data_4OQD # _model_server_result.job_id K5bgjW23johNUB7kUg4uJg _model_server_result.datetime_utc '2024-11-29 08:13:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oqd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 4OQD # _exptl.entry_id 4OQD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 575.398 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TDP-3,6-dideoxy-3-N,N-dimethylglucose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.1 _cell.angle_gamma 90 _cell.entry_id 4OQD _cell.length_a 73.532 _cell.length_b 92.05 _cell.length_c 80.177 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OQD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C18 H31 N3 O14 P2' _chem_comp.formula_weight 575.398 _chem_comp.id QDM _chem_comp.mon_nstd_flag . _chem_comp.name TDP-3,6-dideoxy-3-N,N-dimethylglucose _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2M N3Q QDM sing 277 n n O4Q C4Q QDM sing 278 n n C1M N3Q QDM sing 279 n n N3Q C3Q QDM sing 280 n n C4Q C3Q QDM sing 281 n n C4Q C5Q QDM sing 282 n n C3Q C2Q QDM sing 283 n n C6Q C5Q QDM sing 284 n n C5Q O5Q QDM sing 285 n n C2Q O2Q QDM sing 286 n n C2Q C1Q QDM sing 287 n n O5Q C1Q QDM sing 288 n n C1Q O3B QDM sing 289 n n O3B PB QDM sing 290 n n O2B PB QDM doub 291 n n PB O1B QDM sing 292 n n PB O3A QDM sing 293 n n O3A PA QDM sing 294 n n O2A PA QDM doub 295 n n PA O1A QDM sing 296 n n PA O5' QDM sing 297 n n O5' C5' QDM sing 298 n n O3' C3' QDM sing 299 n n C4' C5' QDM sing 300 n n C4' C3' QDM sing 301 n n C4' O4' QDM sing 302 n n C3' C2' QDM sing 303 n n O4' C1' QDM sing 304 n n C1' C2' QDM sing 305 n n C1' N1 QDM sing 306 n n N1 C6 QDM sing 307 n n N1 C2 QDM sing 308 n n O2 C2 QDM doub 309 n n C6 C5 QDM doub 310 n n C2 N3 QDM sing 311 n n C5 C5M QDM sing 312 n n C5 C4 QDM sing 313 n n N3 C4 QDM sing 314 n n C4 O4 QDM doub 315 n n O1A H1 QDM sing 316 n n O1B H2 QDM sing 317 n n C1Q H3 QDM sing 318 n n C2Q H4 QDM sing 319 n n O2Q H5 QDM sing 320 n n C3Q H6 QDM sing 321 n n C2M H8 QDM sing 322 n n C2M H9 QDM sing 323 n n C2M H10 QDM sing 324 n n C1M H11 QDM sing 325 n n C1M H12 QDM sing 326 n n C1M H13 QDM sing 327 n n C4Q H14 QDM sing 328 n n O4Q H15 QDM sing 329 n n C5Q H16 QDM sing 330 n n C6Q H17 QDM sing 331 n n C6Q H18 QDM sing 332 n n C6Q H19 QDM sing 333 n n C5' H20 QDM sing 334 n n C5' H21 QDM sing 335 n n C4' H22 QDM sing 336 n n C3' H23 QDM sing 337 n n O3' H24 QDM sing 338 n n C2' H25 QDM sing 339 n n C2' H26 QDM sing 340 n n C1' H27 QDM sing 341 n n C6 H28 QDM sing 342 n n C5M H29 QDM sing 343 n n C5M H30 QDM sing 344 n n C5M H31 QDM sing 345 n n N3 H32 QDM sing 346 n n # _atom_sites.entry_id 4OQD _atom_sites.fract_transf_matrix[1][1] 0.0136 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003926 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010864 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012982 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SAH A 1 300 300 SAH SAH . F 3 QDM A 1 301 301 QDM DMQ . G 2 SAH B 1 300 300 SAH SAH . H 3 QDM B 1 301 301 QDM DMQ . I 2 SAH C 1 300 300 SAH SAH . J 3 QDM C 1 301 301 QDM DMQ . K 2 SAH D 1 300 300 SAH SAH . L 3 QDM D 1 301 301 QDM DMQ . M 4 HOH A 1 401 2 HOH HOH . M 4 HOH A 2 402 3 HOH HOH . M 4 HOH A 3 403 4 HOH HOH . M 4 HOH A 4 404 5 HOH HOH . M 4 HOH A 5 405 6 HOH HOH . M 4 HOH A 6 406 7 HOH HOH . M 4 HOH A 7 407 8 HOH HOH . M 4 HOH A 8 408 9 HOH HOH . M 4 HOH A 9 409 10 HOH HOH . M 4 HOH A 10 410 11 HOH HOH . M 4 HOH A 11 411 12 HOH HOH . M 4 HOH A 12 412 13 HOH HOH . M 4 HOH A 13 413 14 HOH HOH . M 4 HOH A 14 414 15 HOH HOH . M 4 HOH A 15 415 16 HOH HOH . M 4 HOH A 16 416 17 HOH HOH . M 4 HOH A 17 417 18 HOH HOH . M 4 HOH A 18 418 19 HOH HOH . M 4 HOH A 19 419 20 HOH HOH . M 4 HOH A 20 420 21 HOH HOH . M 4 HOH A 21 421 22 HOH HOH . M 4 HOH A 22 422 23 HOH HOH . M 4 HOH A 23 423 24 HOH HOH . M 4 HOH A 24 424 25 HOH HOH . M 4 HOH A 25 425 26 HOH HOH . M 4 HOH A 26 426 27 HOH HOH . M 4 HOH A 27 427 28 HOH HOH . M 4 HOH A 28 428 29 HOH HOH . M 4 HOH A 29 429 30 HOH HOH . M 4 HOH A 30 430 31 HOH HOH . M 4 HOH A 31 431 32 HOH HOH . M 4 HOH A 32 432 33 HOH HOH . M 4 HOH A 33 433 34 HOH HOH . M 4 HOH A 34 434 35 HOH HOH . M 4 HOH A 35 435 37 HOH HOH . M 4 HOH A 36 436 38 HOH HOH . M 4 HOH A 37 437 39 HOH HOH . M 4 HOH A 38 438 40 HOH HOH . M 4 HOH A 39 439 41 HOH HOH . M 4 HOH A 40 440 42 HOH HOH . M 4 HOH A 41 441 43 HOH HOH . M 4 HOH A 42 442 44 HOH HOH . M 4 HOH A 43 443 45 HOH HOH . M 4 HOH A 44 444 46 HOH HOH . M 4 HOH A 45 445 47 HOH HOH . M 4 HOH A 46 446 48 HOH HOH . M 4 HOH A 47 447 49 HOH HOH . M 4 HOH A 48 448 50 HOH HOH . M 4 HOH A 49 449 51 HOH HOH . M 4 HOH A 50 450 53 HOH HOH . M 4 HOH A 51 451 55 HOH HOH . M 4 HOH A 52 452 56 HOH HOH . M 4 HOH A 53 453 57 HOH HOH . M 4 HOH A 54 454 58 HOH HOH . M 4 HOH A 55 455 59 HOH HOH . M 4 HOH A 56 456 60 HOH HOH . M 4 HOH A 57 457 61 HOH HOH . M 4 HOH A 58 458 62 HOH HOH . M 4 HOH A 59 459 63 HOH HOH . M 4 HOH A 60 460 64 HOH HOH . M 4 HOH A 61 461 111 HOH HOH . M 4 HOH A 62 462 180 HOH HOH . M 4 HOH A 63 463 185 HOH HOH . M 4 HOH A 64 464 187 HOH HOH . M 4 HOH A 65 465 189 HOH HOH . M 4 HOH A 66 466 190 HOH HOH . M 4 HOH A 67 467 191 HOH HOH . M 4 HOH A 68 468 194 HOH HOH . M 4 HOH A 69 469 199 HOH HOH . M 4 HOH A 70 470 203 HOH HOH . M 4 HOH A 71 471 205 HOH HOH . M 4 HOH A 72 472 215 HOH HOH . M 4 HOH A 73 473 217 HOH HOH . M 4 HOH A 74 474 218 HOH HOH . M 4 HOH A 75 475 220 HOH HOH . M 4 HOH A 76 476 228 HOH HOH . M 4 HOH A 77 477 231 HOH HOH . M 4 HOH A 78 478 235 HOH HOH . M 4 HOH A 79 479 241 HOH HOH . M 4 HOH A 80 480 248 HOH HOH . M 4 HOH A 81 481 250 HOH HOH . M 4 HOH A 82 482 251 HOH HOH . M 4 HOH A 83 483 255 HOH HOH . M 4 HOH A 84 484 258 HOH HOH . M 4 HOH A 85 485 260 HOH HOH . M 4 HOH A 86 486 261 HOH HOH . M 4 HOH A 87 487 265 HOH HOH . M 4 HOH A 88 488 266 HOH HOH . M 4 HOH A 89 489 267 HOH HOH . M 4 HOH A 90 490 270 HOH HOH . M 4 HOH A 91 491 272 HOH HOH . M 4 HOH A 92 492 273 HOH HOH . M 4 HOH A 93 493 290 HOH HOH . M 4 HOH A 94 494 291 HOH HOH . M 4 HOH A 95 495 294 HOH HOH . M 4 HOH A 96 496 298 HOH HOH . M 4 HOH A 97 497 308 HOH HOH . M 4 HOH A 98 498 312 HOH HOH . M 4 HOH A 99 499 314 HOH HOH . M 4 HOH A 100 500 315 HOH HOH . M 4 HOH A 101 501 321 HOH HOH . M 4 HOH A 102 502 324 HOH HOH . M 4 HOH A 103 503 325 HOH HOH . M 4 HOH A 104 504 338 HOH HOH . M 4 HOH A 105 505 341 HOH HOH . M 4 HOH A 106 506 352 HOH HOH . M 4 HOH A 107 507 355 HOH HOH . M 4 HOH A 108 508 356 HOH HOH . M 4 HOH A 109 509 357 HOH HOH . M 4 HOH A 110 510 358 HOH HOH . M 4 HOH A 111 511 359 HOH HOH . M 4 HOH A 112 512 360 HOH HOH . M 4 HOH A 113 513 361 HOH HOH . M 4 HOH A 114 514 362 HOH HOH . M 4 HOH A 115 515 364 HOH HOH . M 4 HOH A 116 516 365 HOH HOH . M 4 HOH A 117 517 366 HOH HOH . M 4 HOH A 118 518 367 HOH HOH . M 4 HOH A 119 519 368 HOH HOH . M 4 HOH A 120 520 369 HOH HOH . M 4 HOH A 121 521 370 HOH HOH . M 4 HOH A 122 522 371 HOH HOH . M 4 HOH A 123 523 372 HOH HOH . M 4 HOH A 124 524 373 HOH HOH . M 4 HOH A 125 525 374 HOH HOH . M 4 HOH A 126 526 375 HOH HOH . M 4 HOH A 127 527 376 HOH HOH . M 4 HOH A 128 528 377 HOH HOH . M 4 HOH A 129 529 378 HOH HOH . M 4 HOH A 130 530 379 HOH HOH . M 4 HOH A 131 531 429 HOH HOH . M 4 HOH A 132 532 432 HOH HOH . M 4 HOH A 133 533 433 HOH HOH . M 4 HOH A 134 534 435 HOH HOH . M 4 HOH A 135 535 438 HOH HOH . M 4 HOH A 136 536 441 HOH HOH . M 4 HOH A 137 537 442 HOH HOH . M 4 HOH A 138 538 443 HOH HOH . M 4 HOH A 139 539 444 HOH HOH . M 4 HOH A 140 540 462 HOH HOH . M 4 HOH A 141 541 463 HOH HOH . M 4 HOH A 142 542 465 HOH HOH . M 4 HOH A 143 543 466 HOH HOH . M 4 HOH A 144 544 467 HOH HOH . M 4 HOH A 145 545 468 HOH HOH . M 4 HOH A 146 546 469 HOH HOH . M 4 HOH A 147 547 470 HOH HOH . M 4 HOH A 148 548 471 HOH HOH . M 4 HOH A 149 549 472 HOH HOH . M 4 HOH A 150 550 473 HOH HOH . M 4 HOH A 151 551 474 HOH HOH . M 4 HOH A 152 552 475 HOH HOH . M 4 HOH A 153 553 476 HOH HOH . M 4 HOH A 154 554 477 HOH HOH . M 4 HOH A 155 555 478 HOH HOH . M 4 HOH A 156 556 479 HOH HOH . M 4 HOH A 157 557 480 HOH HOH . M 4 HOH A 158 558 481 HOH HOH . M 4 HOH A 159 559 482 HOH HOH . M 4 HOH A 160 560 483 HOH HOH . M 4 HOH A 161 561 484 HOH HOH . M 4 HOH A 162 562 485 HOH HOH . M 4 HOH A 163 563 486 HOH HOH . M 4 HOH A 164 564 487 HOH HOH . M 4 HOH A 165 565 488 HOH HOH . M 4 HOH A 166 566 489 HOH HOH . M 4 HOH A 167 567 490 HOH HOH . M 4 HOH A 168 568 491 HOH HOH . M 4 HOH A 169 569 492 HOH HOH . M 4 HOH A 170 570 493 HOH HOH . M 4 HOH A 171 571 494 HOH HOH . M 4 HOH A 172 572 495 HOH HOH . M 4 HOH A 173 573 496 HOH HOH . M 4 HOH A 174 574 497 HOH HOH . M 4 HOH A 175 575 498 HOH HOH . M 4 HOH A 176 576 499 HOH HOH . M 4 HOH A 177 577 500 HOH HOH . M 4 HOH A 178 578 501 HOH HOH . M 4 HOH A 179 579 502 HOH HOH . M 4 HOH A 180 580 506 HOH HOH . M 4 HOH A 181 581 507 HOH HOH . M 4 HOH A 182 582 510 HOH HOH . M 4 HOH A 183 583 511 HOH HOH . M 4 HOH A 184 584 512 HOH HOH . M 4 HOH A 185 585 513 HOH HOH . M 4 HOH A 186 586 514 HOH HOH . M 4 HOH A 187 587 642 HOH HOH . M 4 HOH A 188 588 643 HOH HOH . M 4 HOH A 189 589 644 HOH HOH . M 4 HOH A 190 590 645 HOH HOH . M 4 HOH A 191 591 661 HOH HOH . M 4 HOH A 192 592 662 HOH HOH . M 4 HOH A 193 593 663 HOH HOH . M 4 HOH A 194 594 664 HOH HOH . M 4 HOH A 195 595 665 HOH HOH . N 4 HOH B 1 401 52 HOH HOH . N 4 HOH B 2 402 54 HOH HOH . N 4 HOH B 3 403 65 HOH HOH . N 4 HOH B 4 404 66 HOH HOH . N 4 HOH B 5 405 67 HOH HOH . N 4 HOH B 6 406 68 HOH HOH . N 4 HOH B 7 407 69 HOH HOH . N 4 HOH B 8 408 70 HOH HOH . N 4 HOH B 9 409 71 HOH HOH . N 4 HOH B 10 410 72 HOH HOH . N 4 HOH B 11 411 73 HOH HOH . N 4 HOH B 12 412 74 HOH HOH . N 4 HOH B 13 413 75 HOH HOH . N 4 HOH B 14 414 76 HOH HOH . N 4 HOH B 15 415 77 HOH HOH . N 4 HOH B 16 416 78 HOH HOH . N 4 HOH B 17 417 79 HOH HOH . N 4 HOH B 18 418 80 HOH HOH . N 4 HOH B 19 419 81 HOH HOH . N 4 HOH B 20 420 82 HOH HOH . N 4 HOH B 21 421 84 HOH HOH . N 4 HOH B 22 422 85 HOH HOH . N 4 HOH B 23 423 86 HOH HOH . N 4 HOH B 24 424 87 HOH HOH . N 4 HOH B 25 425 88 HOH HOH . N 4 HOH B 26 426 89 HOH HOH . N 4 HOH B 27 427 90 HOH HOH . N 4 HOH B 28 428 91 HOH HOH . N 4 HOH B 29 429 183 HOH HOH . N 4 HOH B 30 430 204 HOH HOH . N 4 HOH B 31 431 209 HOH HOH . N 4 HOH B 32 432 221 HOH HOH . N 4 HOH B 33 433 226 HOH HOH . N 4 HOH B 34 434 232 HOH HOH . N 4 HOH B 35 435 237 HOH HOH . N 4 HOH B 36 436 240 HOH HOH . N 4 HOH B 37 437 247 HOH HOH . N 4 HOH B 38 438 249 HOH HOH . N 4 HOH B 39 439 263 HOH HOH . N 4 HOH B 40 440 278 HOH HOH . N 4 HOH B 41 441 279 HOH HOH . N 4 HOH B 42 442 281 HOH HOH . N 4 HOH B 43 443 285 HOH HOH . N 4 HOH B 44 444 288 HOH HOH . N 4 HOH B 45 445 293 HOH HOH . N 4 HOH B 46 446 296 HOH HOH . N 4 HOH B 47 447 305 HOH HOH . N 4 HOH B 48 448 307 HOH HOH . N 4 HOH B 49 449 313 HOH HOH . N 4 HOH B 50 450 319 HOH HOH . N 4 HOH B 51 451 329 HOH HOH . N 4 HOH B 52 452 332 HOH HOH . N 4 HOH B 53 453 333 HOH HOH . N 4 HOH B 54 454 337 HOH HOH . N 4 HOH B 55 455 342 HOH HOH . N 4 HOH B 56 456 347 HOH HOH . N 4 HOH B 57 457 349 HOH HOH . N 4 HOH B 58 458 380 HOH HOH . N 4 HOH B 59 459 381 HOH HOH . N 4 HOH B 60 460 382 HOH HOH . N 4 HOH B 61 461 383 HOH HOH . N 4 HOH B 62 462 384 HOH HOH . N 4 HOH B 63 463 385 HOH HOH . N 4 HOH B 64 464 386 HOH HOH . N 4 HOH B 65 465 387 HOH HOH . N 4 HOH B 66 466 390 HOH HOH . N 4 HOH B 67 467 437 HOH HOH . N 4 HOH B 68 468 445 HOH HOH . N 4 HOH B 69 469 446 HOH HOH . N 4 HOH B 70 470 447 HOH HOH . N 4 HOH B 71 471 503 HOH HOH . N 4 HOH B 72 472 504 HOH HOH . N 4 HOH B 73 473 505 HOH HOH . N 4 HOH B 74 474 515 HOH HOH . N 4 HOH B 75 475 516 HOH HOH . N 4 HOH B 76 476 517 HOH HOH . N 4 HOH B 77 477 518 HOH HOH . N 4 HOH B 78 478 519 HOH HOH . N 4 HOH B 79 479 520 HOH HOH . N 4 HOH B 80 480 521 HOH HOH . N 4 HOH B 81 481 522 HOH HOH . N 4 HOH B 82 482 523 HOH HOH . N 4 HOH B 83 483 524 HOH HOH . N 4 HOH B 84 484 525 HOH HOH . N 4 HOH B 85 485 526 HOH HOH . N 4 HOH B 86 486 527 HOH HOH . N 4 HOH B 87 487 528 HOH HOH . N 4 HOH B 88 488 529 HOH HOH . N 4 HOH B 89 489 530 HOH HOH . N 4 HOH B 90 490 531 HOH HOH . N 4 HOH B 91 491 532 HOH HOH . N 4 HOH B 92 492 537 HOH HOH . N 4 HOH B 93 493 539 HOH HOH . N 4 HOH B 94 494 540 HOH HOH . N 4 HOH B 95 495 541 HOH HOH . N 4 HOH B 96 496 542 HOH HOH . N 4 HOH B 97 497 544 HOH HOH . N 4 HOH B 98 498 545 HOH HOH . N 4 HOH B 99 499 546 HOH HOH . N 4 HOH B 100 500 547 HOH HOH . N 4 HOH B 101 501 548 HOH HOH . N 4 HOH B 102 502 549 HOH HOH . N 4 HOH B 103 503 550 HOH HOH . N 4 HOH B 104 504 551 HOH HOH . N 4 HOH B 105 505 552 HOH HOH . N 4 HOH B 106 506 553 HOH HOH . N 4 HOH B 107 507 554 HOH HOH . N 4 HOH B 108 508 555 HOH HOH . N 4 HOH B 109 509 556 HOH HOH . N 4 HOH B 110 510 557 HOH HOH . N 4 HOH B 111 511 558 HOH HOH . N 4 HOH B 112 512 646 HOH HOH . N 4 HOH B 113 513 647 HOH HOH . N 4 HOH B 114 514 648 HOH HOH . N 4 HOH B 115 515 650 HOH HOH . N 4 HOH B 116 516 651 HOH HOH . N 4 HOH B 117 517 652 HOH HOH . N 4 HOH B 118 518 653 HOH HOH . N 4 HOH B 119 519 654 HOH HOH . O 4 HOH C 1 401 36 HOH HOH . O 4 HOH C 2 402 92 HOH HOH . O 4 HOH C 3 403 93 HOH HOH . O 4 HOH C 4 404 94 HOH HOH . O 4 HOH C 5 405 95 HOH HOH . O 4 HOH C 6 406 96 HOH HOH . O 4 HOH C 7 407 97 HOH HOH . O 4 HOH C 8 408 98 HOH HOH . O 4 HOH C 9 409 99 HOH HOH . O 4 HOH C 10 410 100 HOH HOH . O 4 HOH C 11 411 101 HOH HOH . O 4 HOH C 12 412 102 HOH HOH . O 4 HOH C 13 413 103 HOH HOH . O 4 HOH C 14 414 104 HOH HOH . O 4 HOH C 15 415 105 HOH HOH . O 4 HOH C 16 416 106 HOH HOH . O 4 HOH C 17 417 107 HOH HOH . O 4 HOH C 18 418 108 HOH HOH . O 4 HOH C 19 419 109 HOH HOH . O 4 HOH C 20 420 110 HOH HOH . O 4 HOH C 21 421 112 HOH HOH . O 4 HOH C 22 422 113 HOH HOH . O 4 HOH C 23 423 114 HOH HOH . O 4 HOH C 24 424 115 HOH HOH . O 4 HOH C 25 425 116 HOH HOH . O 4 HOH C 26 426 117 HOH HOH . O 4 HOH C 27 427 118 HOH HOH . O 4 HOH C 28 428 119 HOH HOH . O 4 HOH C 29 429 120 HOH HOH . O 4 HOH C 30 430 121 HOH HOH . O 4 HOH C 31 431 122 HOH HOH . O 4 HOH C 32 432 123 HOH HOH . O 4 HOH C 33 433 124 HOH HOH . O 4 HOH C 34 434 125 HOH HOH . O 4 HOH C 35 435 126 HOH HOH . O 4 HOH C 36 436 127 HOH HOH . O 4 HOH C 37 437 128 HOH HOH . O 4 HOH C 38 438 129 HOH HOH . O 4 HOH C 39 439 130 HOH HOH . O 4 HOH C 40 440 131 HOH HOH . O 4 HOH C 41 441 132 HOH HOH . O 4 HOH C 42 442 133 HOH HOH . O 4 HOH C 43 443 134 HOH HOH . O 4 HOH C 44 444 135 HOH HOH . O 4 HOH C 45 445 136 HOH HOH . O 4 HOH C 46 446 167 HOH HOH . O 4 HOH C 47 447 181 HOH HOH . O 4 HOH C 48 448 182 HOH HOH . O 4 HOH C 49 449 184 HOH HOH . O 4 HOH C 50 450 188 HOH HOH . O 4 HOH C 51 451 198 HOH HOH . O 4 HOH C 52 452 200 HOH HOH . O 4 HOH C 53 453 201 HOH HOH . O 4 HOH C 54 454 202 HOH HOH . O 4 HOH C 55 455 206 HOH HOH . O 4 HOH C 56 456 208 HOH HOH . O 4 HOH C 57 457 213 HOH HOH . O 4 HOH C 58 458 214 HOH HOH . O 4 HOH C 59 459 216 HOH HOH . O 4 HOH C 60 460 224 HOH HOH . O 4 HOH C 61 461 225 HOH HOH . O 4 HOH C 62 462 230 HOH HOH . O 4 HOH C 63 463 233 HOH HOH . O 4 HOH C 64 464 239 HOH HOH . O 4 HOH C 65 465 243 HOH HOH . O 4 HOH C 66 466 253 HOH HOH . O 4 HOH C 67 467 259 HOH HOH . O 4 HOH C 68 468 268 HOH HOH . O 4 HOH C 69 469 271 HOH HOH . O 4 HOH C 70 470 275 HOH HOH . O 4 HOH C 71 471 276 HOH HOH . O 4 HOH C 72 472 277 HOH HOH . O 4 HOH C 73 473 280 HOH HOH . O 4 HOH C 74 474 282 HOH HOH . O 4 HOH C 75 475 287 HOH HOH . O 4 HOH C 76 476 299 HOH HOH . O 4 HOH C 77 477 300 HOH HOH . O 4 HOH C 78 478 302 HOH HOH . O 4 HOH C 79 479 303 HOH HOH . O 4 HOH C 80 480 304 HOH HOH . O 4 HOH C 81 481 306 HOH HOH . O 4 HOH C 82 482 311 HOH HOH . O 4 HOH C 83 483 317 HOH HOH . O 4 HOH C 84 484 322 HOH HOH . O 4 HOH C 85 485 327 HOH HOH . O 4 HOH C 86 486 328 HOH HOH . O 4 HOH C 87 487 334 HOH HOH . O 4 HOH C 88 488 343 HOH HOH . O 4 HOH C 89 489 346 HOH HOH . O 4 HOH C 90 490 348 HOH HOH . O 4 HOH C 91 491 350 HOH HOH . O 4 HOH C 92 492 353 HOH HOH . O 4 HOH C 93 493 363 HOH HOH . O 4 HOH C 94 494 391 HOH HOH . O 4 HOH C 95 495 392 HOH HOH . O 4 HOH C 96 496 393 HOH HOH . O 4 HOH C 97 497 394 HOH HOH . O 4 HOH C 98 498 395 HOH HOH . O 4 HOH C 99 499 396 HOH HOH . O 4 HOH C 100 500 397 HOH HOH . O 4 HOH C 101 501 398 HOH HOH . O 4 HOH C 102 502 399 HOH HOH . O 4 HOH C 103 503 400 HOH HOH . O 4 HOH C 104 504 401 HOH HOH . O 4 HOH C 105 505 402 HOH HOH . O 4 HOH C 106 506 403 HOH HOH . O 4 HOH C 107 507 404 HOH HOH . O 4 HOH C 108 508 405 HOH HOH . O 4 HOH C 109 509 406 HOH HOH . O 4 HOH C 110 510 407 HOH HOH . O 4 HOH C 111 511 408 HOH HOH . O 4 HOH C 112 512 409 HOH HOH . O 4 HOH C 113 513 410 HOH HOH . O 4 HOH C 114 514 411 HOH HOH . O 4 HOH C 115 515 428 HOH HOH . O 4 HOH C 116 516 448 HOH HOH . O 4 HOH C 117 517 449 HOH HOH . O 4 HOH C 118 518 450 HOH HOH . O 4 HOH C 119 519 451 HOH HOH . O 4 HOH C 120 520 452 HOH HOH . O 4 HOH C 121 521 464 HOH HOH . O 4 HOH C 122 522 508 HOH HOH . O 4 HOH C 123 523 509 HOH HOH . O 4 HOH C 124 524 559 HOH HOH . O 4 HOH C 125 525 560 HOH HOH . O 4 HOH C 126 526 561 HOH HOH . O 4 HOH C 127 527 562 HOH HOH . O 4 HOH C 128 528 563 HOH HOH . O 4 HOH C 129 529 564 HOH HOH . O 4 HOH C 130 530 565 HOH HOH . O 4 HOH C 131 531 566 HOH HOH . O 4 HOH C 132 532 567 HOH HOH . O 4 HOH C 133 533 568 HOH HOH . O 4 HOH C 134 534 569 HOH HOH . O 4 HOH C 135 535 570 HOH HOH . O 4 HOH C 136 536 571 HOH HOH . O 4 HOH C 137 537 572 HOH HOH . O 4 HOH C 138 538 573 HOH HOH . O 4 HOH C 139 539 574 HOH HOH . O 4 HOH C 140 540 575 HOH HOH . O 4 HOH C 141 541 576 HOH HOH . O 4 HOH C 142 542 577 HOH HOH . O 4 HOH C 143 543 578 HOH HOH . O 4 HOH C 144 544 579 HOH HOH . O 4 HOH C 145 545 580 HOH HOH . O 4 HOH C 146 546 581 HOH HOH . O 4 HOH C 147 547 582 HOH HOH . O 4 HOH C 148 548 583 HOH HOH . O 4 HOH C 149 549 584 HOH HOH . O 4 HOH C 150 550 585 HOH HOH . O 4 HOH C 151 551 586 HOH HOH . O 4 HOH C 152 552 587 HOH HOH . O 4 HOH C 153 553 588 HOH HOH . O 4 HOH C 154 554 589 HOH HOH . O 4 HOH C 155 555 590 HOH HOH . O 4 HOH C 156 556 591 HOH HOH . O 4 HOH C 157 557 593 HOH HOH . O 4 HOH C 158 558 594 HOH HOH . O 4 HOH C 159 559 595 HOH HOH . O 4 HOH C 160 560 596 HOH HOH . O 4 HOH C 161 561 597 HOH HOH . O 4 HOH C 162 562 598 HOH HOH . O 4 HOH C 163 563 599 HOH HOH . O 4 HOH C 164 564 600 HOH HOH . O 4 HOH C 165 565 602 HOH HOH . O 4 HOH C 166 566 603 HOH HOH . O 4 HOH C 167 567 604 HOH HOH . O 4 HOH C 168 568 605 HOH HOH . O 4 HOH C 169 569 606 HOH HOH . O 4 HOH C 170 570 607 HOH HOH . O 4 HOH C 171 571 655 HOH HOH . P 4 HOH D 1 401 83 HOH HOH . P 4 HOH D 2 402 137 HOH HOH . P 4 HOH D 3 403 138 HOH HOH . P 4 HOH D 4 404 139 HOH HOH . P 4 HOH D 5 405 140 HOH HOH . P 4 HOH D 6 406 141 HOH HOH . P 4 HOH D 7 407 142 HOH HOH . P 4 HOH D 8 408 143 HOH HOH . P 4 HOH D 9 409 144 HOH HOH . P 4 HOH D 10 410 145 HOH HOH . P 4 HOH D 11 411 146 HOH HOH . P 4 HOH D 12 412 147 HOH HOH . P 4 HOH D 13 413 148 HOH HOH . P 4 HOH D 14 414 149 HOH HOH . P 4 HOH D 15 415 150 HOH HOH . P 4 HOH D 16 416 151 HOH HOH . P 4 HOH D 17 417 152 HOH HOH . P 4 HOH D 18 418 153 HOH HOH . P 4 HOH D 19 419 154 HOH HOH . P 4 HOH D 20 420 155 HOH HOH . P 4 HOH D 21 421 156 HOH HOH . P 4 HOH D 22 422 157 HOH HOH . P 4 HOH D 23 423 158 HOH HOH . P 4 HOH D 24 424 159 HOH HOH . P 4 HOH D 25 425 160 HOH HOH . P 4 HOH D 26 426 161 HOH HOH . P 4 HOH D 27 427 162 HOH HOH . P 4 HOH D 28 428 163 HOH HOH . P 4 HOH D 29 429 164 HOH HOH . P 4 HOH D 30 430 165 HOH HOH . P 4 HOH D 31 431 166 HOH HOH . P 4 HOH D 32 432 168 HOH HOH . P 4 HOH D 33 433 169 HOH HOH . P 4 HOH D 34 434 170 HOH HOH . P 4 HOH D 35 435 171 HOH HOH . P 4 HOH D 36 436 172 HOH HOH . P 4 HOH D 37 437 173 HOH HOH . P 4 HOH D 38 438 174 HOH HOH . P 4 HOH D 39 439 176 HOH HOH . P 4 HOH D 40 440 177 HOH HOH . P 4 HOH D 41 441 178 HOH HOH . P 4 HOH D 42 442 179 HOH HOH . P 4 HOH D 43 443 186 HOH HOH . P 4 HOH D 44 444 193 HOH HOH . P 4 HOH D 45 445 195 HOH HOH . P 4 HOH D 46 446 196 HOH HOH . P 4 HOH D 47 447 197 HOH HOH . P 4 HOH D 48 448 207 HOH HOH . P 4 HOH D 49 449 210 HOH HOH . P 4 HOH D 50 450 211 HOH HOH . P 4 HOH D 51 451 212 HOH HOH . P 4 HOH D 52 452 219 HOH HOH . P 4 HOH D 53 453 222 HOH HOH . P 4 HOH D 54 454 223 HOH HOH . P 4 HOH D 55 455 229 HOH HOH . P 4 HOH D 56 456 234 HOH HOH . P 4 HOH D 57 457 236 HOH HOH . P 4 HOH D 58 458 238 HOH HOH . P 4 HOH D 59 459 244 HOH HOH . P 4 HOH D 60 460 252 HOH HOH . P 4 HOH D 61 461 254 HOH HOH . P 4 HOH D 62 462 257 HOH HOH . P 4 HOH D 63 463 264 HOH HOH . P 4 HOH D 64 464 269 HOH HOH . P 4 HOH D 65 465 274 HOH HOH . P 4 HOH D 66 466 283 HOH HOH . P 4 HOH D 67 467 289 HOH HOH . P 4 HOH D 68 468 292 HOH HOH . P 4 HOH D 69 469 295 HOH HOH . P 4 HOH D 70 470 309 HOH HOH . P 4 HOH D 71 471 310 HOH HOH . P 4 HOH D 72 472 316 HOH HOH . P 4 HOH D 73 473 320 HOH HOH . P 4 HOH D 74 474 326 HOH HOH . P 4 HOH D 75 475 335 HOH HOH . P 4 HOH D 76 476 336 HOH HOH . P 4 HOH D 77 477 339 HOH HOH . P 4 HOH D 78 478 340 HOH HOH . P 4 HOH D 79 479 344 HOH HOH . P 4 HOH D 80 480 345 HOH HOH . P 4 HOH D 81 481 351 HOH HOH . P 4 HOH D 82 482 388 HOH HOH . P 4 HOH D 83 483 389 HOH HOH . P 4 HOH D 84 484 412 HOH HOH . P 4 HOH D 85 485 413 HOH HOH . P 4 HOH D 86 486 414 HOH HOH . P 4 HOH D 87 487 415 HOH HOH . P 4 HOH D 88 488 416 HOH HOH . P 4 HOH D 89 489 417 HOH HOH . P 4 HOH D 90 490 418 HOH HOH . P 4 HOH D 91 491 419 HOH HOH . P 4 HOH D 92 492 420 HOH HOH . P 4 HOH D 93 493 421 HOH HOH . P 4 HOH D 94 494 422 HOH HOH . P 4 HOH D 95 495 423 HOH HOH . P 4 HOH D 96 496 424 HOH HOH . P 4 HOH D 97 497 425 HOH HOH . P 4 HOH D 98 498 426 HOH HOH . P 4 HOH D 99 499 427 HOH HOH . P 4 HOH D 100 500 430 HOH HOH . P 4 HOH D 101 501 431 HOH HOH . P 4 HOH D 102 502 434 HOH HOH . P 4 HOH D 103 503 436 HOH HOH . P 4 HOH D 104 504 439 HOH HOH . P 4 HOH D 105 505 440 HOH HOH . P 4 HOH D 106 506 453 HOH HOH . P 4 HOH D 107 507 454 HOH HOH . P 4 HOH D 108 508 455 HOH HOH . P 4 HOH D 109 509 456 HOH HOH . P 4 HOH D 110 510 457 HOH HOH . P 4 HOH D 111 511 458 HOH HOH . P 4 HOH D 112 512 459 HOH HOH . P 4 HOH D 113 513 460 HOH HOH . P 4 HOH D 114 514 461 HOH HOH . P 4 HOH D 115 515 533 HOH HOH . P 4 HOH D 116 516 534 HOH HOH . P 4 HOH D 117 517 535 HOH HOH . P 4 HOH D 118 518 536 HOH HOH . P 4 HOH D 119 519 538 HOH HOH . P 4 HOH D 120 520 543 HOH HOH . P 4 HOH D 121 521 592 HOH HOH . P 4 HOH D 122 522 601 HOH HOH . P 4 HOH D 123 523 608 HOH HOH . P 4 HOH D 124 524 609 HOH HOH . P 4 HOH D 125 525 610 HOH HOH . P 4 HOH D 126 526 611 HOH HOH . P 4 HOH D 127 527 612 HOH HOH . P 4 HOH D 128 528 613 HOH HOH . P 4 HOH D 129 529 614 HOH HOH . P 4 HOH D 130 530 615 HOH HOH . P 4 HOH D 131 531 616 HOH HOH . P 4 HOH D 132 532 617 HOH HOH . P 4 HOH D 133 533 618 HOH HOH . P 4 HOH D 134 534 619 HOH HOH . P 4 HOH D 135 535 620 HOH HOH . P 4 HOH D 136 536 621 HOH HOH . P 4 HOH D 137 537 622 HOH HOH . P 4 HOH D 138 538 623 HOH HOH . P 4 HOH D 139 539 624 HOH HOH . P 4 HOH D 140 540 625 HOH HOH . P 4 HOH D 141 541 626 HOH HOH . P 4 HOH D 142 542 627 HOH HOH . P 4 HOH D 143 543 628 HOH HOH . P 4 HOH D 144 544 629 HOH HOH . P 4 HOH D 145 545 630 HOH HOH . P 4 HOH D 146 546 631 HOH HOH . P 4 HOH D 147 547 632 HOH HOH . P 4 HOH D 148 548 633 HOH HOH . P 4 HOH D 149 549 634 HOH HOH . P 4 HOH D 150 550 635 HOH HOH . P 4 HOH D 151 551 636 HOH HOH . P 4 HOH D 152 552 637 HOH HOH . P 4 HOH D 153 553 638 HOH HOH . P 4 HOH D 154 554 639 HOH HOH . P 4 HOH D 155 555 640 HOH HOH . P 4 HOH D 156 556 641 HOH HOH . P 4 HOH D 157 557 649 HOH HOH . P 4 HOH D 158 558 656 HOH HOH . P 4 HOH D 159 559 657 HOH HOH . P 4 HOH D 160 560 658 HOH HOH . P 4 HOH D 161 561 659 HOH HOH . P 4 HOH D 162 562 660 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2A QDM . . . J 3 46.063 9.661 18.521 1 19.17 ? O2A QDM 301 C 1 HETATM 2 P PA QDM . . . J 3 45.074 10.725 18.828 1 16.5 ? PA QDM 301 C 1 HETATM 3 O O1A QDM . . . J 3 43.615 10.299 19.134 1 16.64 ? O1A QDM 301 C 1 HETATM 4 O O3A QDM . . . J 3 44.897 11.807 17.653 1 15.6 ? O3A QDM 301 C 1 HETATM 5 P PB QDM . . . J 3 44.034 11.916 16.348 1 15.65 ? PB QDM 301 C 1 HETATM 6 O O1B QDM . . . J 3 43.452 13.268 16.459 1 20.43 ? O1B QDM 301 C 1 HETATM 7 O O3B QDM . . . J 3 45.272 12 15.193 1 13.23 ? O3B QDM 301 C 1 HETATM 8 C C1Q QDM . . . J 3 45.951 13.214 15.217 1 15.24 ? C1Q QDM 301 C 1 HETATM 9 C C2Q QDM . . . J 3 45.505 14.204 14.165 1 17.04 ? C2Q QDM 301 C 1 HETATM 10 O O2Q QDM . . . J 3 44.218 14.815 14.462 1 16.48 ? O2Q QDM 301 C 1 HETATM 11 C C3Q QDM . . . J 3 45.461 13.676 12.755 1 12.77 ? C3Q QDM 301 C 1 HETATM 12 N N3Q QDM . . . J 3 44.975 14.687 11.815 1 13.19 ? N3Q QDM 301 C 1 HETATM 13 C C2M QDM . . . J 3 44.453 14.01 10.625 1 15.76 ? C2M QDM 301 C 1 HETATM 14 C C1M QDM . . . J 3 45.911 15.782 11.434 1 15.13 ? C1M QDM 301 C 1 HETATM 15 C C4Q QDM . . . J 3 46.883 13.131 12.465 1 13.76 ? C4Q QDM 301 C 1 HETATM 16 O O4Q QDM . . . J 3 46.765 12.387 11.281 1 14.12 ? O4Q QDM 301 C 1 HETATM 17 C C5Q QDM . . . J 3 47.184 12.158 13.603 1 12.49 ? C5Q QDM 301 C 1 HETATM 18 C C6Q QDM . . . J 3 48.622 11.692 13.344 1 12.4 ? C6Q QDM 301 C 1 HETATM 19 O O5Q QDM . . . J 3 47.317 12.834 14.804 1 12.68 ? O5Q QDM 301 C 1 HETATM 20 O O2B QDM . . . J 3 43.422 10.637 16.001 1 16.63 ? O2B QDM 301 C 1 HETATM 21 O O5' QDM . . . J 3 45.627 11.609 20.022 1 16.47 ? O5' QDM 301 C 1 HETATM 22 C C5' QDM . . . J 3 44.937 12.769 20.498 1 18.78 ? C5' QDM 301 C 1 HETATM 23 C C4' QDM . . . J 3 45.766 14.029 20.274 1 20.08 ? C4' QDM 301 C 1 HETATM 24 C C3' QDM . . . J 3 47.074 14.049 21.044 1 19.44 ? C3' QDM 301 C 1 HETATM 25 O O3' QDM . . . J 3 48.048 14.754 20.261 1 18.66 ? O3' QDM 301 C 1 HETATM 26 C C2' QDM . . . J 3 46.774 14.819 22.315 1 19.39 ? C2' QDM 301 C 1 HETATM 27 C C1' QDM . . . J 3 45.721 15.793 21.794 1 18.4 ? C1' QDM 301 C 1 HETATM 28 O O4' QDM . . . J 3 44.987 15.1 20.791 1 19.31 ? O4' QDM 301 C 1 HETATM 29 N N1 QDM . . . J 3 44.754 16.349 22.768 1 20.5 ? N1 QDM 301 C 1 HETATM 30 C C6 QDM . . . J 3 43.672 15.65 23.131 1 21.63 ? C6 QDM 301 C 1 HETATM 31 C C5 QDM . . . J 3 42.815 16.246 24.051 1 22.67 ? C5 QDM 301 C 1 HETATM 32 C C5M QDM . . . J 3 41.581 15.492 24.456 1 27.01 ? C5M QDM 301 C 1 HETATM 33 C C4 QDM . . . J 3 43.076 17.523 24.51 1 24.08 ? C4 QDM 301 C 1 HETATM 34 O O4 QDM . . . J 3 42.292 18.155 25.415 1 22.3 ? O4 QDM 301 C 1 HETATM 35 N N3 QDM . . . J 3 44.196 18.18 24.154 1 20.25 ? N3 QDM 301 C 1 HETATM 36 C C2 QDM . . . J 3 45.007 17.56 23.277 1 20.26 ? C2 QDM 301 C 1 HETATM 37 O O2 QDM . . . J 3 46.13 18.235 22.932 1 18.49 ? O2 QDM 301 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 37 #