data_4OK9 # _model_server_result.job_id naRxAzRuFcWW1fvF23m2ew _model_server_result.datetime_utc '2024-11-16 11:58:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ok9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 4OK9 # _exptl.entry_id 4OK9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.162 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HISTIDINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4OK9 _cell.length_a 90.811 _cell.length_b 90.811 _cell.length_c 76.672 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OK9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 90.811 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 45.4055 78.644633 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 93 A GLU 93 1_555 D MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 A OD2 ASP 96 A ASP 96 1_555 E MG MG . A MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc3 C MG MG . A MG 201 1_555 F OXT HIS . A HIS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc4 C MG MG . A MG 201 1_555 K O HOH . A HOH 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc5 D MG MG . A MG 202 1_555 K O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc6 E MG MG . A MG 203 1_555 K O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc7 B OE2 GLU 93 B GLU 93 1_555 H MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc8 B OD2 ASP 96 B ASP 96 1_555 I MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc9 G MG MG . B MG 201 1_555 J O HIS . B HIS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc10 G MG MG . B MG 201 1_555 L O HOH . B HOH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? metalc ? metalc11 H MG MG . B MG 202 1_555 L O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc12 I MG MG . B MG 203 1_555 L O HOH . B HOH 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? # _chem_comp.formula 'C6 H10 N3 O2 1' _chem_comp.formula_weight 156.162 _chem_comp.id HIS _chem_comp.mon_nstd_flag y _chem_comp.name HISTIDINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HIS sing 129 n n N H HIS sing 130 n n N H2 HIS sing 131 n n CA C HIS sing 132 n n CA CB HIS sing 133 n n CA HA HIS sing 134 n n C O HIS doub 135 n n C OXT HIS sing 136 n n CB CG HIS sing 137 n n CB HB2 HIS sing 138 n n CB HB3 HIS sing 139 n n CG ND1 HIS sing 140 n y CG CD2 HIS doub 141 n y ND1 CE1 HIS doub 142 n y ND1 HD1 HIS sing 143 n n CD2 NE2 HIS sing 144 n y CD2 HD2 HIS sing 145 n n CE1 NE2 HIS sing 146 n y CE1 HE1 HIS sing 147 n n NE2 HE2 HIS sing 148 n n OXT HXT HIS sing 149 n n # _atom_sites.entry_id 4OK9 _atom_sites.fract_transf_matrix[1][1] 0.011012 _atom_sites.fract_transf_matrix[1][2] 0.006358 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012715 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013043 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 201 1 MG MG . D 2 MG A 1 202 3 MG MG . E 2 MG A 1 203 4 MG MG . F 3 HIS A 1 204 1 HIS HIS . G 2 MG B 1 201 2 MG MG . H 2 MG B 1 202 5 MG MG . I 2 MG B 1 203 6 MG MG . J 3 HIS B 1 204 2 HIS HIS . K 4 HOH A 1 301 2 HOH HOH . K 4 HOH A 2 302 3 HOH HOH . K 4 HOH A 3 303 4 HOH HOH . K 4 HOH A 4 304 8 HOH HOH . K 4 HOH A 5 305 9 HOH HOH . K 4 HOH A 6 306 11 HOH HOH . K 4 HOH A 7 307 13 HOH HOH . K 4 HOH A 8 308 17 HOH HOH . K 4 HOH A 9 309 18 HOH HOH . K 4 HOH A 10 310 20 HOH HOH . K 4 HOH A 11 311 25 HOH HOH . K 4 HOH A 12 312 27 HOH HOH . K 4 HOH A 13 313 28 HOH HOH . K 4 HOH A 14 314 29 HOH HOH . K 4 HOH A 15 315 30 HOH HOH . K 4 HOH A 16 316 31 HOH HOH . K 4 HOH A 17 317 32 HOH HOH . K 4 HOH A 18 318 33 HOH HOH . K 4 HOH A 19 319 35 HOH HOH . K 4 HOH A 20 320 37 HOH HOH . K 4 HOH A 21 321 38 HOH HOH . K 4 HOH A 22 322 41 HOH HOH . K 4 HOH A 23 323 47 HOH HOH . K 4 HOH A 24 324 49 HOH HOH . K 4 HOH A 25 325 53 HOH HOH . K 4 HOH A 26 326 57 HOH HOH . K 4 HOH A 27 327 61 HOH HOH . K 4 HOH A 28 328 63 HOH HOH . K 4 HOH A 29 329 64 HOH HOH . K 4 HOH A 30 330 66 HOH HOH . K 4 HOH A 31 331 68 HOH HOH . K 4 HOH A 32 332 69 HOH HOH . K 4 HOH A 33 333 70 HOH HOH . K 4 HOH A 34 334 71 HOH HOH . K 4 HOH A 35 335 72 HOH HOH . K 4 HOH A 36 336 73 HOH HOH . K 4 HOH A 37 337 74 HOH HOH . K 4 HOH A 38 338 79 HOH HOH . K 4 HOH A 39 339 80 HOH HOH . K 4 HOH A 40 340 81 HOH HOH . K 4 HOH A 41 341 82 HOH HOH . K 4 HOH A 42 342 85 HOH HOH . K 4 HOH A 43 343 87 HOH HOH . K 4 HOH A 44 344 88 HOH HOH . K 4 HOH A 45 345 90 HOH HOH . K 4 HOH A 46 346 91 HOH HOH . K 4 HOH A 47 347 95 HOH HOH . K 4 HOH A 48 348 97 HOH HOH . K 4 HOH A 49 349 99 HOH HOH . K 4 HOH A 50 350 102 HOH HOH . K 4 HOH A 51 351 104 HOH HOH . K 4 HOH A 52 352 106 HOH HOH . K 4 HOH A 53 353 110 HOH HOH . K 4 HOH A 54 354 115 HOH HOH . K 4 HOH A 55 355 116 HOH HOH . K 4 HOH A 56 356 117 HOH HOH . K 4 HOH A 57 357 118 HOH HOH . K 4 HOH A 58 358 119 HOH HOH . K 4 HOH A 59 359 120 HOH HOH . K 4 HOH A 60 360 123 HOH HOH . K 4 HOH A 61 361 127 HOH HOH . K 4 HOH A 62 362 128 HOH HOH . K 4 HOH A 63 363 132 HOH HOH . K 4 HOH A 64 364 133 HOH HOH . K 4 HOH A 65 365 136 HOH HOH . K 4 HOH A 66 366 137 HOH HOH . K 4 HOH A 67 367 139 HOH HOH . K 4 HOH A 68 368 141 HOH HOH . K 4 HOH A 69 369 142 HOH HOH . K 4 HOH A 70 370 144 HOH HOH . K 4 HOH A 71 371 145 HOH HOH . K 4 HOH A 72 372 146 HOH HOH . K 4 HOH A 73 373 147 HOH HOH . K 4 HOH A 74 374 151 HOH HOH . K 4 HOH A 75 375 153 HOH HOH . K 4 HOH A 76 376 154 HOH HOH . K 4 HOH A 77 377 155 HOH HOH . K 4 HOH A 78 378 157 HOH HOH . K 4 HOH A 79 379 158 HOH HOH . K 4 HOH A 80 380 159 HOH HOH . K 4 HOH A 81 381 161 HOH HOH . K 4 HOH A 82 382 164 HOH HOH . K 4 HOH A 83 383 166 HOH HOH . K 4 HOH A 84 384 173 HOH HOH . K 4 HOH A 85 385 174 HOH HOH . K 4 HOH A 86 386 176 HOH HOH . K 4 HOH A 87 387 177 HOH HOH . K 4 HOH A 88 388 178 HOH HOH . K 4 HOH A 89 389 184 HOH HOH . K 4 HOH A 90 390 188 HOH HOH . K 4 HOH A 91 391 191 HOH HOH . K 4 HOH A 92 392 193 HOH HOH . K 4 HOH A 93 393 194 HOH HOH . K 4 HOH A 94 394 201 HOH HOH . K 4 HOH A 95 395 202 HOH HOH . K 4 HOH A 96 396 207 HOH HOH . K 4 HOH A 97 397 209 HOH HOH . K 4 HOH A 98 398 210 HOH HOH . K 4 HOH A 99 399 211 HOH HOH . L 4 HOH B 1 301 1 HOH HOH . L 4 HOH B 2 302 5 HOH HOH . L 4 HOH B 3 303 6 HOH HOH . L 4 HOH B 4 304 7 HOH HOH . L 4 HOH B 5 305 10 HOH HOH . L 4 HOH B 6 306 15 HOH HOH . L 4 HOH B 7 307 16 HOH HOH . L 4 HOH B 8 308 19 HOH HOH . L 4 HOH B 9 309 21 HOH HOH . L 4 HOH B 10 310 22 HOH HOH . L 4 HOH B 11 311 23 HOH HOH . L 4 HOH B 12 312 24 HOH HOH . L 4 HOH B 13 313 26 HOH HOH . L 4 HOH B 14 314 34 HOH HOH . L 4 HOH B 15 315 36 HOH HOH . L 4 HOH B 16 316 39 HOH HOH . L 4 HOH B 17 317 40 HOH HOH . L 4 HOH B 18 318 43 HOH HOH . L 4 HOH B 19 319 45 HOH HOH . L 4 HOH B 20 320 46 HOH HOH . L 4 HOH B 21 321 48 HOH HOH . L 4 HOH B 22 322 50 HOH HOH . L 4 HOH B 23 323 52 HOH HOH . L 4 HOH B 24 324 54 HOH HOH . L 4 HOH B 25 325 55 HOH HOH . L 4 HOH B 26 326 56 HOH HOH . L 4 HOH B 27 327 58 HOH HOH . L 4 HOH B 28 328 59 HOH HOH . L 4 HOH B 29 329 60 HOH HOH . L 4 HOH B 30 330 62 HOH HOH . L 4 HOH B 31 331 65 HOH HOH . L 4 HOH B 32 332 67 HOH HOH . L 4 HOH B 33 333 75 HOH HOH . L 4 HOH B 34 334 76 HOH HOH . L 4 HOH B 35 335 77 HOH HOH . L 4 HOH B 36 336 78 HOH HOH . L 4 HOH B 37 337 83 HOH HOH . L 4 HOH B 38 338 84 HOH HOH . L 4 HOH B 39 339 86 HOH HOH . L 4 HOH B 40 340 89 HOH HOH . L 4 HOH B 41 341 92 HOH HOH . L 4 HOH B 42 342 93 HOH HOH . L 4 HOH B 43 343 94 HOH HOH . L 4 HOH B 44 344 96 HOH HOH . L 4 HOH B 45 345 98 HOH HOH . L 4 HOH B 46 346 100 HOH HOH . L 4 HOH B 47 347 105 HOH HOH . L 4 HOH B 48 348 108 HOH HOH . L 4 HOH B 49 349 109 HOH HOH . L 4 HOH B 50 350 112 HOH HOH . L 4 HOH B 51 351 113 HOH HOH . L 4 HOH B 52 352 114 HOH HOH . L 4 HOH B 53 353 121 HOH HOH . L 4 HOH B 54 354 122 HOH HOH . L 4 HOH B 55 355 124 HOH HOH . L 4 HOH B 56 356 125 HOH HOH . L 4 HOH B 57 357 126 HOH HOH . L 4 HOH B 58 358 129 HOH HOH . L 4 HOH B 59 359 130 HOH HOH . L 4 HOH B 60 360 131 HOH HOH . L 4 HOH B 61 361 134 HOH HOH . L 4 HOH B 62 362 135 HOH HOH . L 4 HOH B 63 363 138 HOH HOH . L 4 HOH B 64 364 140 HOH HOH . L 4 HOH B 65 365 143 HOH HOH . L 4 HOH B 66 366 149 HOH HOH . L 4 HOH B 67 367 150 HOH HOH . L 4 HOH B 68 368 152 HOH HOH . L 4 HOH B 69 369 156 HOH HOH . L 4 HOH B 70 370 162 HOH HOH . L 4 HOH B 71 371 163 HOH HOH . L 4 HOH B 72 372 165 HOH HOH . L 4 HOH B 73 373 167 HOH HOH . L 4 HOH B 74 374 168 HOH HOH . L 4 HOH B 75 375 169 HOH HOH . L 4 HOH B 76 376 175 HOH HOH . L 4 HOH B 77 377 181 HOH HOH . L 4 HOH B 78 378 182 HOH HOH . L 4 HOH B 79 379 195 HOH HOH . L 4 HOH B 80 380 198 HOH HOH . L 4 HOH B 81 381 200 HOH HOH . L 4 HOH B 82 382 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HIS . . . F 3 61.068 32.349 -0.124 1 25.45 ? N HIS 204 A 1 HETATM 2 C CA HIS . . . F 3 59.85 31.639 -0.63 1 24.78 ? CA HIS 204 A 1 HETATM 3 C C HIS . . . F 3 59.538 30.482 0.267 1 22.8 ? C HIS 204 A 1 HETATM 4 O O HIS . . . F 3 58.874 29.537 -0.123 1 20.62 ? O HIS 204 A 1 HETATM 5 C CB HIS . . . F 3 60.08 31.228 -2.077 1 24.04 ? CB HIS 204 A 1 HETATM 6 C CG HIS . . . F 3 60.169 32.391 -3.005 1 20.73 ? CG HIS 204 A 1 HETATM 7 N ND1 HIS . . . F 3 61.264 33.227 -3.047 1 21.15 ? ND1 HIS 204 A 1 HETATM 8 C CD2 HIS . . . F 3 59.274 32.899 -3.88 1 24.21 ? CD2 HIS 204 A 1 HETATM 9 C CE1 HIS . . . F 3 61.014 34.223 -3.867 1 21.64 ? CE1 HIS 204 A 1 HETATM 10 N NE2 HIS . . . F 3 59.827 34.032 -4.409 1 25.4 ? NE2 HIS 204 A 1 HETATM 11 O OXT HIS . . . F 3 59.944 30.418 1.458 1 18.5 ? OXT HIS 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 11 #