data_4ORK # _model_server_result.job_id DmEZphVCD3VE4uhYMsPoXQ _model_server_result.datetime_utc '2024-11-25 00:15:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ork # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":500}' # _entry.id 4ORK # _exptl.entry_id 4ORK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.88 _cell.angle_gamma 90 _cell.entry_id 4ORK _cell.length_a 90.685 _cell.length_b 95.697 _cell.length_c 91.149 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ORK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,Q 1 1 B,H,I,J,R 2 1 C,K,L,M,S 3 1 D,N,O,P,T 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 219 A ASP 219 1_555 F MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc2 A OD1 ASP 219 A ASP 219 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc3 A OD2 ASP 219 A ASP 219 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc4 E O2B GDP . A GDP 500 1_555 F MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc5 E O1A GDP . A GDP 500 1_555 F MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc6 E O1B GDP . A GDP 500 1_555 G MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc7 F MG MG . A MG 501 1_555 Q O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? metalc ? metalc8 F MG MG . A MG 501 1_555 Q O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? metalc ? metalc9 G MG MG . A MG 502 1_555 Q O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc10 G MG MG . A MG 502 1_555 Q O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? metalc ? metalc11 G MG MG . A MG 502 1_555 Q O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc12 B OD2 ASP 219 B ASP 219 1_555 I MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc13 B OD2 ASP 219 B ASP 219 1_555 J MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc14 B OD1 ASP 219 B ASP 219 1_555 J MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? metalc ? metalc15 H O2B GDP . B GDP 500 1_555 I MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.858 ? metalc ? metalc16 H O1A GDP . B GDP 500 1_555 I MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc17 H O1B GDP . B GDP 500 1_555 J MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc18 I MG MG . B MG 501 1_555 R O HOH . B HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc19 I MG MG . B MG 501 1_555 R O HOH . B HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc20 J MG MG . B MG 502 1_555 R O HOH . B HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.753 ? metalc ? metalc21 J MG MG . B MG 502 1_555 R O HOH . B HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? metalc ? metalc22 J MG MG . B MG 502 1_555 R O HOH . B HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? metalc ? metalc23 C OD2 ASP 219 C ASP 219 1_555 L MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc24 C OD1 ASP 219 C ASP 219 1_555 M MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc25 C OD2 ASP 219 C ASP 219 1_555 M MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc26 K O2B GDP . C GDP 500 1_555 L MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc27 K O2A GDP . C GDP 500 1_555 L MG MG . C MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc28 K O3B GDP . C GDP 500 1_555 M MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc29 L MG MG . C MG 501 1_555 S O HOH . C HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc30 L MG MG . C MG 501 1_555 S O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? metalc ? metalc31 M MG MG . C MG 502 1_555 S O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? metalc ? metalc32 M MG MG . C MG 502 1_555 S O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? metalc ? metalc33 M MG MG . C MG 502 1_555 S O HOH . C HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? metalc ? metalc34 D OD2 ASP 219 D ASP 219 1_555 O MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc35 D OD1 ASP 219 D ASP 219 1_555 P MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc36 D OD2 ASP 219 D ASP 219 1_555 P MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc37 N O2B GDP . D GDP 500 1_555 O MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc38 N O2A GDP . D GDP 500 1_555 O MG MG . D MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc39 N O3B GDP . D GDP 500 1_555 P MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc40 O MG MG . D MG 501 1_555 T O HOH . D HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc41 O MG MG . D MG 501 1_555 T O HOH . D HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? metalc ? metalc42 P MG MG . D MG 502 1_555 T O HOH . D HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? metalc ? metalc43 P MG MG . D MG 502 1_555 T O HOH . D HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? metalc ? metalc44 P MG MG . D MG 502 1_555 T O HOH . D HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 4ORK _atom_sites.fract_transf_matrix[1][1] 0.011027 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00293 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01045 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GDP A 1 500 500 GDP GDP . F 3 MG A 1 501 501 MG MG . G 3 MG A 1 502 502 MG MG . H 2 GDP B 1 500 500 GDP GDP . I 3 MG B 1 501 501 MG MG . J 3 MG B 1 502 502 MG MG . K 2 GDP C 1 500 500 GDP GDP . L 3 MG C 1 501 501 MG MG . M 3 MG C 1 502 502 MG MG . N 2 GDP D 1 500 500 GDP GDP . O 3 MG D 1 501 501 MG MG . P 3 MG D 1 502 502 MG MG . Q 4 HOH A 1 601 503 HOH HOH . Q 4 HOH A 2 602 504 HOH HOH . Q 4 HOH A 3 603 505 HOH HOH . Q 4 HOH A 4 604 506 HOH HOH . Q 4 HOH A 5 605 507 HOH HOH . Q 4 HOH A 6 606 3 HOH HOH . Q 4 HOH A 7 607 5 HOH HOH . Q 4 HOH A 8 608 12 HOH HOH . Q 4 HOH A 9 609 18 HOH HOH . Q 4 HOH A 10 610 19 HOH HOH . Q 4 HOH A 11 611 20 HOH HOH . Q 4 HOH A 12 612 25 HOH HOH . Q 4 HOH A 13 613 27 HOH HOH . Q 4 HOH A 14 614 29 HOH HOH . Q 4 HOH A 15 615 33 HOH HOH . Q 4 HOH A 16 616 36 HOH HOH . Q 4 HOH A 17 617 48 HOH HOH . Q 4 HOH A 18 618 50 HOH HOH . Q 4 HOH A 19 619 54 HOH HOH . Q 4 HOH A 20 620 57 HOH HOH . Q 4 HOH A 21 621 58 HOH HOH . Q 4 HOH A 22 622 63 HOH HOH . Q 4 HOH A 23 623 68 HOH HOH . Q 4 HOH A 24 624 69 HOH HOH . Q 4 HOH A 25 625 71 HOH HOH . Q 4 HOH A 26 626 73 HOH HOH . Q 4 HOH A 27 627 74 HOH HOH . Q 4 HOH A 28 628 75 HOH HOH . Q 4 HOH A 29 629 102 HOH HOH . Q 4 HOH A 30 630 103 HOH HOH . Q 4 HOH A 31 631 109 HOH HOH . Q 4 HOH A 32 632 113 HOH HOH . Q 4 HOH A 33 633 115 HOH HOH . Q 4 HOH A 34 634 119 HOH HOH . Q 4 HOH A 35 635 120 HOH HOH . Q 4 HOH A 36 636 121 HOH HOH . Q 4 HOH A 37 637 123 HOH HOH . Q 4 HOH A 38 638 126 HOH HOH . Q 4 HOH A 39 639 128 HOH HOH . Q 4 HOH A 40 640 130 HOH HOH . Q 4 HOH A 41 641 131 HOH HOH . Q 4 HOH A 42 642 139 HOH HOH . Q 4 HOH A 43 643 142 HOH HOH . Q 4 HOH A 44 644 144 HOH HOH . Q 4 HOH A 45 645 151 HOH HOH . Q 4 HOH A 46 646 155 HOH HOH . Q 4 HOH A 47 647 156 HOH HOH . Q 4 HOH A 48 648 160 HOH HOH . Q 4 HOH A 49 649 165 HOH HOH . Q 4 HOH A 50 650 168 HOH HOH . Q 4 HOH A 51 651 169 HOH HOH . Q 4 HOH A 52 652 178 HOH HOH . Q 4 HOH A 53 653 179 HOH HOH . R 4 HOH B 1 601 503 HOH HOH . R 4 HOH B 2 602 504 HOH HOH . R 4 HOH B 3 603 505 HOH HOH . R 4 HOH B 4 604 506 HOH HOH . R 4 HOH B 5 605 507 HOH HOH . R 4 HOH B 6 606 2 HOH HOH . R 4 HOH B 7 607 11 HOH HOH . R 4 HOH B 8 608 17 HOH HOH . R 4 HOH B 9 609 26 HOH HOH . R 4 HOH B 10 610 32 HOH HOH . R 4 HOH B 11 611 34 HOH HOH . R 4 HOH B 12 612 35 HOH HOH . R 4 HOH B 13 613 42 HOH HOH . R 4 HOH B 14 614 44 HOH HOH . R 4 HOH B 15 615 53 HOH HOH . R 4 HOH B 16 616 59 HOH HOH . R 4 HOH B 17 617 61 HOH HOH . R 4 HOH B 18 618 62 HOH HOH . R 4 HOH B 19 619 65 HOH HOH . R 4 HOH B 20 620 67 HOH HOH . R 4 HOH B 21 621 76 HOH HOH . R 4 HOH B 22 622 77 HOH HOH . R 4 HOH B 23 623 86 HOH HOH . R 4 HOH B 24 624 87 HOH HOH . R 4 HOH B 25 625 88 HOH HOH . R 4 HOH B 26 626 89 HOH HOH . R 4 HOH B 27 627 90 HOH HOH . R 4 HOH B 28 628 91 HOH HOH . R 4 HOH B 29 629 92 HOH HOH . R 4 HOH B 30 630 93 HOH HOH . R 4 HOH B 31 631 96 HOH HOH . R 4 HOH B 32 632 97 HOH HOH . R 4 HOH B 33 633 98 HOH HOH . R 4 HOH B 34 634 100 HOH HOH . R 4 HOH B 35 635 111 HOH HOH . R 4 HOH B 36 636 112 HOH HOH . R 4 HOH B 37 637 114 HOH HOH . R 4 HOH B 38 638 116 HOH HOH . R 4 HOH B 39 639 117 HOH HOH . R 4 HOH B 40 640 118 HOH HOH . R 4 HOH B 41 641 122 HOH HOH . R 4 HOH B 42 642 125 HOH HOH . R 4 HOH B 43 643 127 HOH HOH . R 4 HOH B 44 644 132 HOH HOH . R 4 HOH B 45 645 134 HOH HOH . R 4 HOH B 46 646 145 HOH HOH . R 4 HOH B 47 647 157 HOH HOH . R 4 HOH B 48 648 158 HOH HOH . R 4 HOH B 49 649 167 HOH HOH . R 4 HOH B 50 650 170 HOH HOH . R 4 HOH B 51 651 171 HOH HOH . R 4 HOH B 52 652 172 HOH HOH . R 4 HOH B 53 653 175 HOH HOH . R 4 HOH B 54 654 176 HOH HOH . R 4 HOH B 55 655 184 HOH HOH . R 4 HOH B 56 656 190 HOH HOH . S 4 HOH C 1 601 504 HOH HOH . S 4 HOH C 2 602 503 HOH HOH . S 4 HOH C 3 603 505 HOH HOH . S 4 HOH C 4 604 506 HOH HOH . S 4 HOH C 5 605 507 HOH HOH . S 4 HOH C 6 606 1 HOH HOH . S 4 HOH C 7 607 4 HOH HOH . S 4 HOH C 8 608 7 HOH HOH . S 4 HOH C 9 609 10 HOH HOH . S 4 HOH C 10 610 13 HOH HOH . S 4 HOH C 11 611 15 HOH HOH . S 4 HOH C 12 612 22 HOH HOH . S 4 HOH C 13 613 23 HOH HOH . S 4 HOH C 14 614 24 HOH HOH . S 4 HOH C 15 615 28 HOH HOH . S 4 HOH C 16 616 31 HOH HOH . S 4 HOH C 17 617 37 HOH HOH . S 4 HOH C 18 618 38 HOH HOH . S 4 HOH C 19 619 41 HOH HOH . S 4 HOH C 20 620 45 HOH HOH . S 4 HOH C 21 621 47 HOH HOH . S 4 HOH C 22 622 49 HOH HOH . S 4 HOH C 23 623 51 HOH HOH . S 4 HOH C 24 624 52 HOH HOH . S 4 HOH C 25 625 56 HOH HOH . S 4 HOH C 26 626 64 HOH HOH . S 4 HOH C 27 627 70 HOH HOH . S 4 HOH C 28 628 78 HOH HOH . S 4 HOH C 29 629 80 HOH HOH . S 4 HOH C 30 630 81 HOH HOH . S 4 HOH C 31 631 82 HOH HOH . S 4 HOH C 32 632 94 HOH HOH . S 4 HOH C 33 633 99 HOH HOH . S 4 HOH C 34 634 101 HOH HOH . S 4 HOH C 35 635 104 HOH HOH . S 4 HOH C 36 636 105 HOH HOH . S 4 HOH C 37 637 106 HOH HOH . S 4 HOH C 38 638 108 HOH HOH . S 4 HOH C 39 639 140 HOH HOH . S 4 HOH C 40 640 141 HOH HOH . S 4 HOH C 41 641 147 HOH HOH . S 4 HOH C 42 642 152 HOH HOH . S 4 HOH C 43 643 154 HOH HOH . S 4 HOH C 44 644 161 HOH HOH . S 4 HOH C 45 645 162 HOH HOH . S 4 HOH C 46 646 163 HOH HOH . S 4 HOH C 47 647 164 HOH HOH . S 4 HOH C 48 648 173 HOH HOH . S 4 HOH C 49 649 182 HOH HOH . S 4 HOH C 50 650 183 HOH HOH . S 4 HOH C 51 651 185 HOH HOH . S 4 HOH C 52 652 186 HOH HOH . S 4 HOH C 53 653 187 HOH HOH . S 4 HOH C 54 654 188 HOH HOH . S 4 HOH C 55 655 189 HOH HOH . S 4 HOH C 56 656 192 HOH HOH . T 4 HOH D 1 601 503 HOH HOH . T 4 HOH D 2 602 504 HOH HOH . T 4 HOH D 3 603 505 HOH HOH . T 4 HOH D 4 604 506 HOH HOH . T 4 HOH D 5 605 507 HOH HOH . T 4 HOH D 6 606 6 HOH HOH . T 4 HOH D 7 607 8 HOH HOH . T 4 HOH D 8 608 9 HOH HOH . T 4 HOH D 9 609 14 HOH HOH . T 4 HOH D 10 610 16 HOH HOH . T 4 HOH D 11 611 21 HOH HOH . T 4 HOH D 12 612 30 HOH HOH . T 4 HOH D 13 613 39 HOH HOH . T 4 HOH D 14 614 40 HOH HOH . T 4 HOH D 15 615 43 HOH HOH . T 4 HOH D 16 616 46 HOH HOH . T 4 HOH D 17 617 55 HOH HOH . T 4 HOH D 18 618 60 HOH HOH . T 4 HOH D 19 619 66 HOH HOH . T 4 HOH D 20 620 72 HOH HOH . T 4 HOH D 21 621 79 HOH HOH . T 4 HOH D 22 622 83 HOH HOH . T 4 HOH D 23 623 84 HOH HOH . T 4 HOH D 24 624 85 HOH HOH . T 4 HOH D 25 625 95 HOH HOH . T 4 HOH D 26 626 107 HOH HOH . T 4 HOH D 27 627 110 HOH HOH . T 4 HOH D 28 628 124 HOH HOH . T 4 HOH D 29 629 129 HOH HOH . T 4 HOH D 30 630 133 HOH HOH . T 4 HOH D 31 631 135 HOH HOH . T 4 HOH D 32 632 136 HOH HOH . T 4 HOH D 33 633 137 HOH HOH . T 4 HOH D 34 634 143 HOH HOH . T 4 HOH D 35 635 146 HOH HOH . T 4 HOH D 36 636 148 HOH HOH . T 4 HOH D 37 637 149 HOH HOH . T 4 HOH D 38 638 150 HOH HOH . T 4 HOH D 39 639 166 HOH HOH . T 4 HOH D 40 640 180 HOH HOH . T 4 HOH D 41 641 181 HOH HOH . T 4 HOH D 42 642 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . N 2 68.031 29.17 74.467 1 65.42 ? PB GDP 500 D 1 HETATM 2 O O1B GDP . . . N 2 68.775 28.448 73.368 1 67.99 ? O1B GDP 500 D 1 HETATM 3 O O2B GDP . . . N 2 68.859 30.2 75.226 1 62.68 ? O2B GDP 500 D 1 HETATM 4 O O3B GDP . . . N 2 67.563 28.113 75.443 1 74.97 ? O3B GDP 500 D 1 HETATM 5 O O3A GDP . . . N 2 66.851 29.942 73.693 1 70.76 ? O3A GDP 500 D 1 HETATM 6 P PA GDP . . . N 2 66.12 31.229 74.316 1 60.58 ? PA GDP 500 D 1 HETATM 7 O O1A GDP . . . N 2 64.793 30.78 74.905 1 66.67 ? O1A GDP 500 D 1 HETATM 8 O O2A GDP . . . N 2 66.989 31.932 75.341 1 63.22 ? O2A GDP 500 D 1 HETATM 9 O O5' GDP . . . N 2 65.879 32.192 73.052 1 78.16 ? O5' GDP 500 D 1 HETATM 10 C C5' GDP . . . N 2 67.017 32.668 72.336 1 72.02 ? C5' GDP 500 D 1 HETATM 11 C C4' GDP . . . N 2 66.892 34.165 72.148 1 63.84 ? C4' GDP 500 D 1 HETATM 12 O O4' GDP . . . N 2 65.711 34.464 71.406 1 71.49 ? O4' GDP 500 D 1 HETATM 13 C C3' GDP . . . N 2 66.707 34.875 73.471 1 65.33 ? C3' GDP 500 D 1 HETATM 14 O O3' GDP . . . N 2 67.931 35.28 74.07 1 67.01 ? O3' GDP 500 D 1 HETATM 15 C C2' GDP . . . N 2 65.911 36.097 73.1 1 72.46 ? C2' GDP 500 D 1 HETATM 16 O O2' GDP . . . N 2 66.819 37.154 72.793 1 75.08 ? O2' GDP 500 D 1 HETATM 17 C C1' GDP . . . N 2 65.114 35.676 71.88 1 74.54 ? C1' GDP 500 D 1 HETATM 18 N N9 GDP . . . N 2 63.733 35.385 72.345 1 77.44 ? N9 GDP 500 D 1 HETATM 19 C C8 GDP . . . N 2 63.197 34.153 72.474 1 76.06 ? C8 GDP 500 D 1 HETATM 20 N N7 GDP . . . N 2 61.93 34.213 72.943 1 69.64 ? N7 GDP 500 D 1 HETATM 21 C C5 GDP . . . N 2 61.643 35.517 73.138 1 72.49 ? C5 GDP 500 D 1 HETATM 22 C C6 GDP . . . N 2 60.471 36.288 73.623 1 74.3 ? C6 GDP 500 D 1 HETATM 23 O O6 GDP . . . N 2 59.417 35.686 73.963 1 73.02 ? O6 GDP 500 D 1 HETATM 24 N N1 GDP . . . N 2 60.576 37.63 73.66 1 67.99 ? N1 GDP 500 D 1 HETATM 25 C C2 GDP . . . N 2 61.705 38.275 73.292 1 66.11 ? C2 GDP 500 D 1 HETATM 26 N N2 GDP . . . N 2 61.761 39.629 73.36 1 66.6 ? N2 GDP 500 D 1 HETATM 27 N N3 GDP . . . N 2 62.809 37.63 72.847 1 66.67 ? N3 GDP 500 D 1 HETATM 28 C C4 GDP . . . N 2 62.833 36.282 72.745 1 68.78 ? C4 GDP 500 D 1 # _model_server_stats.io_time_ms 118 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 82 _model_server_stats.element_count 28 #