data_4OSG # _model_server_result.job_id KUx7Ymb3PCGjU-RZyZxC3g _model_server_result.datetime_utc '2024-11-05 13:44:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4osg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 4OSG # _exptl.entry_id 4OSG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 373.451 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-ethyl-5-{(3R)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 67.94 _cell.angle_beta 77.7 _cell.angle_gamma 75.92 _cell.entry_id 4OSG _cell.length_a 36.12 _cell.length_b 74.21 _cell.length_c 82.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,W 1 1 B,H,I,J,K,X 2 1 C,L,M,N,O,P,Q,Y 3 1 D,R,S,T,U,V,Z 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 I N N ? 3 M N N ? 3 S N N # _chem_comp.formula 'C22 H23 N5 O' _chem_comp.formula_weight 373.451 _chem_comp.id 06U _chem_comp.mon_nstd_flag . _chem_comp.name 6-ethyl-5-{(3R)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 N1 06U doub 1 n y N1 C6 06U sing 2 n y N3 C2 06U sing 3 n y NAH C2 06U sing 4 n n N3 C4 06U doub 5 n y CAI C4 06U sing 6 n n C4 C5 06U sing 7 n y C5 CAK 06U sing 8 n n C5 C6 06U doub 9 n y C6 NAJ 06U sing 10 n n CAY CAA 06U doub 11 n y CAA CAU 06U sing 12 n y CAA HAA 06U sing 13 n n NAH HNAH 06U sing 14 n n NAH HNAA 06U sing 15 n n CAZ CAI 06U sing 16 n n CAI HAI 06U sing 17 n n CAI HAIA 06U sing 18 n n NAJ HNAJ 06U sing 19 n n NAJ HNAB 06U sing 20 n n CAK CAL 06U trip 21 n n CAL CAM 06U sing 22 n n CAO CAM 06U sing 23 n n CAM CAN 06U sing 24 n n CAM HAM 06U sing 25 n n CAN HAN 06U sing 26 n n CAN HANA 06U sing 27 n n CAN HANB 06U sing 28 n n CAP CAO 06U doub 29 n y CAT CAO 06U sing 30 n y CAQ CAP 06U sing 31 n y CAP HAP 06U sing 32 n n OBA CAQ 06U sing 33 n n CAR CAQ 06U doub 34 n y CAR CAS 06U sing 35 n y CAR HAR 06U sing 36 n n CAU CAS 06U sing 37 n y CAS CAT 06U doub 38 n y CAT HAT 06U sing 39 n n CAU CAV 06U doub 40 n y CAW CAV 06U sing 41 n y CAV HAV 06U sing 42 n n NAX CAW 06U doub 43 n y CAW HAW 06U sing 44 n n CAY NAX 06U sing 45 n y CAY HAY 06U sing 46 n n CAZ HAZ 06U sing 47 n n CAZ HAZA 06U sing 48 n n CAZ HAZB 06U sing 49 n n OBA CBB 06U sing 50 n n CBB HBB 06U sing 51 n n CBB HBBA 06U sing 52 n n CBB HBBB 06U sing 53 n n # _atom_sites.entry_id 4OSG _atom_sites.fract_transf_matrix[1][1] 0.027685 _atom_sites.fract_transf_matrix[1][2] -0.006944 _atom_sites.fract_transf_matrix[1][3] -0.003899 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013893 _atom_sites.fract_transf_matrix[2][3] -0.00505 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAP A 1 401 207 NAP NAP . F 3 06U A 1 402 1 06U 06U . G 4 EOH A 1 403 1 EOH EOH . H 2 NAP B 1 401 207 NAP NAP . I 3 06U B 1 402 1 06U 06U . J 5 CAC B 1 403 1 CAC CAC . K 6 CL B 1 404 1 CL CL . L 2 NAP C 1 401 207 NAP NAP . M 3 06U C 1 402 1 06U 06U . N 7 PEG C 1 403 1 PEG PEG . O 6 CL C 1 404 1 CL CL . P 8 CA C 1 405 1 CA CA . Q 6 CL C 1 406 1 CL CL . R 2 NAP D 1 401 207 NAP NAP . S 3 06U D 1 402 1 06U 06U . T 6 CL D 1 403 1 CL CL . U 8 CA D 1 404 1 CA CA . V 5 CAC D 1 405 1 CAC CAC . W 9 HOH A 1 501 5 HOH HOH . W 9 HOH A 2 502 11 HOH HOH . W 9 HOH A 3 503 23 HOH HOH . W 9 HOH A 4 504 24 HOH HOH . W 9 HOH A 5 505 26 HOH HOH . X 9 HOH B 1 501 2 HOH HOH . Y 9 HOH C 1 501 3 HOH HOH . Y 9 HOH C 2 502 18 HOH HOH . Y 9 HOH C 3 503 21 HOH HOH . Z 9 HOH D 1 501 1 HOH HOH . Z 9 HOH D 2 502 9 HOH HOH . Z 9 HOH D 3 503 10 HOH HOH . Z 9 HOH D 4 504 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 06U . . . F 3 21.074 -57.89 -1.126 1 70.8 ? N1 06U 402 A 1 HETATM 2 C C2 06U . . . F 3 20.877 -59.127 -1.603 1 68.36 ? C2 06U 402 A 1 HETATM 3 N N3 06U . . . F 3 20.707 -60.168 -0.775 1 65.52 ? N3 06U 402 A 1 HETATM 4 C C4 06U . . . F 3 20.726 -60.006 0.554 1 70.23 ? C4 06U 402 A 1 HETATM 5 C C5 06U . . . F 3 20.925 -58.739 1.077 1 72.6 ? C5 06U 402 A 1 HETATM 6 C C6 06U . . . F 3 21.099 -57.684 0.196 1 71.63 ? C6 06U 402 A 1 HETATM 7 C CAA 06U . . . F 3 23.551 -62.528 5.391 1 97.28 ? CAA 06U 402 A 1 HETATM 8 N NAH 06U . . . F 3 20.854 -59.321 -2.916 1 67.86 ? NAH 06U 402 A 1 HETATM 9 C CAI 06U . . . F 3 20.551 -61.091 1.406 1 74.91 ? CAI 06U 402 A 1 HETATM 10 N NAJ 06U . . . F 3 21.289 -56.481 0.732 1 70.39 ? NAJ 06U 402 A 1 HETATM 11 C CAK 06U . . . F 3 20.956 -58.528 2.495 1 74.47 ? CAK 06U 402 A 1 HETATM 12 C CAL 06U . . . F 3 20.989 -58.338 3.668 1 77.99 ? CAL 06U 402 A 1 HETATM 13 C CAM 06U . . . F 3 21.011 -58.033 5.116 1 84.64 ? CAM 06U 402 A 1 HETATM 14 C CAN 06U . . . F 3 21.075 -56.521 5.265 1 85.72 ? CAN 06U 402 A 1 HETATM 15 C CAO 06U . . . F 3 22.057 -58.589 5.861 1 90.52 ? CAO 06U 402 A 1 HETATM 16 C CAP 06U . . . F 3 22.586 -57.804 6.88 1 92.61 ? CAP 06U 402 A 1 HETATM 17 C CAQ 06U . . . F 3 23.602 -58.266 7.697 1 100.36 ? CAQ 06U 402 A 1 HETATM 18 C CAR 06U . . . F 3 24.106 -59.545 7.478 1 103.04 ? CAR 06U 402 A 1 HETATM 19 C CAS 06U . . . F 3 23.602 -60.348 6.455 1 101.36 ? CAS 06U 402 A 1 HETATM 20 C CAT 06U . . . F 3 22.553 -59.877 5.655 1 95.7 ? CAT 06U 402 A 1 HETATM 21 C CAU 06U . . . F 3 24.123 -61.635 6.291 1 98.97 ? CAU 06U 402 A 1 HETATM 22 C CAV 06U . . . F 3 25.19 -62.058 7.08 1 100.69 ? CAV 06U 402 A 1 HETATM 23 C CAW 06U . . . F 3 25.714 -63.341 6.945 1 103.36 ? CAW 06U 402 A 1 HETATM 24 N NAX 06U . . . F 3 25.147 -64.232 6.028 1 95.35 ? NAX 06U 402 A 1 HETATM 25 C CAY 06U . . . F 3 24.062 -63.817 5.252 1 95.04 ? CAY 06U 402 A 1 HETATM 26 C CAZ 06U . . . F 3 19.755 -62.194 0.705 1 76.98 ? CAZ 06U 402 A 1 HETATM 27 O OBA 06U . . . F 3 24.068 -57.441 8.682 1 102.27 ? OBA 06U 402 A 1 HETATM 28 C CBB 06U . . . F 3 25.114 -57.974 9.504 1 97.61 ? CBB 06U 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #