data_4ORM
#
_model_server_result.job_id            jAxnPfrZLS9d2HM-ws1d6w 
_model_server_result.datetime_utc      '2024-11-05 10:59:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4orm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1003}' 
#
_entry.id    4ORM 
#
_exptl.entry_id    4ORM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              156.096 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OROTIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4ORM 
_cell.length_a            85.471 
_cell.length_b            85.471 
_cell.length_c            138.275 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ORM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C5 H4 N2 O4' 
_chem_comp.formula_weight    156.096 
_chem_comp.id                ORO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OROTIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 ORO sing 340 n y 
N1 C6 ORO sing 341 n y 
N1 HN1 ORO sing 342 n n 
C2 O2 ORO doub 343 n n 
C2 N3 ORO sing 344 n y 
N3 C4 ORO sing 345 n y 
N3 HN3 ORO sing 346 n n 
C4 O4 ORO doub 347 n n 
C4 C5 ORO sing 348 n y 
C5 C6 ORO doub 349 n y 
C5 H5 ORO sing 350 n n 
C6 C7 ORO sing 351 n n 
C7 O71 ORO doub 352 n n 
C7 O72 ORO sing 353 n n 
O72 HO7 ORO sing 354 n n 
#
_atom_sites.entry_id                     4ORM 
_atom_sites.fract_transf_matrix[1][1]    0.0117 
_atom_sites.fract_transf_matrix[1][2]    0.006755 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01351 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007232 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 2V6 A 1 1001 1001 2V6 D38 . 
C 3 FMN A 1 1002 1002 FMN FMN . 
D 4 ORO A 1 1003 1003 ORO ORO . 
E 5 GOL A 1 1004 1004 GOL GOL . 
F 6 SO4 A 1 1005 1005 SO4 SO4 . 
G 6 SO4 A 1 1006 1006 SO4 SO4 . 
H 7 HOH A 1 1101 1 HOH HOH . 
H 7 HOH A 2 1102 2 HOH HOH . 
H 7 HOH A 3 1103 3 HOH HOH . 
H 7 HOH A 4 1104 4 HOH HOH . 
H 7 HOH A 5 1105 5 HOH HOH . 
H 7 HOH A 6 1106 6 HOH HOH . 
H 7 HOH A 7 1107 7 HOH HOH . 
H 7 HOH A 8 1108 8 HOH HOH . 
H 7 HOH A 9 1109 9 HOH HOH . 
H 7 HOH A 10 1110 10 HOH HOH . 
H 7 HOH A 11 1111 11 HOH HOH . 
H 7 HOH A 12 1112 12 HOH HOH . 
H 7 HOH A 13 1113 13 HOH HOH . 
H 7 HOH A 14 1114 14 HOH HOH . 
H 7 HOH A 15 1115 15 HOH HOH . 
H 7 HOH A 16 1116 16 HOH HOH . 
H 7 HOH A 17 1117 17 HOH HOH . 
H 7 HOH A 18 1118 18 HOH HOH . 
H 7 HOH A 19 1119 19 HOH HOH . 
H 7 HOH A 20 1120 20 HOH HOH . 
H 7 HOH A 21 1121 21 HOH HOH . 
H 7 HOH A 22 1122 22 HOH HOH . 
H 7 HOH A 23 1123 23 HOH HOH . 
H 7 HOH A 24 1124 24 HOH HOH . 
H 7 HOH A 25 1125 25 HOH HOH . 
H 7 HOH A 26 1126 26 HOH HOH . 
H 7 HOH A 27 1127 27 HOH HOH . 
H 7 HOH A 28 1128 28 HOH HOH . 
H 7 HOH A 29 1129 29 HOH HOH . 
H 7 HOH A 30 1130 30 HOH HOH . 
H 7 HOH A 31 1131 31 HOH HOH . 
H 7 HOH A 32 1132 32 HOH HOH . 
H 7 HOH A 33 1133 33 HOH HOH . 
H 7 HOH A 34 1134 34 HOH HOH . 
H 7 HOH A 35 1135 35 HOH HOH . 
H 7 HOH A 36 1136 36 HOH HOH . 
H 7 HOH A 37 1137 37 HOH HOH . 
H 7 HOH A 38 1138 38 HOH HOH . 
H 7 HOH A 39 1139 39 HOH HOH . 
H 7 HOH A 40 1140 40 HOH HOH . 
H 7 HOH A 41 1141 41 HOH HOH . 
H 7 HOH A 42 1142 42 HOH HOH . 
H 7 HOH A 43 1143 43 HOH HOH . 
H 7 HOH A 44 1144 44 HOH HOH . 
H 7 HOH A 45 1145 45 HOH HOH . 
H 7 HOH A 46 1146 46 HOH HOH . 
H 7 HOH A 47 1147 47 HOH HOH . 
H 7 HOH A 48 1148 48 HOH HOH . 
H 7 HOH A 49 1149 49 HOH HOH . 
H 7 HOH A 50 1150 50 HOH HOH . 
H 7 HOH A 51 1151 51 HOH HOH . 
H 7 HOH A 52 1152 52 HOH HOH . 
H 7 HOH A 53 1153 53 HOH HOH . 
H 7 HOH A 54 1154 54 HOH HOH . 
H 7 HOH A 55 1155 55 HOH HOH . 
H 7 HOH A 56 1156 56 HOH HOH . 
H 7 HOH A 57 1157 57 HOH HOH . 
H 7 HOH A 58 1158 58 HOH HOH . 
H 7 HOH A 59 1159 59 HOH HOH . 
H 7 HOH A 60 1160 60 HOH HOH . 
H 7 HOH A 61 1161 61 HOH HOH . 
H 7 HOH A 62 1162 62 HOH HOH . 
H 7 HOH A 63 1163 65 HOH HOH . 
H 7 HOH A 64 1164 66 HOH HOH . 
H 7 HOH A 65 1165 67 HOH HOH . 
H 7 HOH A 66 1166 68 HOH HOH . 
H 7 HOH A 67 1167 69 HOH HOH . 
H 7 HOH A 68 1168 70 HOH HOH . 
H 7 HOH A 69 1169 71 HOH HOH . 
H 7 HOH A 70 1170 72 HOH HOH . 
H 7 HOH A 71 1171 73 HOH HOH . 
H 7 HOH A 72 1172 74 HOH HOH . 
H 7 HOH A 73 1173 75 HOH HOH . 
H 7 HOH A 74 1174 76 HOH HOH . 
H 7 HOH A 75 1175 77 HOH HOH . 
H 7 HOH A 76 1176 78 HOH HOH . 
H 7 HOH A 77 1177 79 HOH HOH . 
H 7 HOH A 78 1178 80 HOH HOH . 
H 7 HOH A 79 1179 81 HOH HOH . 
H 7 HOH A 80 1180 82 HOH HOH . 
H 7 HOH A 81 1181 83 HOH HOH . 
H 7 HOH A 82 1182 85 HOH HOH . 
H 7 HOH A 83 1183 86 HOH HOH . 
H 7 HOH A 84 1184 88 HOH HOH . 
H 7 HOH A 85 1185 89 HOH HOH . 
H 7 HOH A 86 1186 90 HOH HOH . 
H 7 HOH A 87 1187 91 HOH HOH . 
H 7 HOH A 88 1188 92 HOH HOH . 
H 7 HOH A 89 1189 93 HOH HOH . 
H 7 HOH A 90 1190 94 HOH HOH . 
H 7 HOH A 91 1191 95 HOH HOH . 
H 7 HOH A 92 1192 96 HOH HOH . 
H 7 HOH A 93 1193 97 HOH HOH . 
H 7 HOH A 94 1194 98 HOH HOH . 
H 7 HOH A 95 1195 99 HOH HOH . 
H 7 HOH A 96 1196 100 HOH HOH . 
H 7 HOH A 97 1197 101 HOH HOH . 
H 7 HOH A 98 1198 102 HOH HOH . 
H 7 HOH A 99 1199 103 HOH HOH . 
H 7 HOH A 100 1200 104 HOH HOH . 
H 7 HOH A 101 1201 105 HOH HOH . 
H 7 HOH A 102 1202 106 HOH HOH . 
H 7 HOH A 103 1203 107 HOH HOH . 
H 7 HOH A 104 1204 108 HOH HOH . 
H 7 HOH A 105 1205 109 HOH HOH . 
H 7 HOH A 106 1206 110 HOH HOH . 
H 7 HOH A 107 1207 111 HOH HOH . 
H 7 HOH A 108 1208 112 HOH HOH . 
H 7 HOH A 109 1209 113 HOH HOH . 
H 7 HOH A 110 1210 114 HOH HOH . 
H 7 HOH A 111 1211 115 HOH HOH . 
H 7 HOH A 112 1212 116 HOH HOH . 
H 7 HOH A 113 1213 117 HOH HOH . 
H 7 HOH A 114 1214 119 HOH HOH . 
H 7 HOH A 115 1215 120 HOH HOH . 
H 7 HOH A 116 1216 121 HOH HOH . 
H 7 HOH A 117 1217 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 ORO . . . D 4 -5.608 18.888 -8.993 1 39.54 ? N1 ORO 1003 A 1 
HETATM 2 C C2 ORO . . . D 4 -6.121 19.765 -8.095 1 42.73 ? C2 ORO 1003 A 1 
HETATM 3 O O2 ORO . . . D 4 -6.851 20.703 -8.483 1 45.11 ? O2 ORO 1003 A 1 
HETATM 4 N N3 ORO . . . D 4 -5.923 19.661 -6.73 1 39.43 ? N3 ORO 1003 A 1 
HETATM 5 C C4 ORO . . . D 4 -5.158 18.633 -6.266 1 42.12 ? C4 ORO 1003 A 1 
HETATM 6 O O4 ORO . . . D 4 -4.995 18.503 -5.037 1 40.14 ? O4 ORO 1003 A 1 
HETATM 7 C C5 ORO . . . D 4 -4.578 17.736 -7.138 1 40.23 ? C5 ORO 1003 A 1 
HETATM 8 C C6 ORO . . . D 4 -4.795 17.883 -8.542 1 45.91 ? C6 ORO 1003 A 1 
HETATM 9 C C7 ORO . . . D 4 -4.294 16.829 -9.487 1 45.99 ? C7 ORO 1003 A 1 
HETATM 10 O O71 ORO . . . D 4 -3.21 16.181 -9.414 1 41.64 ? O71 ORO 1003 A 1 
HETATM 11 O O72 ORO . . . D 4 -5.176 16.534 -10.339 1 46.41 ? O72 ORO 1003 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           11 
#