data_4ORI
#
_model_server_result.job_id            LUifzBi5n2ioJlD-TLA3EA 
_model_server_result.datetime_utc      '2024-11-20 09:37:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ori 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    4ORI 
#
_exptl.entry_id    4ORI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              156.096 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OROTIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.96 
_cell.angle_gamma         90 
_cell.entry_id            4ORI 
_cell.length_a            124.365 
_cell.length_b            43.845 
_cell.length_c            63.305 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ORI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C5 H4 N2 O4' 
_chem_comp.formula_weight    156.096 
_chem_comp.id                ORO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OROTIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 ORO sing 314 n y 
N1 C6 ORO sing 315 n y 
N1 HN1 ORO sing 316 n n 
C2 O2 ORO doub 317 n n 
C2 N3 ORO sing 318 n y 
N3 C4 ORO sing 319 n y 
N3 HN3 ORO sing 320 n n 
C4 O4 ORO doub 321 n n 
C4 C5 ORO sing 322 n y 
C5 C6 ORO doub 323 n y 
C5 H5 ORO sing 324 n n 
C6 C7 ORO sing 325 n n 
C7 O71 ORO doub 326 n n 
C7 O72 ORO sing 327 n n 
O72 HO7 ORO sing 328 n n 
#
_atom_sites.entry_id                     4ORI 
_atom_sites.fract_transf_matrix[1][1]    0.008041 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001412 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022808 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016038 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMN A 1 500 500 FMN FMN . 
C 3 ORO A 1 501 501 ORO ORO . 
D 4 2V6 A 1 502 502 2V6 D38 . 
E 5 HOH A 1 601 1 HOH HOH . 
E 5 HOH A 2 602 2 HOH HOH . 
E 5 HOH A 3 603 3 HOH HOH . 
E 5 HOH A 4 604 4 HOH HOH . 
E 5 HOH A 5 605 5 HOH HOH . 
E 5 HOH A 6 606 6 HOH HOH . 
E 5 HOH A 7 607 7 HOH HOH . 
E 5 HOH A 8 608 8 HOH HOH . 
E 5 HOH A 9 609 9 HOH HOH . 
E 5 HOH A 10 610 10 HOH HOH . 
E 5 HOH A 11 611 11 HOH HOH . 
E 5 HOH A 12 612 12 HOH HOH . 
E 5 HOH A 13 613 13 HOH HOH . 
E 5 HOH A 14 614 14 HOH HOH . 
E 5 HOH A 15 615 15 HOH HOH . 
E 5 HOH A 16 616 16 HOH HOH . 
E 5 HOH A 17 617 17 HOH HOH . 
E 5 HOH A 18 618 18 HOH HOH . 
E 5 HOH A 19 619 19 HOH HOH . 
E 5 HOH A 20 620 20 HOH HOH . 
E 5 HOH A 21 621 21 HOH HOH . 
E 5 HOH A 22 622 22 HOH HOH . 
E 5 HOH A 23 623 23 HOH HOH . 
E 5 HOH A 24 624 24 HOH HOH . 
E 5 HOH A 25 625 25 HOH HOH . 
E 5 HOH A 26 626 26 HOH HOH . 
E 5 HOH A 27 627 27 HOH HOH . 
E 5 HOH A 28 628 28 HOH HOH . 
E 5 HOH A 29 629 29 HOH HOH . 
E 5 HOH A 30 630 30 HOH HOH . 
E 5 HOH A 31 631 31 HOH HOH . 
E 5 HOH A 32 632 32 HOH HOH . 
E 5 HOH A 33 633 33 HOH HOH . 
E 5 HOH A 34 634 34 HOH HOH . 
E 5 HOH A 35 635 35 HOH HOH . 
E 5 HOH A 36 636 37 HOH HOH . 
E 5 HOH A 37 637 38 HOH HOH . 
E 5 HOH A 38 638 39 HOH HOH . 
E 5 HOH A 39 639 40 HOH HOH . 
E 5 HOH A 40 640 41 HOH HOH . 
E 5 HOH A 41 641 42 HOH HOH . 
E 5 HOH A 42 642 43 HOH HOH . 
E 5 HOH A 43 643 45 HOH HOH . 
E 5 HOH A 44 644 46 HOH HOH . 
E 5 HOH A 45 645 49 HOH HOH . 
E 5 HOH A 46 646 50 HOH HOH . 
E 5 HOH A 47 647 51 HOH HOH . 
E 5 HOH A 48 648 52 HOH HOH . 
E 5 HOH A 49 649 53 HOH HOH . 
E 5 HOH A 50 650 54 HOH HOH . 
E 5 HOH A 51 651 55 HOH HOH . 
E 5 HOH A 52 652 56 HOH HOH . 
E 5 HOH A 53 653 58 HOH HOH . 
E 5 HOH A 54 654 59 HOH HOH . 
E 5 HOH A 55 655 60 HOH HOH . 
E 5 HOH A 56 656 61 HOH HOH . 
E 5 HOH A 57 657 63 HOH HOH . 
E 5 HOH A 58 658 64 HOH HOH . 
E 5 HOH A 59 659 65 HOH HOH . 
E 5 HOH A 60 660 66 HOH HOH . 
E 5 HOH A 61 661 67 HOH HOH . 
E 5 HOH A 62 662 68 HOH HOH . 
E 5 HOH A 63 663 69 HOH HOH . 
E 5 HOH A 64 664 72 HOH HOH . 
E 5 HOH A 65 665 73 HOH HOH . 
E 5 HOH A 66 666 75 HOH HOH . 
E 5 HOH A 67 667 76 HOH HOH . 
E 5 HOH A 68 668 78 HOH HOH . 
E 5 HOH A 69 669 79 HOH HOH . 
E 5 HOH A 70 670 80 HOH HOH . 
E 5 HOH A 71 671 81 HOH HOH . 
E 5 HOH A 72 672 82 HOH HOH . 
E 5 HOH A 73 673 83 HOH HOH . 
E 5 HOH A 74 674 84 HOH HOH . 
E 5 HOH A 75 675 85 HOH HOH . 
E 5 HOH A 76 676 86 HOH HOH . 
E 5 HOH A 77 677 87 HOH HOH . 
E 5 HOH A 78 678 89 HOH HOH . 
E 5 HOH A 79 679 90 HOH HOH . 
E 5 HOH A 80 680 91 HOH HOH . 
E 5 HOH A 81 681 93 HOH HOH . 
E 5 HOH A 82 682 94 HOH HOH . 
E 5 HOH A 83 683 96 HOH HOH . 
E 5 HOH A 84 684 97 HOH HOH . 
E 5 HOH A 85 685 98 HOH HOH . 
E 5 HOH A 86 686 100 HOH HOH . 
E 5 HOH A 87 687 101 HOH HOH . 
E 5 HOH A 88 688 102 HOH HOH . 
E 5 HOH A 89 689 103 HOH HOH . 
E 5 HOH A 90 690 107 HOH HOH . 
E 5 HOH A 91 691 111 HOH HOH . 
E 5 HOH A 92 692 112 HOH HOH . 
E 5 HOH A 93 693 113 HOH HOH . 
E 5 HOH A 94 694 114 HOH HOH . 
E 5 HOH A 95 695 115 HOH HOH . 
E 5 HOH A 96 696 116 HOH HOH . 
E 5 HOH A 97 697 117 HOH HOH . 
E 5 HOH A 98 698 118 HOH HOH . 
E 5 HOH A 99 699 119 HOH HOH . 
E 5 HOH A 100 700 120 HOH HOH . 
E 5 HOH A 101 701 121 HOH HOH . 
E 5 HOH A 102 702 123 HOH HOH . 
E 5 HOH A 103 703 124 HOH HOH . 
E 5 HOH A 104 704 125 HOH HOH . 
E 5 HOH A 105 705 126 HOH HOH . 
E 5 HOH A 106 706 127 HOH HOH . 
E 5 HOH A 107 707 128 HOH HOH . 
E 5 HOH A 108 708 129 HOH HOH . 
E 5 HOH A 109 709 130 HOH HOH . 
E 5 HOH A 110 710 131 HOH HOH . 
E 5 HOH A 111 711 132 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 ORO . . . C 3 -12.883 -10.907 12.326 1 32.02 ? N1 ORO 501 A 1 
HETATM 2 C C2 ORO . . . C 3 -13.143 -11.301 13.552 1 29.52 ? C2 ORO 501 A 1 
HETATM 3 O O2 ORO . . . C 3 -12.193 -11.488 14.31 1 30.84 ? O2 ORO 501 A 1 
HETATM 4 N N3 ORO . . . C 3 -14.369 -11.457 13.965 1 26.11 ? N3 ORO 501 A 1 
HETATM 5 C C4 ORO . . . C 3 -15.385 -11.222 13.151 1 26.19 ? C4 ORO 501 A 1 
HETATM 6 O O4 ORO . . . C 3 -16.506 -11.356 13.515 1 26.28 ? O4 ORO 501 A 1 
HETATM 7 C C5 ORO . . . C 3 -15.159 -10.834 11.884 1 26.56 ? C5 ORO 501 A 1 
HETATM 8 C C6 ORO . . . C 3 -13.874 -10.678 11.465 1 31.13 ? C6 ORO 501 A 1 
HETATM 9 C C7 ORO . . . C 3 -13.574 -10.178 10.094 1 34.35 ? C7 ORO 501 A 1 
HETATM 10 O O71 ORO . . . C 3 -14.225 -10.532 9.118 1 33.78 ? O71 ORO 501 A 1 
HETATM 11 O O72 ORO . . . C 3 -12.683 -9.334 10.003 1 34.97 ? O72 ORO 501 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           11 
#