data_4OLB # _model_server_result.job_id 3_EQ0dPa_AhHVAWVtydMEg _model_server_result.datetime_utc '2024-11-27 16:15:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4olb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 4OLB # _exptl.entry_id 4OLB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.01 _cell.angle_gamma 90 _cell.entry_id 4OLB _cell.length_a 63.207 _cell.length_b 106.747 _cell.length_c 68.341 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OLB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 345 n n N H TRP sing 346 n n N H2 TRP sing 347 n n CA C TRP sing 348 n n CA CB TRP sing 349 n n CA HA TRP sing 350 n n C O TRP doub 351 n n C OXT TRP sing 352 n n CB CG TRP sing 353 n n CB HB2 TRP sing 354 n n CB HB3 TRP sing 355 n n CG CD1 TRP doub 356 n y CG CD2 TRP sing 357 n y CD1 NE1 TRP sing 358 n y CD1 HD1 TRP sing 359 n n CD2 CE2 TRP doub 360 n y CD2 CE3 TRP sing 361 n y NE1 CE2 TRP sing 362 n y NE1 HE1 TRP sing 363 n n CE2 CZ2 TRP sing 364 n y CE3 CZ3 TRP doub 365 n y CE3 HE3 TRP sing 366 n n CZ2 CH2 TRP doub 367 n y CZ2 HZ2 TRP sing 368 n n CZ3 CH2 TRP sing 369 n y CZ3 HZ3 TRP sing 370 n n CH2 HH2 TRP sing 371 n n OXT HXT TRP sing 372 n n # _atom_sites.entry_id 4OLB _atom_sites.fract_transf_matrix[1][1] 0.015821 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004839 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009368 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TRP A 1 901 901 TRP TRP . D 3 TRP A 1 902 902 TRP TRP . E 4 HOH A 1 1001 1 HOH HOH . E 4 HOH A 2 1002 2 HOH HOH . E 4 HOH A 3 1003 3 HOH HOH . E 4 HOH A 4 1004 4 HOH HOH . E 4 HOH A 5 1005 5 HOH HOH . E 4 HOH A 6 1006 6 HOH HOH . E 4 HOH A 7 1007 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . D 3 9.089 21.477 47.064 1 55.28 ? N TRP 902 A 1 HETATM 2 C CA TRP . . . D 3 8.495 22.709 47.57 1 54.53 ? CA TRP 902 A 1 HETATM 3 C C TRP . . . D 3 8.995 23.932 46.807 1 54.03 ? C TRP 902 A 1 HETATM 4 O O TRP . . . D 3 9.291 23.855 45.616 1 54.06 ? O TRP 902 A 1 HETATM 5 C CB TRP . . . D 3 8.78 22.873 49.064 1 54.08 ? CB TRP 902 A 1 HETATM 6 C CG TRP . . . D 3 7.941 21.998 49.945 1 51.36 ? CG TRP 902 A 1 HETATM 7 C CD1 TRP . . . D 3 8.376 20.988 50.754 1 51.24 ? CD1 TRP 902 A 1 HETATM 8 C CD2 TRP . . . D 3 6.52 22.055 50.104 1 50.37 ? CD2 TRP 902 A 1 HETATM 9 N NE1 TRP . . . D 3 7.313 20.416 51.409 1 51.35 ? NE1 TRP 902 A 1 HETATM 10 C CE2 TRP . . . D 3 6.16 21.054 51.027 1 49.91 ? CE2 TRP 902 A 1 HETATM 11 C CE3 TRP . . . D 3 5.514 22.857 49.556 1 48.06 ? CE3 TRP 902 A 1 HETATM 12 C CZ2 TRP . . . D 3 4.841 20.833 51.414 1 45.98 ? CZ2 TRP 902 A 1 HETATM 13 C CZ3 TRP . . . D 3 4.205 22.637 49.941 1 45.19 ? CZ3 TRP 902 A 1 HETATM 14 C CH2 TRP . . . D 3 3.88 21.633 50.86 1 44.52 ? CH2 TRP 902 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #