data_4OPQ # _model_server_result.job_id qnIyRqpFuBElZ1eNaMX8kA _model_server_result.datetime_utc '2024-11-02 10:21:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4opq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4OPQ # _exptl.entry_id 4OPQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.82 _cell.angle_gamma 90 _cell.entry_id 4OPQ _cell.length_a 154.9 _cell.length_b 47.2 _cell.length_c 34.89 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OPQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -1.716533 0 34.847749 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 76 1_555 A SG CYS 98 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc1 A OE2 GLU 12 A GLU 36 1_555 B CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc2 B CA CA . A CA 301 1_555 G O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc3 B CA CA . A CA 301 1_555 G O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4OPQ _atom_sites.fract_transf_matrix[1][1] 0.006456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000318 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021186 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028696 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 301 1 CA CA . C 3 PG4 A 1 302 1 PG4 PG4 . D 4 PEG A 1 303 1 PEG PEG . E 4 PEG A 1 304 1 PEG PEG . F 5 SO4 A 1 305 305 SO4 SO4 . G 6 HOH A 1 401 1 HOH HOH . G 6 HOH A 2 402 2 HOH HOH . G 6 HOH A 3 403 3 HOH HOH . G 6 HOH A 4 404 4 HOH HOH . G 6 HOH A 5 405 6 HOH HOH . G 6 HOH A 6 406 7 HOH HOH . G 6 HOH A 7 407 8 HOH HOH . G 6 HOH A 8 408 9 HOH HOH . G 6 HOH A 9 409 10 HOH HOH . G 6 HOH A 10 410 11 HOH HOH . G 6 HOH A 11 411 12 HOH HOH . G 6 HOH A 12 412 13 HOH HOH . G 6 HOH A 13 413 15 HOH HOH . G 6 HOH A 14 414 16 HOH HOH . G 6 HOH A 15 415 17 HOH HOH . G 6 HOH A 16 416 18 HOH HOH . G 6 HOH A 17 417 19 HOH HOH . G 6 HOH A 18 418 20 HOH HOH . G 6 HOH A 19 419 21 HOH HOH . G 6 HOH A 20 420 22 HOH HOH . G 6 HOH A 21 421 23 HOH HOH . G 6 HOH A 22 422 24 HOH HOH . G 6 HOH A 23 423 25 HOH HOH . G 6 HOH A 24 424 26 HOH HOH . G 6 HOH A 25 425 27 HOH HOH . G 6 HOH A 26 426 28 HOH HOH . G 6 HOH A 27 427 29 HOH HOH . G 6 HOH A 28 428 30 HOH HOH . G 6 HOH A 29 429 32 HOH HOH . G 6 HOH A 30 430 34 HOH HOH . G 6 HOH A 31 431 35 HOH HOH . G 6 HOH A 32 432 36 HOH HOH . G 6 HOH A 33 433 37 HOH HOH . G 6 HOH A 34 434 38 HOH HOH . G 6 HOH A 35 435 39 HOH HOH . G 6 HOH A 36 436 40 HOH HOH . G 6 HOH A 37 437 41 HOH HOH . G 6 HOH A 38 438 42 HOH HOH . G 6 HOH A 39 439 44 HOH HOH . G 6 HOH A 40 440 45 HOH HOH . G 6 HOH A 41 441 46 HOH HOH . G 6 HOH A 42 442 47 HOH HOH . G 6 HOH A 43 443 49 HOH HOH . G 6 HOH A 44 444 50 HOH HOH . G 6 HOH A 45 445 51 HOH HOH . G 6 HOH A 46 446 53 HOH HOH . G 6 HOH A 47 447 55 HOH HOH . G 6 HOH A 48 448 57 HOH HOH . G 6 HOH A 49 449 58 HOH HOH . G 6 HOH A 50 450 60 HOH HOH . G 6 HOH A 51 451 61 HOH HOH . G 6 HOH A 52 452 62 HOH HOH . G 6 HOH A 53 453 63 HOH HOH . G 6 HOH A 54 454 64 HOH HOH . G 6 HOH A 55 455 65 HOH HOH . G 6 HOH A 56 456 66 HOH HOH . G 6 HOH A 57 457 68 HOH HOH . G 6 HOH A 58 458 70 HOH HOH . G 6 HOH A 59 459 71 HOH HOH . G 6 HOH A 60 460 72 HOH HOH . G 6 HOH A 61 461 73 HOH HOH . G 6 HOH A 62 462 74 HOH HOH . G 6 HOH A 63 463 75 HOH HOH . G 6 HOH A 64 464 76 HOH HOH . G 6 HOH A 65 465 77 HOH HOH . G 6 HOH A 66 466 78 HOH HOH . G 6 HOH A 67 467 79 HOH HOH . G 6 HOH A 68 468 81 HOH HOH . G 6 HOH A 69 469 82 HOH HOH . G 6 HOH A 70 470 83 HOH HOH . G 6 HOH A 71 471 85 HOH HOH . G 6 HOH A 72 472 86 HOH HOH . G 6 HOH A 73 473 87 HOH HOH . G 6 HOH A 74 474 88 HOH HOH . G 6 HOH A 75 475 90 HOH HOH . G 6 HOH A 76 476 91 HOH HOH . G 6 HOH A 77 477 95 HOH HOH . G 6 HOH A 78 478 96 HOH HOH . G 6 HOH A 79 479 100 HOH HOH . G 6 HOH A 80 480 103 HOH HOH . G 6 HOH A 81 481 107 HOH HOH . G 6 HOH A 82 482 111 HOH HOH . G 6 HOH A 83 483 112 HOH HOH . G 6 HOH A 84 484 113 HOH HOH . G 6 HOH A 85 485 121 HOH HOH . G 6 HOH A 86 486 124 HOH HOH . G 6 HOH A 87 487 125 HOH HOH . G 6 HOH A 88 488 126 HOH HOH . G 6 HOH A 89 489 128 HOH HOH . G 6 HOH A 90 490 133 HOH HOH . G 6 HOH A 91 491 135 HOH HOH . G 6 HOH A 92 492 136 HOH HOH . G 6 HOH A 93 493 137 HOH HOH . G 6 HOH A 94 494 143 HOH HOH . G 6 HOH A 95 495 144 HOH HOH . G 6 HOH A 96 496 146 HOH HOH . G 6 HOH A 97 497 147 HOH HOH . G 6 HOH A 98 498 150 HOH HOH . G 6 HOH A 99 499 151 HOH HOH . G 6 HOH A 100 500 152 HOH HOH . G 6 HOH A 101 501 154 HOH HOH . G 6 HOH A 102 502 163 HOH HOH . G 6 HOH A 103 503 164 HOH HOH . G 6 HOH A 104 504 165 HOH HOH . G 6 HOH A 105 505 166 HOH HOH . G 6 HOH A 106 506 168 HOH HOH . G 6 HOH A 107 507 176 HOH HOH . G 6 HOH A 108 508 178 HOH HOH . G 6 HOH A 109 509 181 HOH HOH . G 6 HOH A 110 510 182 HOH HOH . G 6 HOH A 111 511 185 HOH HOH . G 6 HOH A 112 512 186 HOH HOH . G 6 HOH A 113 513 187 HOH HOH . G 6 HOH A 114 514 189 HOH HOH . G 6 HOH A 115 515 192 HOH HOH . G 6 HOH A 116 516 193 HOH HOH . G 6 HOH A 117 517 194 HOH HOH . G 6 HOH A 118 518 195 HOH HOH . G 6 HOH A 119 519 196 HOH HOH . G 6 HOH A 120 520 197 HOH HOH . G 6 HOH A 121 521 198 HOH HOH . G 6 HOH A 122 522 199 HOH HOH . G 6 HOH A 123 523 200 HOH HOH . G 6 HOH A 124 524 201 HOH HOH . G 6 HOH A 125 525 202 HOH HOH . G 6 HOH A 126 526 203 HOH HOH . G 6 HOH A 127 527 204 HOH HOH . G 6 HOH A 128 528 205 HOH HOH . G 6 HOH A 129 529 206 HOH HOH . G 6 HOH A 130 530 207 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -0.971 _atom_site.Cartn_y -10.51 _atom_site.Cartn_z 17.834 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 11.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #