data_4OMW # _model_server_result.job_id k-PHv4uSao9BaMLnNKtT9g _model_server_result.datetime_utc '2024-11-29 01:41:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4omw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":202}' # _entry.id 4OMW # _exptl.entry_id 4OMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 264.363 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Tetracaine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OMW _cell.length_a 150.05 _cell.length_b 95.27 _cell.length_c 55.35 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,L,M 1 1 C,D,G,H,I,J,K,N,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 160 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf2 A SG CYS 106 A CYS 106 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? disulf ? disulf3 B SG CYS 66 B CYS 66 1_555 B SG CYS 160 B CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf4 B SG CYS 106 B CYS 106 1_555 B SG CYS 119 B CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf5 C SG CYS 66 C CYS 66 1_555 C SG CYS 160 C CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf6 C SG CYS 106 C CYS 106 1_555 C SG CYS 119 C CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf7 D SG CYS 66 D CYS 66 1_555 D SG CYS 160 D CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf8 D SG CYS 106 D CYS 106 1_555 D SG CYS 119 D CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? # _chem_comp.formula 'C15 H24 N2 O2' _chem_comp.formula_weight 264.363 _chem_comp.id TE4 _chem_comp.mon_nstd_flag . _chem_comp.name Tetracaine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-(dimethylamino)ethyl 4-(butylamino)benzoate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 N1 TE4 sing 307 n n C14 N1 TE4 sing 308 n n N1 C9 TE4 sing 309 n n C9 C8 TE4 sing 310 n n C8 O1 TE4 sing 311 n n C13 C12 TE4 sing 312 n n O1 C7 TE4 sing 313 n n C11 C12 TE4 sing 314 n n C11 C10 TE4 sing 315 n n C5 C6 TE4 doub 316 n y C5 C4 TE4 sing 317 n y C7 C4 TE4 sing 318 n n C7 O2 TE4 doub 319 n n C6 C1 TE4 sing 320 n y C4 C3 TE4 doub 321 n y C1 N2 TE4 sing 322 n n C1 C2 TE4 doub 323 n y C10 N2 TE4 sing 324 n n C3 C2 TE4 sing 325 n y C8 H1 TE4 sing 326 n n C8 H2 TE4 sing 327 n n C9 H3 TE4 sing 328 n n C9 H4 TE4 sing 329 n n C14 H6 TE4 sing 330 n n C14 H7 TE4 sing 331 n n C14 H8 TE4 sing 332 n n C15 H9 TE4 sing 333 n n C15 H10 TE4 sing 334 n n C15 H11 TE4 sing 335 n n C5 H12 TE4 sing 336 n n C6 H13 TE4 sing 337 n n C2 H14 TE4 sing 338 n n C3 H15 TE4 sing 339 n n N2 H16 TE4 sing 340 n n C10 H17 TE4 sing 341 n n C10 H18 TE4 sing 342 n n C11 H19 TE4 sing 343 n n C11 H20 TE4 sing 344 n n C12 H21 TE4 sing 345 n n C12 H22 TE4 sing 346 n n C13 H23 TE4 sing 347 n n C13 H24 TE4 sing 348 n n C13 H25 TE4 sing 349 n n # _atom_sites.entry_id 4OMW _atom_sites.fract_transf_matrix[1][1] 0.006664 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010496 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 201 1 GOL GOL . F 2 GOL B 1 201 3 GOL GOL . G 3 SO4 C 1 201 1 SO4 SO4 . H 3 SO4 C 1 202 3 SO4 SO4 . I 2 GOL C 1 203 2 GOL GOL . J 3 SO4 D 1 201 2 SO4 SO4 . K 4 TE4 D 1 202 1 TE4 TE4 . L 5 HOH A 1 301 12 HOH HOH . L 5 HOH A 2 302 13 HOH HOH . L 5 HOH A 3 303 15 HOH HOH . L 5 HOH A 4 304 17 HOH HOH . L 5 HOH A 5 305 20 HOH HOH . L 5 HOH A 6 306 29 HOH HOH . L 5 HOH A 7 307 34 HOH HOH . L 5 HOH A 8 308 37 HOH HOH . L 5 HOH A 9 309 39 HOH HOH . L 5 HOH A 10 310 57 HOH HOH . L 5 HOH A 11 311 59 HOH HOH . L 5 HOH A 12 312 62 HOH HOH . L 5 HOH A 13 313 63 HOH HOH . L 5 HOH A 14 314 76 HOH HOH . L 5 HOH A 15 315 80 HOH HOH . L 5 HOH A 16 316 82 HOH HOH . L 5 HOH A 17 317 102 HOH HOH . L 5 HOH A 18 318 104 HOH HOH . L 5 HOH A 19 319 105 HOH HOH . L 5 HOH A 20 320 107 HOH HOH . L 5 HOH A 21 321 108 HOH HOH . L 5 HOH A 22 322 109 HOH HOH . L 5 HOH A 23 323 112 HOH HOH . L 5 HOH A 24 324 128 HOH HOH . L 5 HOH A 25 325 129 HOH HOH . L 5 HOH A 26 326 131 HOH HOH . L 5 HOH A 27 327 132 HOH HOH . L 5 HOH A 28 328 134 HOH HOH . L 5 HOH A 29 329 135 HOH HOH . L 5 HOH A 30 330 138 HOH HOH . L 5 HOH A 31 331 139 HOH HOH . L 5 HOH A 32 332 141 HOH HOH . L 5 HOH A 33 333 156 HOH HOH . L 5 HOH A 34 334 158 HOH HOH . L 5 HOH A 35 335 176 HOH HOH . L 5 HOH A 36 336 182 HOH HOH . L 5 HOH A 37 337 189 HOH HOH . L 5 HOH A 38 338 190 HOH HOH . L 5 HOH A 39 339 191 HOH HOH . L 5 HOH A 40 340 192 HOH HOH . L 5 HOH A 41 341 193 HOH HOH . L 5 HOH A 42 342 194 HOH HOH . L 5 HOH A 43 343 200 HOH HOH . L 5 HOH A 44 344 207 HOH HOH . M 5 HOH B 1 301 3 HOH HOH . M 5 HOH B 2 302 5 HOH HOH . M 5 HOH B 3 303 6 HOH HOH . M 5 HOH B 4 304 9 HOH HOH . M 5 HOH B 5 305 14 HOH HOH . M 5 HOH B 6 306 18 HOH HOH . M 5 HOH B 7 307 19 HOH HOH . M 5 HOH B 8 308 22 HOH HOH . M 5 HOH B 9 309 26 HOH HOH . M 5 HOH B 10 310 27 HOH HOH . M 5 HOH B 11 311 30 HOH HOH . M 5 HOH B 12 312 31 HOH HOH . M 5 HOH B 13 313 35 HOH HOH . M 5 HOH B 14 314 38 HOH HOH . M 5 HOH B 15 315 43 HOH HOH . M 5 HOH B 16 316 45 HOH HOH . M 5 HOH B 17 317 48 HOH HOH . M 5 HOH B 18 318 50 HOH HOH . M 5 HOH B 19 319 61 HOH HOH . M 5 HOH B 20 320 66 HOH HOH . M 5 HOH B 21 321 67 HOH HOH . M 5 HOH B 22 322 77 HOH HOH . M 5 HOH B 23 323 81 HOH HOH . M 5 HOH B 24 324 86 HOH HOH . M 5 HOH B 25 325 113 HOH HOH . M 5 HOH B 26 326 114 HOH HOH . M 5 HOH B 27 327 115 HOH HOH . M 5 HOH B 28 328 142 HOH HOH . M 5 HOH B 29 329 143 HOH HOH . M 5 HOH B 30 330 144 HOH HOH . M 5 HOH B 31 331 159 HOH HOH . M 5 HOH B 32 332 161 HOH HOH . M 5 HOH B 33 333 162 HOH HOH . M 5 HOH B 34 334 163 HOH HOH . M 5 HOH B 35 335 165 HOH HOH . M 5 HOH B 36 336 177 HOH HOH . M 5 HOH B 37 337 179 HOH HOH . M 5 HOH B 38 338 180 HOH HOH . M 5 HOH B 39 339 181 HOH HOH . M 5 HOH B 40 340 185 HOH HOH . M 5 HOH B 41 341 201 HOH HOH . M 5 HOH B 42 342 206 HOH HOH . N 5 HOH C 1 301 1 HOH HOH . N 5 HOH C 2 302 7 HOH HOH . N 5 HOH C 3 303 11 HOH HOH . N 5 HOH C 4 304 21 HOH HOH . N 5 HOH C 5 305 40 HOH HOH . N 5 HOH C 6 306 41 HOH HOH . N 5 HOH C 7 307 44 HOH HOH . N 5 HOH C 8 308 53 HOH HOH . N 5 HOH C 9 309 64 HOH HOH . N 5 HOH C 10 310 75 HOH HOH . N 5 HOH C 11 311 87 HOH HOH . N 5 HOH C 12 312 92 HOH HOH . N 5 HOH C 13 313 96 HOH HOH . N 5 HOH C 14 314 117 HOH HOH . N 5 HOH C 15 315 121 HOH HOH . N 5 HOH C 16 316 122 HOH HOH . N 5 HOH C 17 317 123 HOH HOH . N 5 HOH C 18 318 124 HOH HOH . N 5 HOH C 19 319 130 HOH HOH . N 5 HOH C 20 320 133 HOH HOH . N 5 HOH C 21 321 147 HOH HOH . N 5 HOH C 22 322 148 HOH HOH . N 5 HOH C 23 323 149 HOH HOH . N 5 HOH C 24 324 167 HOH HOH . N 5 HOH C 25 325 172 HOH HOH . N 5 HOH C 26 326 174 HOH HOH . N 5 HOH C 27 327 175 HOH HOH . N 5 HOH C 28 328 188 HOH HOH . N 5 HOH C 29 329 195 HOH HOH . N 5 HOH C 30 330 196 HOH HOH . O 5 HOH D 1 301 203 HOH HOH . O 5 HOH D 2 302 4 HOH HOH . O 5 HOH D 3 303 16 HOH HOH . O 5 HOH D 4 304 28 HOH HOH . O 5 HOH D 5 305 32 HOH HOH . O 5 HOH D 6 306 42 HOH HOH . O 5 HOH D 7 307 46 HOH HOH . O 5 HOH D 8 308 51 HOH HOH . O 5 HOH D 9 309 54 HOH HOH . O 5 HOH D 10 310 69 HOH HOH . O 5 HOH D 11 311 71 HOH HOH . O 5 HOH D 12 312 74 HOH HOH . O 5 HOH D 13 313 101 HOH HOH . O 5 HOH D 14 314 103 HOH HOH . O 5 HOH D 15 315 111 HOH HOH . O 5 HOH D 16 316 118 HOH HOH . O 5 HOH D 17 317 125 HOH HOH . O 5 HOH D 18 318 150 HOH HOH . O 5 HOH D 19 319 151 HOH HOH . O 5 HOH D 20 320 152 HOH HOH . O 5 HOH D 21 321 153 HOH HOH . O 5 HOH D 22 322 154 HOH HOH . O 5 HOH D 23 323 155 HOH HOH . O 5 HOH D 24 324 168 HOH HOH . O 5 HOH D 25 325 170 HOH HOH . O 5 HOH D 26 326 171 HOH HOH . O 5 HOH D 27 327 173 HOH HOH . O 5 HOH D 28 328 198 HOH HOH . O 5 HOH D 29 329 199 HOH HOH . O 5 HOH D 30 330 202 HOH HOH . O 5 HOH D 31 331 204 HOH HOH . O 5 HOH D 32 332 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 TE4 . . . K 4 -63.783 7.176 -38.304 0.6 42.7 ? O2 TE4 202 D 1 HETATM 2 C C7 TE4 . . . K 4 -63.046 7.709 -39.114 0.6 44.57 ? C7 TE4 202 D 1 HETATM 3 O O1 TE4 . . . K 4 -63.521 7.841 -40.489 0.6 47.18 ? O1 TE4 202 D 1 HETATM 4 C C8 TE4 . . . K 4 -64.18 9.014 -40.971 0.6 48.8 ? C8 TE4 202 D 1 HETATM 5 C C9 TE4 . . . K 4 -65.22 8.645 -42.027 0.6 48.66 ? C9 TE4 202 D 1 HETATM 6 N N1 TE4 . . . K 4 -64.573 8.796 -43.327 0.6 52.41 ? N1 TE4 202 D 1 HETATM 7 C C14 TE4 . . . K 4 -63.428 7.956 -43.661 0.6 52.94 ? C14 TE4 202 D 1 HETATM 8 C C15 TE4 . . . K 4 -65.062 9.768 -44.305 0.6 52.57 ? C15 TE4 202 D 1 HETATM 9 C C4 TE4 . . . K 4 -61.686 8.211 -38.699 0.6 42.27 ? C4 TE4 202 D 1 HETATM 10 C C5 TE4 . . . K 4 -61.184 9.379 -39.251 0.6 42.38 ? C5 TE4 202 D 1 HETATM 11 C C6 TE4 . . . K 4 -59.939 9.87 -38.879 0.6 41.31 ? C6 TE4 202 D 1 HETATM 12 C C1 TE4 . . . K 4 -59.167 9.183 -37.947 0.6 40.09 ? C1 TE4 202 D 1 HETATM 13 C C2 TE4 . . . K 4 -59.667 8.014 -37.383 0.6 41.15 ? C2 TE4 202 D 1 HETATM 14 C C3 TE4 . . . K 4 -60.916 7.528 -37.762 0.6 42.88 ? C3 TE4 202 D 1 HETATM 15 N N2 TE4 . . . K 4 -57.959 9.631 -37.541 0.6 40.29 ? N2 TE4 202 D 1 HETATM 16 C C10 TE4 . . . K 4 -57.406 10.918 -37.938 0.6 39.5 ? C10 TE4 202 D 1 HETATM 17 C C11 TE4 . . . K 4 -56.806 10.907 -39.33 0.6 39.45 ? C11 TE4 202 D 1 HETATM 18 C C12 TE4 . . . K 4 -55.288 11.002 -39.304 0.6 39.25 ? C12 TE4 202 D 1 HETATM 19 C C13 TE4 . . . K 4 -54.753 11.134 -40.714 0.6 39.48 ? C13 TE4 202 D 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #