data_4OHV
#
_model_server_result.job_id            CM2pX2fEuzu0xCJwirNkKA 
_model_server_result.datetime_utc      '2024-11-29 01:22:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ohv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    4OHV 
#
_exptl.entry_id    4OHV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4OHV 
_cell.length_a            100.72 
_cell.length_b            100.72 
_cell.length_c            40.38 
_cell.Z_PDB               3 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4OHV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        144 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PRO 86 A PRO 83 1_555 A N MSE 87 A MSE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C MSE 87 A MSE 84 1_555 A N VAL 88 A VAL 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 A C ALA 96 A ALA 93 1_555 A N MSE 97 A MSE 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 A C MSE 97 A MSE 94 1_555 A N GLU 98 A GLU 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale5 A C GLU 209 A GLU 206 1_555 A N MSE 210 A MSE 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale6 A C MSE 210 A MSE 207 1_555 A N ALA 211 A ALA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale7 A C GLY 228 A GLY 225 1_555 A N MSE 229 A MSE 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 A C MSE 229 A MSE 226 1_555 A N ILE 230 A ILE 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale9 A C LYS 298 A LYS 295 1_555 A N MSE 299 A MSE 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale10 A C MSE 299 A MSE 296 1_555 A N ARG 300 A ARG 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale11 A C ILE 358 A ILE 355 1_555 A N MSE 359 A MSE 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale12 A C MSE 359 A MSE 356 1_555 A N GLU 360 A GLU 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale13 A C THR 402 A THR 399 1_555 A N MSE 403 A MSE 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale14 A C MSE 403 A MSE 400 1_555 A N SER 404 A SER 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
metalc ? metalc1 A OG1 THR 131 A THR 128 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc2 B O2B ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? 
metalc ? metalc3 B O1G ANP . A ANP 501 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? 
metalc ? metalc4 C MG MG . A MG 502 1_555 E O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc5 C MG MG . A MG 502 1_555 E O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc6 C MG MG . A MG 502 1_555 E O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 78 n n 
PG O2G ANP sing 79 n n 
PG O3G ANP sing 80 n n 
PG N3B ANP sing 81 n n 
O2G HOG2 ANP sing 82 n n 
O3G HOG3 ANP sing 83 n n 
PB O1B ANP doub 84 n n 
PB O2B ANP sing 85 n n 
PB N3B ANP sing 86 n n 
PB O3A ANP sing 87 n n 
O2B HOB2 ANP sing 88 n n 
N3B HNB1 ANP sing 89 n n 
PA O1A ANP doub 90 n n 
PA O2A ANP sing 91 n n 
PA O3A ANP sing 92 n n 
PA O5' ANP sing 93 n n 
O2A HOA2 ANP sing 94 n n 
O5' C5' ANP sing 95 n n 
C5' C4' ANP sing 96 n n 
C5' "H5'1" ANP sing 97 n n 
C5' "H5'2" ANP sing 98 n n 
C4' O4' ANP sing 99 n n 
C4' C3' ANP sing 100 n n 
C4' H4' ANP sing 101 n n 
O4' C1' ANP sing 102 n n 
C3' O3' ANP sing 103 n n 
C3' C2' ANP sing 104 n n 
C3' H3' ANP sing 105 n n 
O3' HO3' ANP sing 106 n n 
C2' O2' ANP sing 107 n n 
C2' C1' ANP sing 108 n n 
C2' H2' ANP sing 109 n n 
O2' HO2' ANP sing 110 n n 
C1' N9 ANP sing 111 n n 
C1' H1' ANP sing 112 n n 
N9 C8 ANP sing 113 n y 
N9 C4 ANP sing 114 n y 
C8 N7 ANP doub 115 n y 
C8 H8 ANP sing 116 n n 
N7 C5 ANP sing 117 n y 
C5 C6 ANP sing 118 n y 
C5 C4 ANP doub 119 n y 
C6 N6 ANP sing 120 n n 
C6 N1 ANP doub 121 n y 
N6 HN61 ANP sing 122 n n 
N6 HN62 ANP sing 123 n n 
N1 C2 ANP sing 124 n y 
C2 N3 ANP doub 125 n y 
C2 H2 ANP sing 126 n n 
N3 C4 ANP sing 127 n y 
#
_atom_sites.entry_id                     4OHV 
_atom_sites.fract_transf_matrix[1][1]    0.009929 
_atom_sites.fract_transf_matrix[1][2]    0.005732 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011464 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024765 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP A 1 501 1 ANP ANP . 
C 3 MG A 1 502 2 MG MG . 
D 4 2PE A 1 503 11 2PE 2PE . 
E 5 HOH A 1 601 1 HOH HOH . 
E 5 HOH A 2 602 2 HOH HOH . 
E 5 HOH A 3 603 3 HOH HOH . 
E 5 HOH A 4 604 4 HOH HOH . 
E 5 HOH A 5 605 5 HOH HOH . 
E 5 HOH A 6 606 6 HOH HOH . 
E 5 HOH A 7 607 7 HOH HOH . 
E 5 HOH A 8 608 8 HOH HOH . 
E 5 HOH A 9 609 9 HOH HOH . 
E 5 HOH A 10 610 10 HOH HOH . 
E 5 HOH A 11 611 11 HOH HOH . 
E 5 HOH A 12 612 12 HOH HOH . 
E 5 HOH A 13 613 13 HOH HOH . 
E 5 HOH A 14 614 14 HOH HOH . 
E 5 HOH A 15 615 15 HOH HOH . 
E 5 HOH A 16 616 16 HOH HOH . 
E 5 HOH A 17 617 17 HOH HOH . 
E 5 HOH A 18 618 18 HOH HOH . 
E 5 HOH A 19 619 19 HOH HOH . 
E 5 HOH A 20 620 20 HOH HOH . 
E 5 HOH A 21 621 21 HOH HOH . 
E 5 HOH A 22 622 22 HOH HOH . 
E 5 HOH A 23 623 23 HOH HOH . 
E 5 HOH A 24 624 24 HOH HOH . 
E 5 HOH A 25 625 25 HOH HOH . 
E 5 HOH A 26 626 26 HOH HOH . 
E 5 HOH A 27 627 27 HOH HOH . 
E 5 HOH A 28 628 28 HOH HOH . 
E 5 HOH A 29 629 29 HOH HOH . 
E 5 HOH A 30 630 30 HOH HOH . 
E 5 HOH A 31 631 31 HOH HOH . 
E 5 HOH A 32 632 32 HOH HOH . 
E 5 HOH A 33 633 33 HOH HOH . 
E 5 HOH A 34 634 34 HOH HOH . 
E 5 HOH A 35 635 35 HOH HOH . 
E 5 HOH A 36 636 36 HOH HOH . 
E 5 HOH A 37 637 37 HOH HOH . 
E 5 HOH A 38 638 38 HOH HOH . 
E 5 HOH A 39 639 39 HOH HOH . 
E 5 HOH A 40 640 40 HOH HOH . 
E 5 HOH A 41 641 41 HOH HOH . 
E 5 HOH A 42 642 42 HOH HOH . 
E 5 HOH A 43 643 43 HOH HOH . 
E 5 HOH A 44 644 44 HOH HOH . 
E 5 HOH A 45 645 45 HOH HOH . 
E 5 HOH A 46 646 46 HOH HOH . 
E 5 HOH A 47 647 47 HOH HOH . 
E 5 HOH A 48 648 48 HOH HOH . 
E 5 HOH A 49 649 49 HOH HOH . 
E 5 HOH A 50 650 50 HOH HOH . 
E 5 HOH A 51 651 51 HOH HOH . 
E 5 HOH A 52 652 52 HOH HOH . 
E 5 HOH A 53 653 53 HOH HOH . 
E 5 HOH A 54 654 54 HOH HOH . 
E 5 HOH A 55 655 55 HOH HOH . 
E 5 HOH A 56 656 56 HOH HOH . 
E 5 HOH A 57 657 57 HOH HOH . 
E 5 HOH A 58 658 58 HOH HOH . 
E 5 HOH A 59 659 59 HOH HOH . 
E 5 HOH A 60 660 60 HOH HOH . 
E 5 HOH A 61 661 61 HOH HOH . 
E 5 HOH A 62 662 62 HOH HOH . 
E 5 HOH A 63 663 63 HOH HOH . 
E 5 HOH A 64 664 64 HOH HOH . 
E 5 HOH A 65 665 65 HOH HOH . 
E 5 HOH A 66 666 66 HOH HOH . 
E 5 HOH A 67 667 67 HOH HOH . 
E 5 HOH A 68 668 68 HOH HOH . 
E 5 HOH A 69 669 69 HOH HOH . 
E 5 HOH A 70 670 70 HOH HOH . 
E 5 HOH A 71 671 71 HOH HOH . 
E 5 HOH A 72 672 72 HOH HOH . 
E 5 HOH A 73 673 73 HOH HOH . 
E 5 HOH A 74 674 74 HOH HOH . 
E 5 HOH A 75 675 75 HOH HOH . 
E 5 HOH A 76 676 76 HOH HOH . 
E 5 HOH A 77 677 77 HOH HOH . 
E 5 HOH A 78 678 78 HOH HOH . 
E 5 HOH A 79 679 79 HOH HOH . 
E 5 HOH A 80 680 80 HOH HOH . 
E 5 HOH A 81 681 81 HOH HOH . 
E 5 HOH A 82 682 82 HOH HOH . 
E 5 HOH A 83 683 83 HOH HOH . 
E 5 HOH A 84 684 84 HOH HOH . 
E 5 HOH A 85 685 85 HOH HOH . 
E 5 HOH A 86 686 86 HOH HOH . 
E 5 HOH A 87 687 87 HOH HOH . 
E 5 HOH A 88 688 88 HOH HOH . 
E 5 HOH A 89 689 89 HOH HOH . 
E 5 HOH A 90 690 90 HOH HOH . 
E 5 HOH A 91 691 91 HOH HOH . 
E 5 HOH A 92 692 92 HOH HOH . 
E 5 HOH A 93 693 93 HOH HOH . 
E 5 HOH A 94 694 94 HOH HOH . 
E 5 HOH A 95 695 95 HOH HOH . 
E 5 HOH A 96 696 96 HOH HOH . 
E 5 HOH A 97 697 97 HOH HOH . 
E 5 HOH A 98 698 98 HOH HOH . 
E 5 HOH A 99 699 99 HOH HOH . 
E 5 HOH A 100 700 100 HOH HOH . 
E 5 HOH A 101 701 101 HOH HOH . 
E 5 HOH A 102 702 102 HOH HOH . 
E 5 HOH A 103 703 103 HOH HOH . 
E 5 HOH A 104 704 104 HOH HOH . 
E 5 HOH A 105 705 105 HOH HOH . 
E 5 HOH A 106 706 106 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . B 2 -9.691 24.451 11.171 1 32.36 ? PG ANP 501 A 1 
HETATM 2 O O1G ANP . . . B 2 -10.818 24.79 10.249 1 31.37 ? O1G ANP 501 A 1 
HETATM 3 O O2G ANP . . . B 2 -10.2 23.729 12.377 1 32.18 ? O2G ANP 501 A 1 
HETATM 4 O O3G ANP . . . B 2 -8.65 25.519 11.412 1 34.13 ? O3G ANP 501 A 1 
HETATM 5 P PB ANP . . . B 2 -9.397 22.207 9.198 1 28.48 ? PB ANP 501 A 1 
HETATM 6 O O1B ANP . . . B 2 -10.178 21.163 9.962 1 30.04 ? O1B ANP 501 A 1 
HETATM 7 O O2B ANP . . . B 2 -10.27 22.885 8.184 1 29.13 ? O2B ANP 501 A 1 
HETATM 8 N N3B ANP . . . B 2 -8.67 23.335 10.299 1 29.78 ? N3B ANP 501 A 1 
HETATM 9 P PA ANP . . . B 2 -7.514 21.95 7.063 1 29.78 ? PA ANP 501 A 1 
HETATM 10 O O1A ANP . . . B 2 -7.463 23.466 7.118 1 29.81 ? O1A ANP 501 A 1 
HETATM 11 O O2A ANP . . . B 2 -8.232 21.222 5.957 1 27.86 ? O2A ANP 501 A 1 
HETATM 12 O O3A ANP . . . B 2 -8.123 21.511 8.487 1 28.66 ? O3A ANP 501 A 1 
HETATM 13 O O5' ANP . . . B 2 -6.02 21.331 7.121 1 30.32 ? O5' ANP 501 A 1 
HETATM 14 C C5' ANP . . . B 2 -4.995 21.913 7.949 1 29.58 ? C5' ANP 501 A 1 
HETATM 15 C C4' ANP . . . B 2 -3.649 21.851 7.243 1 29.03 ? C4' ANP 501 A 1 
HETATM 16 O O4' ANP . . . B 2 -3.359 20.474 6.998 1 29.47 ? O4' ANP 501 A 1 
HETATM 17 C C3' ANP . . . B 2 -3.643 22.512 5.871 1 29.74 ? C3' ANP 501 A 1 
HETATM 18 O O3' ANP . . . B 2 -2.386 23.123 5.593 1 30.4 ? O3' ANP 501 A 1 
HETATM 19 C C2' ANP . . . B 2 -3.762 21.386 4.883 1 29.49 ? C2' ANP 501 A 1 
HETATM 20 O O2' ANP . . . B 2 -3.09 21.719 3.668 1 31.02 ? O2' ANP 501 A 1 
HETATM 21 C C1' ANP . . . B 2 -3.067 20.263 5.619 1 28.34 ? C1' ANP 501 A 1 
HETATM 22 N N9 ANP . . . B 2 -3.52 18.921 5.203 1 27.87 ? N9 ANP 501 A 1 
HETATM 23 C C8 ANP . . . B 2 -4.779 18.449 5.192 1 28.03 ? C8 ANP 501 A 1 
HETATM 24 N N7 ANP . . . B 2 -4.823 17.17 4.757 1 26.84 ? N7 ANP 501 A 1 
HETATM 25 C C5 ANP . . . B 2 -3.564 16.826 4.483 1 27.71 ? C5 ANP 501 A 1 
HETATM 26 C C6 ANP . . . B 2 -2.896 15.613 4.001 1 28.31 ? C6 ANP 501 A 1 
HETATM 27 N N6 ANP . . . B 2 -3.632 14.52 3.702 1 29.28 ? N6 ANP 501 A 1 
HETATM 28 N N1 ANP . . . B 2 -1.548 15.645 3.857 1 29.83 ? N1 ANP 501 A 1 
HETATM 29 C C2 ANP . . . B 2 -0.817 16.741 4.154 1 29.6 ? C2 ANP 501 A 1 
HETATM 30 N N3 ANP . . . B 2 -1.368 17.88 4.61 1 29.47 ? N3 ANP 501 A 1 
HETATM 31 C C4 ANP . . . B 2 -2.709 17.972 4.784 1 28.24 ? C4 ANP 501 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           31 
#