data_4OMQ # _model_server_result.job_id 6cbz65SfYLSrjq_h7iQS5g _model_server_result.datetime_utc '2024-11-05 00:52:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4omq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4OMQ # _exptl.entry_id 4OMQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4OMQ _cell.length_a 46.65 _cell.length_b 46.65 _cell.length_c 127.2 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OMQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 240 n n C1 C2 PGE sing 241 n n C1 H1 PGE sing 242 n n C1 H12 PGE sing 243 n n O1 HO1 PGE sing 244 n n C2 O2 PGE sing 245 n n C2 H2 PGE sing 246 n n C2 H22 PGE sing 247 n n O2 C3 PGE sing 248 n n C3 C4 PGE sing 249 n n C3 H3 PGE sing 250 n n C3 H32 PGE sing 251 n n C4 O3 PGE sing 252 n n C4 H4 PGE sing 253 n n C4 H42 PGE sing 254 n n O4 C6 PGE sing 255 n n O4 HO4 PGE sing 256 n n C6 C5 PGE sing 257 n n C6 H6 PGE sing 258 n n C6 H62 PGE sing 259 n n C5 O3 PGE sing 260 n n C5 H5 PGE sing 261 n n C5 H52 PGE sing 262 n n # _atom_sites.entry_id 4OMQ _atom_sites.fract_transf_matrix[1][1] 0.021436 _atom_sites.fract_transf_matrix[1][2] 0.012376 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024752 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007862 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 201 201 PGE PGE . C 3 PEG A 1 202 202 PEG PEG . D 3 PEG A 1 203 203 PEG PEG . E 4 SO4 A 1 204 1 SO4 SO4 . F 5 HOH A 1 301 1 HOH HOH . F 5 HOH A 2 302 2 HOH HOH . F 5 HOH A 3 303 3 HOH HOH . F 5 HOH A 4 304 4 HOH HOH . F 5 HOH A 5 305 5 HOH HOH . F 5 HOH A 6 306 6 HOH HOH . F 5 HOH A 7 307 7 HOH HOH . F 5 HOH A 8 308 8 HOH HOH . F 5 HOH A 9 309 9 HOH HOH . F 5 HOH A 10 310 10 HOH HOH . F 5 HOH A 11 311 11 HOH HOH . F 5 HOH A 12 312 12 HOH HOH . F 5 HOH A 13 313 13 HOH HOH . F 5 HOH A 14 314 14 HOH HOH . F 5 HOH A 15 315 15 HOH HOH . F 5 HOH A 16 316 16 HOH HOH . F 5 HOH A 17 317 17 HOH HOH . F 5 HOH A 18 318 18 HOH HOH . F 5 HOH A 19 319 19 HOH HOH . F 5 HOH A 20 320 20 HOH HOH . F 5 HOH A 21 321 21 HOH HOH . F 5 HOH A 22 322 22 HOH HOH . F 5 HOH A 23 323 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . B 2 8.92 2.933 -0.335 0.61 25.57 ? C1 PGE 201 A 1 HETATM 2 O O1 PGE . . . B 2 7.857 2.618 0.562 0.61 27.44 ? O1 PGE 201 A 1 HETATM 3 C C2 PGE . . . B 2 10.219 2.294 0.127 0.61 28.3 ? C2 PGE 201 A 1 HETATM 4 O O2 PGE . . . B 2 10.324 0.94 -0.311 0.61 22.95 ? O2 PGE 201 A 1 HETATM 5 C C3 PGE . . . B 2 11.346 0.185 0.327 0.61 17.18 ? C3 PGE 201 A 1 HETATM 6 C C4 PGE . . . B 2 11.381 -1.268 -0.147 0.61 21.49 ? C4 PGE 201 A 1 HETATM 7 O O4 PGE . . . B 2 7.877 -4.592 -0.663 0.61 15.74 ? O4 PGE 201 A 1 HETATM 8 C C6 PGE . . . B 2 9.009 -4.065 0.044 0.61 22.88 ? C6 PGE 201 A 1 HETATM 9 C C5 PGE . . . B 2 9.453 -2.699 -0.457 0.61 23.46 ? C5 PGE 201 A 1 HETATM 10 O O3 PGE . . . B 2 10.363 -2.079 0.449 0.61 24.95 ? O3 PGE 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #