data_4OP8 # _model_server_result.job_id CMRk9Br4gHBiOYHKdRtBAw _model_server_result.datetime_utc '2024-12-03 12:10:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4op8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4OP8 # _exptl.entry_id 4OP8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.63 _cell.angle_gamma 90 _cell.entry_id 4OP8 _cell.length_a 154.36 _cell.length_b 47.04 _cell.length_c 34.92 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OP8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 1.602341 0 -34.883218 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 76 1_555 A SG CYS 98 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A OE2 GLU 12 A GLU 36 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc2 B CA CA . A CA 301 1_555 E O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc3 B CA CA . A CA 301 1_555 E O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 237 n n O1 HO1 PG4 sing 238 n n C1 C2 PG4 sing 239 n n C1 H11 PG4 sing 240 n n C1 H12 PG4 sing 241 n n C2 O2 PG4 sing 242 n n C2 H21 PG4 sing 243 n n C2 H22 PG4 sing 244 n n O2 C3 PG4 sing 245 n n C3 C4 PG4 sing 246 n n C3 H31 PG4 sing 247 n n C3 H32 PG4 sing 248 n n C4 O3 PG4 sing 249 n n C4 H41 PG4 sing 250 n n C4 H42 PG4 sing 251 n n O3 C5 PG4 sing 252 n n C5 C6 PG4 sing 253 n n C5 H51 PG4 sing 254 n n C5 H52 PG4 sing 255 n n C6 O4 PG4 sing 256 n n C6 H61 PG4 sing 257 n n C6 H62 PG4 sing 258 n n O4 C7 PG4 sing 259 n n C7 C8 PG4 sing 260 n n C7 H71 PG4 sing 261 n n C7 H72 PG4 sing 262 n n C8 O5 PG4 sing 263 n n C8 H81 PG4 sing 264 n n C8 H82 PG4 sing 265 n n O5 HO5 PG4 sing 266 n n # _atom_sites.entry_id 4OP8 _atom_sites.fract_transf_matrix[1][1] 0.006478 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000298 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028667 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 PG4 A 1 302 1 PG4 PG4 . D 4 SO4 A 1 303 1 SO4 SO4 . E 5 HOH A 1 401 1 HOH HOH . E 5 HOH A 2 402 2 HOH HOH . E 5 HOH A 3 403 3 HOH HOH . E 5 HOH A 4 404 4 HOH HOH . E 5 HOH A 5 405 5 HOH HOH . E 5 HOH A 6 406 6 HOH HOH . E 5 HOH A 7 407 7 HOH HOH . E 5 HOH A 8 408 8 HOH HOH . E 5 HOH A 9 409 9 HOH HOH . E 5 HOH A 10 410 10 HOH HOH . E 5 HOH A 11 411 11 HOH HOH . E 5 HOH A 12 412 12 HOH HOH . E 5 HOH A 13 413 13 HOH HOH . E 5 HOH A 14 414 14 HOH HOH . E 5 HOH A 15 415 15 HOH HOH . E 5 HOH A 16 416 16 HOH HOH . E 5 HOH A 17 417 17 HOH HOH . E 5 HOH A 18 418 18 HOH HOH . E 5 HOH A 19 419 19 HOH HOH . E 5 HOH A 20 420 20 HOH HOH . E 5 HOH A 21 421 21 HOH HOH . E 5 HOH A 22 422 22 HOH HOH . E 5 HOH A 23 423 23 HOH HOH . E 5 HOH A 24 424 24 HOH HOH . E 5 HOH A 25 425 25 HOH HOH . E 5 HOH A 26 426 26 HOH HOH . E 5 HOH A 27 427 27 HOH HOH . E 5 HOH A 28 428 28 HOH HOH . E 5 HOH A 29 429 29 HOH HOH . E 5 HOH A 30 430 30 HOH HOH . E 5 HOH A 31 431 32 HOH HOH . E 5 HOH A 32 432 33 HOH HOH . E 5 HOH A 33 433 34 HOH HOH . E 5 HOH A 34 434 36 HOH HOH . E 5 HOH A 35 435 37 HOH HOH . E 5 HOH A 36 436 38 HOH HOH . E 5 HOH A 37 437 39 HOH HOH . E 5 HOH A 38 438 40 HOH HOH . E 5 HOH A 39 439 41 HOH HOH . E 5 HOH A 40 440 42 HOH HOH . E 5 HOH A 41 441 43 HOH HOH . E 5 HOH A 42 442 44 HOH HOH . E 5 HOH A 43 443 45 HOH HOH . E 5 HOH A 44 444 46 HOH HOH . E 5 HOH A 45 445 47 HOH HOH . E 5 HOH A 46 446 48 HOH HOH . E 5 HOH A 47 447 49 HOH HOH . E 5 HOH A 48 448 50 HOH HOH . E 5 HOH A 49 449 51 HOH HOH . E 5 HOH A 50 450 52 HOH HOH . E 5 HOH A 51 451 53 HOH HOH . E 5 HOH A 52 452 54 HOH HOH . E 5 HOH A 53 453 55 HOH HOH . E 5 HOH A 54 454 56 HOH HOH . E 5 HOH A 55 455 57 HOH HOH . E 5 HOH A 56 456 58 HOH HOH . E 5 HOH A 57 457 59 HOH HOH . E 5 HOH A 58 458 60 HOH HOH . E 5 HOH A 59 459 61 HOH HOH . E 5 HOH A 60 460 62 HOH HOH . E 5 HOH A 61 461 63 HOH HOH . E 5 HOH A 62 462 66 HOH HOH . E 5 HOH A 63 463 71 HOH HOH . E 5 HOH A 64 464 74 HOH HOH . E 5 HOH A 65 465 76 HOH HOH . E 5 HOH A 66 466 77 HOH HOH . E 5 HOH A 67 467 78 HOH HOH . E 5 HOH A 68 468 79 HOH HOH . E 5 HOH A 69 469 81 HOH HOH . E 5 HOH A 70 470 84 HOH HOH . E 5 HOH A 71 471 85 HOH HOH . E 5 HOH A 72 472 86 HOH HOH . E 5 HOH A 73 473 87 HOH HOH . E 5 HOH A 74 474 93 HOH HOH . E 5 HOH A 75 475 94 HOH HOH . E 5 HOH A 76 476 96 HOH HOH . E 5 HOH A 77 477 97 HOH HOH . E 5 HOH A 78 478 98 HOH HOH . E 5 HOH A 79 479 99 HOH HOH . E 5 HOH A 80 480 100 HOH HOH . E 5 HOH A 81 481 102 HOH HOH . E 5 HOH A 82 482 103 HOH HOH . E 5 HOH A 83 483 106 HOH HOH . E 5 HOH A 84 484 109 HOH HOH . E 5 HOH A 85 485 110 HOH HOH . E 5 HOH A 86 486 111 HOH HOH . E 5 HOH A 87 487 115 HOH HOH . E 5 HOH A 88 488 121 HOH HOH . E 5 HOH A 89 489 122 HOH HOH . E 5 HOH A 90 490 127 HOH HOH . E 5 HOH A 91 491 134 HOH HOH . E 5 HOH A 92 492 135 HOH HOH . E 5 HOH A 93 493 136 HOH HOH . E 5 HOH A 94 494 137 HOH HOH . E 5 HOH A 95 495 139 HOH HOH . E 5 HOH A 96 496 144 HOH HOH . E 5 HOH A 97 497 147 HOH HOH . E 5 HOH A 98 498 148 HOH HOH . E 5 HOH A 99 499 156 HOH HOH . E 5 HOH A 100 500 157 HOH HOH . E 5 HOH A 101 501 158 HOH HOH . E 5 HOH A 102 502 159 HOH HOH . E 5 HOH A 103 503 163 HOH HOH . E 5 HOH A 104 504 165 HOH HOH . E 5 HOH A 105 505 166 HOH HOH . E 5 HOH A 106 506 167 HOH HOH . E 5 HOH A 107 507 168 HOH HOH . E 5 HOH A 108 508 170 HOH HOH . E 5 HOH A 109 509 171 HOH HOH . E 5 HOH A 110 510 172 HOH HOH . E 5 HOH A 111 511 173 HOH HOH . E 5 HOH A 112 512 175 HOH HOH . E 5 HOH A 113 513 177 HOH HOH . E 5 HOH A 114 514 181 HOH HOH . E 5 HOH A 115 515 187 HOH HOH . E 5 HOH A 116 516 193 HOH HOH . E 5 HOH A 117 517 195 HOH HOH . E 5 HOH A 118 518 198 HOH HOH . E 5 HOH A 119 519 200 HOH HOH . E 5 HOH A 120 520 201 HOH HOH . E 5 HOH A 121 521 202 HOH HOH . E 5 HOH A 122 522 204 HOH HOH . E 5 HOH A 123 523 205 HOH HOH . E 5 HOH A 124 524 208 HOH HOH . E 5 HOH A 125 525 210 HOH HOH . E 5 HOH A 126 526 211 HOH HOH . E 5 HOH A 127 527 213 HOH HOH . E 5 HOH A 128 528 221 HOH HOH . E 5 HOH A 129 529 223 HOH HOH . E 5 HOH A 130 530 225 HOH HOH . E 5 HOH A 131 531 233 HOH HOH . E 5 HOH A 132 532 239 HOH HOH . E 5 HOH A 133 533 243 HOH HOH . E 5 HOH A 134 534 244 HOH HOH . E 5 HOH A 135 535 245 HOH HOH . E 5 HOH A 136 536 246 HOH HOH . E 5 HOH A 137 537 248 HOH HOH . E 5 HOH A 138 538 258 HOH HOH . E 5 HOH A 139 539 266 HOH HOH . E 5 HOH A 140 540 267 HOH HOH . E 5 HOH A 141 541 269 HOH HOH . E 5 HOH A 142 542 270 HOH HOH . E 5 HOH A 143 543 271 HOH HOH . E 5 HOH A 144 544 273 HOH HOH . E 5 HOH A 145 545 274 HOH HOH . E 5 HOH A 146 546 275 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . C 3 21.404 7.853 -3.055 0.7 44.01 ? O1 PG4 302 A 1 HETATM 2 C C1 PG4 . . . C 3 21.629 7.94 -4.466 0.7 39.75 ? C1 PG4 302 A 1 HETATM 3 C C2 PG4 . . . C 3 22.572 9.099 -4.766 0.7 41.97 ? C2 PG4 302 A 1 HETATM 4 O O2 PG4 . . . C 3 23.756 8.609 -5.394 0.7 41.61 ? O2 PG4 302 A 1 HETATM 5 C C3 PG4 . . . C 3 24.82 9.557 -5.336 0.7 38.84 ? C3 PG4 302 A 1 HETATM 6 C C4 PG4 . . . C 3 24.923 10.136 -3.93 0.7 37.5 ? C4 PG4 302 A 1 HETATM 7 O O3 PG4 . . . C 3 26.118 9.677 -3.303 0.7 34.37 ? O3 PG4 302 A 1 HETATM 8 C C5 PG4 . . . C 3 26.497 10.522 -2.219 0.7 32.93 ? C5 PG4 302 A 1 HETATM 9 C C6 PG4 . . . C 3 27.598 9.856 -1.403 0.7 33.66 ? C6 PG4 302 A 1 HETATM 10 O O4 PG4 . . . C 3 27.487 8.439 -1.51 0.7 36.52 ? O4 PG4 302 A 1 HETATM 11 C C7 PG4 . . . C 3 27.517 7.804 -0.233 0.7 38.66 ? C7 PG4 302 A 1 HETATM 12 C C8 PG4 . . . C 3 26.22 7.035 -0.011 0.7 38.37 ? C8 PG4 302 A 1 HETATM 13 O O5 PG4 . . . C 3 26.447 5.634 -0.199 0.7 37.32 ? O5 PG4 302 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #