data_4OMP # _model_server_result.job_id 95CkqYgU9r2ti_AyNpHz2Q _model_server_result.datetime_utc '2025-07-19 05:34:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4omp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4OMP # _exptl.entry_id 4OMP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4OMP _cell.length_a 46.862 _cell.length_b 46.862 _cell.length_c 127.849 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OMP _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 240 n n C1 C2 PGE sing 241 n n C1 H1 PGE sing 242 n n C1 H12 PGE sing 243 n n O1 HO1 PGE sing 244 n n C2 O2 PGE sing 245 n n C2 H2 PGE sing 246 n n C2 H22 PGE sing 247 n n O2 C3 PGE sing 248 n n C3 C4 PGE sing 249 n n C3 H3 PGE sing 250 n n C3 H32 PGE sing 251 n n C4 O3 PGE sing 252 n n C4 H4 PGE sing 253 n n C4 H42 PGE sing 254 n n O4 C6 PGE sing 255 n n O4 HO4 PGE sing 256 n n C6 C5 PGE sing 257 n n C6 H6 PGE sing 258 n n C6 H62 PGE sing 259 n n C5 O3 PGE sing 260 n n C5 H5 PGE sing 261 n n C5 H52 PGE sing 262 n n # _atom_sites.entry_id 4OMP _atom_sites.fract_transf_matrix[1][1] 0.021339 _atom_sites.fract_transf_matrix[1][2] 0.01232 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02464 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007822 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 201 1 PGE PGE . C 3 PEG A 1 202 4 PEG PEG . D 4 HOH A 1 301 1 HOH HOH . D 4 HOH A 2 302 2 HOH HOH . D 4 HOH A 3 303 3 HOH HOH . D 4 HOH A 4 304 4 HOH HOH . D 4 HOH A 5 305 6 HOH HOH . D 4 HOH A 6 306 7 HOH HOH . D 4 HOH A 7 307 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . B 2 -8.885 -3.487 0.163 0.56 39.23 ? C1 PGE 201 A 1 HETATM 2 O O1 PGE . . . B 2 -8.213 -2.358 0.702 0.56 39.51 ? O1 PGE 201 A 1 HETATM 3 C C2 PGE . . . B 2 -10.331 -3.098 -0.029 0.56 38.23 ? C2 PGE 201 A 1 HETATM 4 O O2 PGE . . . B 2 -10.387 -1.694 -0.125 0.56 35.96 ? O2 PGE 201 A 1 HETATM 5 C C3 PGE . . . B 2 -11.69 -1.166 -0.074 0.56 34.43 ? C3 PGE 201 A 1 HETATM 6 C C4 PGE . . . B 2 -11.614 0.296 -0.467 0.56 34.22 ? C4 PGE 201 A 1 HETATM 7 O O4 PGE . . . B 2 -8.915 4.094 -0.37 0.56 42.86 ? O4 PGE 201 A 1 HETATM 8 C C6 PGE . . . B 2 -9.025 2.686 -0.18 0.56 36.35 ? C6 PGE 201 A 1 HETATM 9 C C5 PGE . . . B 2 -10.486 2.308 -0.051 0.56 36.32 ? C5 PGE 201 A 1 HETATM 10 O O3 PGE . . . B 2 -10.611 0.939 0.285 0.56 35.28 ? O3 PGE 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 10 #