data_4OQ2 # _model_server_result.job_id RufYuzaypk3qh9sUy_OQIA _model_server_result.datetime_utc '2024-12-21 15:56:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oq2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 4OQ2 # _exptl.entry_id 4OQ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OQ2 _cell.length_a 61.99 _cell.length_b 61.99 _cell.length_c 210.99 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OQ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 10 A PHE 0 1_555 A N MSE 11 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 11 A MSE 1 1_555 A N SER 12 A SER 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale3 A C TYR 164 A TYR 154 1_555 A N MSE 165 A MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 A C MSE 165 A MSE 155 1_555 A N ALA 166 A ALA 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 A C VAL 212 A VAL 202 1_555 A N MSE 213 A MSE 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale6 A C MSE 213 A MSE 203 1_555 A N VAL 214 A VAL 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 A C VAL 256 A VAL 246 1_555 A N MSE 257 A MSE 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 A C MSE 257 A MSE 247 1_555 A N ALA 258 A ALA 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 4OQ2 _atom_sites.fract_transf_matrix[1][1] 0.016132 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE A 1 400 400 EPE EPE . C 3 HOH A 1 501 1 HOH HOH . C 3 HOH A 2 502 2 HOH HOH . C 3 HOH A 3 503 3 HOH HOH . C 3 HOH A 4 504 4 HOH HOH . C 3 HOH A 5 505 5 HOH HOH . C 3 HOH A 6 506 6 HOH HOH . C 3 HOH A 7 507 7 HOH HOH . C 3 HOH A 8 508 8 HOH HOH . C 3 HOH A 9 509 9 HOH HOH . C 3 HOH A 10 510 10 HOH HOH . C 3 HOH A 11 511 11 HOH HOH . C 3 HOH A 12 512 12 HOH HOH . C 3 HOH A 13 513 13 HOH HOH . C 3 HOH A 14 514 14 HOH HOH . C 3 HOH A 15 515 15 HOH HOH . C 3 HOH A 16 516 16 HOH HOH . C 3 HOH A 17 517 18 HOH HOH . C 3 HOH A 18 518 19 HOH HOH . C 3 HOH A 19 519 20 HOH HOH . C 3 HOH A 20 520 21 HOH HOH . C 3 HOH A 21 521 22 HOH HOH . C 3 HOH A 22 522 23 HOH HOH . C 3 HOH A 23 523 24 HOH HOH . C 3 HOH A 24 524 25 HOH HOH . C 3 HOH A 25 525 26 HOH HOH . C 3 HOH A 26 526 27 HOH HOH . C 3 HOH A 27 527 28 HOH HOH . C 3 HOH A 28 528 30 HOH HOH . C 3 HOH A 29 529 31 HOH HOH . C 3 HOH A 30 530 32 HOH HOH . C 3 HOH A 31 531 33 HOH HOH . C 3 HOH A 32 532 34 HOH HOH . C 3 HOH A 33 533 35 HOH HOH . C 3 HOH A 34 534 36 HOH HOH . C 3 HOH A 35 535 37 HOH HOH . C 3 HOH A 36 536 38 HOH HOH . C 3 HOH A 37 537 39 HOH HOH . C 3 HOH A 38 538 40 HOH HOH . C 3 HOH A 39 539 41 HOH HOH . C 3 HOH A 40 540 42 HOH HOH . C 3 HOH A 41 541 43 HOH HOH . C 3 HOH A 42 542 44 HOH HOH . C 3 HOH A 43 543 45 HOH HOH . C 3 HOH A 44 544 46 HOH HOH . C 3 HOH A 45 545 48 HOH HOH . C 3 HOH A 46 546 49 HOH HOH . C 3 HOH A 47 547 50 HOH HOH . C 3 HOH A 48 548 52 HOH HOH . C 3 HOH A 49 549 53 HOH HOH . C 3 HOH A 50 550 54 HOH HOH . C 3 HOH A 51 551 55 HOH HOH . C 3 HOH A 52 552 56 HOH HOH . C 3 HOH A 53 553 57 HOH HOH . C 3 HOH A 54 554 59 HOH HOH . C 3 HOH A 55 555 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . B 2 43.771 13.441 86.238 1 67.33 ? N1 EPE 400 A 1 HETATM 2 C C2 EPE . . . B 2 43.308 14.427 85.255 1 69.23 ? C2 EPE 400 A 1 HETATM 3 C C3 EPE . . . B 2 43.961 15.75 85.525 1 68.71 ? C3 EPE 400 A 1 HETATM 4 N N4 EPE . . . B 2 45.4 15.604 85.588 1 71.3 ? N4 EPE 400 A 1 HETATM 5 C C5 EPE . . . B 2 45.943 14.264 85.343 1 68.73 ? C5 EPE 400 A 1 HETATM 6 C C6 EPE . . . B 2 45.128 13.059 85.838 1 68 ? C6 EPE 400 A 1 HETATM 7 C C7 EPE . . . B 2 45.927 16.586 84.657 1 74.09 ? C7 EPE 400 A 1 HETATM 8 C C8 EPE . . . B 2 47.028 16.061 83.719 1 76.5 ? C8 EPE 400 A 1 HETATM 9 O O8 EPE . . . B 2 47.857 17.157 83.349 1 77.09 ? O8 EPE 400 A 1 HETATM 10 C C9 EPE . . . B 2 42.798 12.302 86.294 1 65.45 ? C9 EPE 400 A 1 HETATM 11 C C10 EPE . . . B 2 42.031 12.127 84.977 1 64.08 ? C10 EPE 400 A 1 HETATM 12 S S EPE . . . B 2 40.331 11.432 84.953 1 64.88 ? S EPE 400 A 1 HETATM 13 O O1S EPE . . . B 2 39.291 12.358 85.459 1 59.56 ? O1S EPE 400 A 1 HETATM 14 O O2S EPE . . . B 2 40.121 11.155 83.532 1 64.28 ? O2S EPE 400 A 1 HETATM 15 O O3S EPE . . . B 2 40.218 10.141 85.638 1 62.81 ? O3S EPE 400 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #