data_4OK3 # _model_server_result.job_id dHW3CWYTRTdMfVMILJPv3g _model_server_result.datetime_utc '2024-11-22 09:35:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ok3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":703}' # _entry.id 4OK3 # _exptl.entry_id 4OK3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OK3 _cell.length_a 81.394 _cell.length_b 104.232 _cell.length_c 117.954 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OK3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 271 A ASP 437 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc2 A OD1 ASP 271 A ASP 437 1_555 D CA CA . A CA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc3 A OD2 ASP 271 A ASP 437 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? metalc ? metalc4 A OE2 GLU 281 A GLU 447 1_555 E CA CA . A CA 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc5 D CA CA . A CA 702 1_555 F O HOH . A HOH 839 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? metalc ? metalc6 D CA CA . A CA 702 1_555 B OD2 ASP 271 B ASP 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc7 D CA CA . A CA 702 1_555 G O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc8 D CA CA . A CA 702 1_555 G O HOH . B HOH 737 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc9 D CA CA . A CA 702 1_555 G O HOH . B HOH 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc10 E CA CA . A CA 703 1_555 F O HOH . A HOH 839 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc11 E CA CA . A CA 703 1_555 B OD1 ASP 271 B ASP 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc12 E CA CA . A CA 703 1_555 B OD2 ASP 271 B ASP 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.143 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4OK3 _atom_sites.fract_transf_matrix[1][1] 0.012286 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2SY A 1 701 999 2SY 81 . D 3 CA A 1 702 1001 CA CA . E 3 CA A 1 703 1002 CA CA . F 4 HOH A 1 801 2 HOH HOH . F 4 HOH A 2 802 4 HOH HOH . F 4 HOH A 3 803 5 HOH HOH . F 4 HOH A 4 804 6 HOH HOH . F 4 HOH A 5 805 10 HOH HOH . F 4 HOH A 6 806 11 HOH HOH . F 4 HOH A 7 807 12 HOH HOH . F 4 HOH A 8 808 17 HOH HOH . F 4 HOH A 9 809 20 HOH HOH . F 4 HOH A 10 810 22 HOH HOH . F 4 HOH A 11 811 23 HOH HOH . F 4 HOH A 12 812 26 HOH HOH . F 4 HOH A 13 813 35 HOH HOH . F 4 HOH A 14 814 36 HOH HOH . F 4 HOH A 15 815 39 HOH HOH . F 4 HOH A 16 816 42 HOH HOH . F 4 HOH A 17 817 44 HOH HOH . F 4 HOH A 18 818 45 HOH HOH . F 4 HOH A 19 819 46 HOH HOH . F 4 HOH A 20 820 47 HOH HOH . F 4 HOH A 21 821 48 HOH HOH . F 4 HOH A 22 822 49 HOH HOH . F 4 HOH A 23 823 53 HOH HOH . F 4 HOH A 24 824 54 HOH HOH . F 4 HOH A 25 825 55 HOH HOH . F 4 HOH A 26 826 56 HOH HOH . F 4 HOH A 27 827 57 HOH HOH . F 4 HOH A 28 828 58 HOH HOH . F 4 HOH A 29 829 62 HOH HOH . F 4 HOH A 30 830 64 HOH HOH . F 4 HOH A 31 831 70 HOH HOH . F 4 HOH A 32 832 71 HOH HOH . F 4 HOH A 33 833 73 HOH HOH . F 4 HOH A 34 834 74 HOH HOH . F 4 HOH A 35 835 75 HOH HOH . F 4 HOH A 36 836 77 HOH HOH . F 4 HOH A 37 837 81 HOH HOH . F 4 HOH A 38 838 84 HOH HOH . F 4 HOH A 39 839 89 HOH HOH . F 4 HOH A 40 840 91 HOH HOH . F 4 HOH A 41 841 93 HOH HOH . F 4 HOH A 42 842 98 HOH HOH . F 4 HOH A 43 843 100 HOH HOH . F 4 HOH A 44 844 1 HOH HOH . F 4 HOH A 45 845 7 HOH HOH . F 4 HOH A 46 846 8 HOH HOH . G 4 HOH B 1 701 1 HOH HOH . G 4 HOH B 2 702 7 HOH HOH . G 4 HOH B 3 703 8 HOH HOH . G 4 HOH B 4 704 9 HOH HOH . G 4 HOH B 5 705 13 HOH HOH . G 4 HOH B 6 706 14 HOH HOH . G 4 HOH B 7 707 15 HOH HOH . G 4 HOH B 8 708 16 HOH HOH . G 4 HOH B 9 709 18 HOH HOH . G 4 HOH B 10 710 19 HOH HOH . G 4 HOH B 11 711 21 HOH HOH . G 4 HOH B 12 712 24 HOH HOH . G 4 HOH B 13 713 25 HOH HOH . G 4 HOH B 14 714 27 HOH HOH . G 4 HOH B 15 715 28 HOH HOH . G 4 HOH B 16 716 29 HOH HOH . G 4 HOH B 17 717 30 HOH HOH . G 4 HOH B 18 718 31 HOH HOH . G 4 HOH B 19 719 33 HOH HOH . G 4 HOH B 20 720 34 HOH HOH . G 4 HOH B 21 721 37 HOH HOH . G 4 HOH B 22 722 38 HOH HOH . G 4 HOH B 23 723 40 HOH HOH . G 4 HOH B 24 724 41 HOH HOH . G 4 HOH B 25 725 43 HOH HOH . G 4 HOH B 26 726 51 HOH HOH . G 4 HOH B 27 727 52 HOH HOH . G 4 HOH B 28 728 59 HOH HOH . G 4 HOH B 29 729 60 HOH HOH . G 4 HOH B 30 730 61 HOH HOH . G 4 HOH B 31 731 63 HOH HOH . G 4 HOH B 32 732 65 HOH HOH . G 4 HOH B 33 733 66 HOH HOH . G 4 HOH B 34 734 67 HOH HOH . G 4 HOH B 35 735 68 HOH HOH . G 4 HOH B 36 736 69 HOH HOH . G 4 HOH B 37 737 72 HOH HOH . G 4 HOH B 38 738 76 HOH HOH . G 4 HOH B 39 739 78 HOH HOH . G 4 HOH B 40 740 79 HOH HOH . G 4 HOH B 41 741 82 HOH HOH . G 4 HOH B 42 742 83 HOH HOH . G 4 HOH B 43 743 85 HOH HOH . G 4 HOH B 44 744 86 HOH HOH . G 4 HOH B 45 745 87 HOH HOH . G 4 HOH B 46 746 88 HOH HOH . G 4 HOH B 47 747 92 HOH HOH . G 4 HOH B 48 748 94 HOH HOH . G 4 HOH B 49 749 95 HOH HOH . G 4 HOH B 50 750 96 HOH HOH . G 4 HOH B 51 751 97 HOH HOH . G 4 HOH B 52 752 99 HOH HOH . G 4 HOH B 53 753 101 HOH HOH . G 4 HOH B 54 754 2 HOH HOH . G 4 HOH B 55 755 3 HOH HOH . G 4 HOH B 56 756 4 HOH HOH . G 4 HOH B 57 757 5 HOH HOH . G 4 HOH B 58 758 6 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -12.462 _atom_site.Cartn_y -23.935 _atom_site.Cartn_z 5.876 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 76.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #