH HOH . 
H 4 HOH A 19 319 19 HOH HOH . 
H 4 HOH A 20 320 20 HOH HOH . 
H 4 HOH A 21 321 21 HOH HOH . 
H 4 HOH A 22 322 22 HOH HOH . 
H 4 HOH A 23 323 23 HOH HOH . 
H 4 HOH A 24 324 24 HOH HOH . 
H 4 HOH A 25 325 26 HOH HOH . 
H 4 HOH A 26 326 27 HOH HOH . 
H 4 HOH A 27 327 28 HOH HOH . 
H 4 HOH A 28 328 29 HOH HOH . 
H 4 HOH A 29 329 30 HOH HOH . 
H 4 HOH A 30 330 31 HOH HOH . 
H 4 HOH A 31 331 32 HOH HOH . 
H 4 HOH A 32 332 33 HOH HOH . 
H 4 HOH A 33 333 34 HOH HOH . 
H 4 HOH A 34 334 35 HOH HOH . 
H 4 HOH A 35 335 36 HOH HOH . 
H 4 HOH A 36 336 37 HOH HOH . 
H 4 HOH A 37 337 38 HOH HOH . 
H 4 HOH A 38 338 39 HOH HOH . 
H 4 HOH A 39 339 40 HOH HOH . 
H 4 HOH A 40 340 41 HOH HOH . 
H 4 HOH A 41 341 42 HOH HOH . 
H 4 HOH A 42 342 43 HOH HOH . 
H 4 HOH A 43 343 44 HOH HOH . 
H 4 HOH A 44 344 45 HOH HOH . 
H 4 HOH A 45 345 46 HOH HOH . 
H 4 HOH A 46 346 47 HOH HOH . 
H 4 HOH A 47 347 48 HOH HOH . 
H 4 HOH A 48 348 49 HOH HOH . 
H 4 HOH A 49 349 50 HOH HOH . 
H 4 HOH A 50 350 51 HOH HOH . 
H 4 HOH A 51 351 52 HOH HOH . 
H 4 HOH A 52 352 53 HOH HOH . 
H 4 HOH A 53 353 54 HOH HOH . 
H 4 HOH A 54 354 55 HOH HOH . 
H 4 HOH A 55 355 56 HOH HOH . 
H 4 HOH A 56 356 57 HOH HOH . 
H 4 HOH A 57 357 58 HOH HOH . 
H 4 HOH A 58 358 59 HOH HOH . 
H 4 HOH A 59 359 60 HOH HOH . 
H 4 HOH A 60 360 61 HOH HOH . 
H 4 HOH A 61 361 62 HOH HOH . 
H 4 HOH A 62 362 63 HOH HOH . 
H 4 HOH A 63 363 64 HOH HOH . 
H 4 HOH A 64 364 65 HOH HOH . 
H 4 HOH A 65 365 66 HOH HOH . 
H 4 HOH A 66 366 67 HOH HOH . 
H 4 HOH A 67 367 68 HOH HOH . 
H 4 HOH A 68 368 69 HOH HOH . 
H 4 HOH A 69 369 70 HOH HOH . 
H 4 HOH A 70 370 71 HOH HOH . 
H 4 HOH A 71 371 72 HOH HOH . 
H 4 HOH A 72 372 73 HOH HOH . 
H 4 HOH A 73 373 124 HOH HOH . 
H 4 HOH A 74 374 154 HOH HOH . 
H 4 HOH A 75 375 155 HOH HOH . 
H 4 HOH A 76 376 156 HOH HOH . 
H 4 HOH A 77 377 157 HOH HOH . 
H 4 HOH A 78 378 158 HOH HOH . 
H 4 HOH A 79 379 159 HOH HOH . 
H 4 HOH A 80 380 160 HOH HOH . 
H 4 HOH A 81 381 161 HOH HOH . 
H 4 HOH A 82 382 162 HOH HOH . 
H 4 HOH A 83 383 163 HOH HOH . 
H 4 HOH A 84 384 164 HOH HOH . 
H 4 HOH A 85 385 165 HOH HOH . 
H 4 HOH A 86 386 166 HOH HOH . 
H 4 HOH A 87 387 169 HOH HOH . 
H 4 HOH A 88 388 170 HOH HOH . 
H 4 HOH A 89 389 171 HOH HOH . 
H 4 HOH A 90 390 172 HOH HOH . 
H 4 HOH A 91 391 173 HOH HOH . 
H 4 HOH A 92 392 174 HOH HOH . 
H 4 HOH A 93 393 175 HOH HOH . 
H 4 HOH A 94 394 178 HOH HOH . 
H 4 HOH A 95 395 179 HOH HOH . 
H 4 HOH A 96 396 180 HOH HOH . 
H 4 HOH A 97 397 181 HOH HOH . 
H 4 HOH A 98 398 182 HOH HOH . 
H 4 HOH A 99 399 183 HOH HOH . 
H 4 HOH A 100 400 184 HOH HOH . 
H 4 HOH A 101 401 185 HOH HOH . 
H 4 HOH A 102 402 186 HOH HOH . 
H 4 HOH A 103 403 187 HOH HOH . 
H 4 HOH A 104 404 188 HOH HOH . 
H 4 HOH A 105 405 189 HOH HOH . 
H 4 HOH A 106 406 221 HOH HOH . 
H 4 HOH A 107 407 222 HOH HOH . 
H 4 HOH A 108 408 223 HOH HOH . 
H 4 HOH A 109 409 224 HOH HOH . 
H 4 HOH A 110 410 225 HOH HOH . 
H 4 HOH A 111 411 226 HOH HOH . 
H 4 HOH A 112 412 227 HOH HOH . 
H 4 HOH A 113 413 228 HOH HOH . 
H 4 HOH A 114 414 229 HOH HOH . 
H 4 HOH A 115 415 230 HOH HOH . 
H 4 HOH A 116 416 231 HOH HOH . 
H 4 HOH A 117 417 232 HOH HOH . 
H 4 HOH A 118 418 233 HOH HOH . 
H 4 HOH A 119 419 234 HOH HOH . 
H 4 HOH A 120 420 235 HOH HOH . 
H 4 HOH A 121 421 236 HOH HOH . 
H 4 HOH A 122 422 241 HOH HOH . 
H 4 HOH A 123 423 242 HOH HOH . 
H 4 HOH A 124 424 244 HOH HOH . 
H 4 HOH A 125 425 245 HOH HOH . 
H 4 HOH A 126 426 246 HOH HOH . 
H 4 HOH A 127 427 247 HOH HOH . 
H 4 HOH A 128 428 248 HOH HOH . 
H 4 HOH A 129 429 249 HOH HOH . 
H 4 HOH A 130 430 251 HOH HOH . 
H 4 HOH A 131 431 252 HOH HOH . 
H 4 HOH A 132 432 253 HOH HOH . 
H 4 HOH A 133 433 254 HOH HOH . 
H 4 HOH A 134 434 255 HOH HOH . 
H 4 HOH A 135 435 256 HOH HOH . 
H 4 HOH A 136 436 257 HOH HOH . 
H 4 HOH A 137 437 258 HOH HOH . 
H 4 HOH A 138 438 259 HOH HOH . 
H 4 HOH A 139 439 260 HOH HOH . 
H 4 HOH A 140 440 261 HOH HOH . 
H 4 HOH A 141 441 262 HOH HOH . 
H 4 HOH A 142 442 263 HOH HOH . 
H 4 HOH A 143 443 264 HOH HOH . 
H 4 HOH A 144 444 265 HOH HOH . 
H 4 HOH A 145 445 266 HOH HOH . 
H 4 HOH A 146 446 267 HOH HOH . 
H 4 HOH A 147 447 268 HOH HOH . 
H 4 HOH A 148 448 269 HOH HOH . 
H 4 HOH A 149 449 270 HOH HOH . 
H 4 HOH A 150 450 271 HOH HOH . 
H 4 HOH A 151 451 272 HOH HOH . 
H 4 HOH A 152 452 273 HOH HOH . 
H 4 HOH A 153 453 274 HOH HOH . 
H 4 HOH A 154 454 292 HOH HOH . 
H 4 HOH A 155 455 25 HOH HOH . 
I 4 HOH B 1 301 74 HOH HOH . 
I 4 HOH B 2 302 75 HOH HOH . 
I 4 HOH B 3 303 76 HOH HOH . 
I 4 HOH B 4 304 77 HOH HOH . 
I 4 HOH B 5 305 78 HOH HOH . 
I 4 HOH B 6 306 79 HOH HOH . 
I 4 HOH B 7 307 80 HOH HOH . 
I 4 HOH B 8 308 81 HOH HOH . 
I 4 HOH B 9 309 82 HOH HOH . 
I 4 HOH B 10 310 83 HOH HOH . 
I 4 HOH B 11 311 84 HOH HOH . 
I 4 HOH B 12 312 85 HOH HOH . 
I 4 HOH B 13 313 86 HOH HOH . 
I 4 HOH B 14 314 87 HOH HOH . 
I 4 HOH B 15 315 88 HOH HOH . 
I 4 HOH B 16 316 89 HOH HOH . 
I 4 HOH B 17 317 90 HOH HOH . 
I 4 HOH B 18 318 91 HOH HOH . 
I 4 HOH B 19 319 92 HOH HOH . 
I 4 HOH B 20 320 93 HOH HOH . 
I 4 HOH B 21 321 94 HOH HOH . 
I 4 HOH B 22 322 95 HOH HOH . 
I 4 HOH B 23 323 96 HOH HOH . 
I 4 HOH B 24 324 97 HOH HOH . 
I 4 HOH B 25 325 98 HOH HOH . 
I 4 HOH B 26 326 99 HOH HOH . 
I 4 HOH B 27 327 100 HOH HOH . 
I 4 HOH B 28 328 101 HOH HOH . 
I 4 HOH B 29 329 102 HOH HOH . 
I 4 HOH B 30 330 103 HOH HOH . 
I 4 HOH B 31 331 104 HOH HOH . 
I 4 HOH B 32 332 105 HOH HOH . 
I 4 HOH B 33 333 106 HOH HOH . 
I 4 HOH B 34 334 107 HOH HOH . 
I 4 HOH B 35 335 108 HOH HOH . 
I 4 HOH B 36 336 109 HOH HOH . 
I 4 HOH B 37 337 110 HOH HOH . 
I 4 HOH B 38 338 111 HOH HOH . 
I 4 HOH B 39 339 112 HOH HOH . 
I 4 HOH B 40 340 113 HOH HOH . 
I 4 HOH B 41 341 114 HOH HOH . 
I 4 HOH B 42 342 115 HOH HOH . 
I 4 HOH B 43 343 116 HOH HOH . 
I 4 HOH B 44 344 117 HOH HOH . 
I 4 HOH B 45 345 118 HOH HOH . 
I 4 HOH B 46 346 119 HOH HOH . 
I 4 HOH B 47 347 120 HOH HOH . 
I 4 HOH B 48 348 121 HOH HOH . 
I 4 HOH B 49 349 122 HOH HOH . 
I 4 HOH B 50 350 123 HOH HOH . 
I 4 HOH B 51 351 125 HOH HOH . 
I 4 HOH B 52 352 126 HOH HOH . 
I 4 HOH B 53 353 127 HOH HOH . 
I 4 HOH B 54 354 128 HOH HOH . 
I 4 HOH B 55 355 129 HOH HOH . 
I 4 HOH B 56 356 130 HOH HOH . 
I 4 HOH B 57 357 131 HOH HOH . 
I 4 HOH B 58 358 132 HOH HOH . 
I 4 HOH B 59 359 133 HOH HOH . 
I 4 HOH B 60 360 134 HOH HOH . 
I 4 HOH B 61 361 135 HOH HOH . 
I 4 HOH B 62 362 136 HOH HOH . 
I 4 HOH B 63 363 137 HOH HOH . 
I 4 HOH B 64 364 138 HOH HOH . 
I 4 HOH B 65 365 139 HOH HOH . 
I 4 HOH B 66 366 140 HOH HOH . 
I 4 HOH B 67 367 141 HOH HOH . 
I 4 HOH B 68 368 142 HOH HOH . 
I 4 HOH B 69 369 143 HOH HOH . 
I 4 HOH B 70 370 144 HOH HOH . 
I 4 HOH B 71 371 145 HOH HOH . 
I 4 HOH B 72 372 146 HOH HOH . 
I 4 HOH B 73 373 148 HOH HOH . 
I 4 HOH B 74 374 149 HOH HOH . 
I 4 HOH B 75 375 150 HOH HOH . 
I 4 HOH B 76 376 151 HOH HOH . 
I 4 HOH B 77 377 152 HOH HOH . 
I 4 HOH B 78 378 153 HOH HOH . 
I 4 HOH B 79 379 167 HOH HOH . 
I 4 HOH B 80 380 168 HOH HOH . 
I 4 HOH B 81 381 176 HOH HOH . 
I 4 HOH B 82 382 177 HOH HOH . 
I 4 HOH B 83 383 190 HOH HOH . 
I 4 HOH B 84 384 191 HOH HOH . 
I 4 HOH B 85 385 192 HOH HOH . 
I 4 HOH B 86 386 193 HOH HOH . 
I 4 HOH B 87 387 194 HOH HOH . 
I 4 HOH B 88 388 195 HOH HOH . 
I 4 HOH B 89 389 196 HOH HOH . 
I 4 HOH B 90 390 197 HOH HOH . 
I 4 HOH B 91 391 198 HOH HOH . 
I 4 HOH B 92 392 199 HOH HOH . 
I 4 HOH B 93 393 200 HOH HOH . 
I 4 HOH B 94 394 201 HOH HOH . 
I 4 HOH B 95 395 202 HOH HOH . 
I 4 HOH B 96 396 203 HOH HOH . 
I 4 HOH B 97 397 204 HOH HOH . 
I 4 HOH B 98 398 205 HOH HOH . 
I 4 HOH B 99 399 206 HOH HOH . 
I 4 HOH B 100 400 207 HOH HOH . 
I 4 HOH B 101 401 208 HOH HOH . 
I 4 HOH B 102 402 209 HOH HOH . 
I 4 HOH B 103 403 210 HOH HOH . 
I 4 HOH B 104 404 211 HOH HOH . 
I 4 HOH B 105 405 212 HOH HOH . 
I 4 HOH B 106 406 213 HOH HOH . 
I 4 HOH B 107 407 214 HOH HOH . 
I 4 HOH B 108 408 215 HOH HOH . 
I 4 HOH B 109 409 216 HOH HOH . 
I 4 HOH B 110 410 217 HOH HOH . 
I 4 HOH B 111 411 218 HOH HOH . 
I 4 HOH B 112 412 219 HOH HOH . 
I 4 HOH B 113 413 220 HOH HOH . 
I 4 HOH B 114 414 237 HOH HOH . 
I 4 HOH B 115 415 238 HOH HOH . 
I 4 HOH B 116 416 239 HOH HOH . 
I 4 HOH B 117 417 240 HOH HOH . 
I 4 HOH B 118 418 243 HOH HOH . 
I 4 HOH B 119 419 250 HOH HOH . 
I 4 HOH B 120 420 275 HOH HOH . 
I 4 HOH B 121 421 276 HOH HOH . 
I 4 HOH B 122 422 277 HOH HOH . 
I 4 HOH B 123 423 278 HOH HOH . 
I 4 HOH B 124 424 279 HOH HOH . 
I 4 HOH B 125 425 280 HOH HOH . 
I 4 HOH B 126 426 281 HOH HOH . 
I 4 HOH B 127 427 282 HOH HOH . 
I 4 HOH B 128 428 283 HOH HOH . 
I 4 HOH B 129 429 284 HOH HOH . 
I 4 HOH B 130 430 285 HOH HOH . 
I 4 HOH B 131 431 286 HOH HOH . 
I 4 HOH B 132 432 287 HOH HOH . 
I 4 HOH B 133 433 288 HOH HOH . 
I 4 HOH B 134 434 289 HOH HOH . 
I 4 HOH B 135 435 290 HOH HOH . 
I 4 HOH B 136 436 291 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 2 31.705 21.966 19.795 1 22.2 ? C1 EDO 202 A 1 
HETATM 2 O O1 EDO . . . D 2 32.928 21.651 20.407 1 29.38 ? O1 EDO 202 A 1 
HETATM 3 C C2 EDO . . . D 2 31.973 22.645 18.473 1 30.85 ? C2 EDO 202 A 1 
HETATM 4 O O2 EDO . . . D 2 32.416 21.656 17.528 1 32.23 ? O2 EDO 202 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           519 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           4 
#