data_4OTG # _model_server_result.job_id zf52YSYkKtGwcbParLT5-w _model_server_result.datetime_utc '2024-10-13 22:23:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4otg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 4OTG # _exptl.entry_id 4OTG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 439.463 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Lestaurtinib _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OTG _cell.length_a 56.453 _cell.length_b 73.292 _cell.length_c 94.512 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 172 A SER 779 1_555 A N TPO 173 A TPO 780 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C TPO 173 A TPO 780 1_555 A N PHE 174 A PHE 781 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale3 A C LEU 314 A LEU 921 1_555 A N SEP 315 A SEP 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C SEP 315 A SEP 922 1_555 A N PRO 316 A PRO 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? # _chem_comp.formula 'C26 H21 N3 O4' _chem_comp.formula_weight 439.463 _chem_comp.id 2V9 _chem_comp.mon_nstd_flag . _chem_comp.name Lestaurtinib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (5S,6S,8R)-6-hydroxy-6-(hydroxymethyl)-5-methyl-5,6,7,8-tetrahydro-13H-5,8-epoxy-4b,8a,14-triazadibenzo[b,h]cycloocta[1,2,3,4-jkl]cyclopenta[e]-as-indacen-13-one # _atom_sites.entry_id 4OTG _atom_sites.fract_transf_matrix[1][1] 0.017714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010581 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2V9 A 1 1001 1 2V9 MOL . C 3 HOH A 1 1101 1 HOH HOH . C 3 HOH A 2 1102 2 HOH HOH . C 3 HOH A 3 1103 3 HOH HOH . C 3 HOH A 4 1104 4 HOH HOH . C 3 HOH A 5 1105 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 2V9 . . . B 2 -9.94 6.806 -14.684 1 42.85 ? O2 2V9 1001 A 1 HETATM 2 C C25 2V9 . . . B 2 -10.913 6.926 -13.931 1 42.57 ? C25 2V9 1001 A 1 HETATM 3 N N3 2V9 . . . B 2 -11.118 6.125 -12.871 1 37.8 ? N3 2V9 1001 A 1 HETATM 4 C C24 2V9 . . . B 2 -12.374 6.505 -12.206 1 38.35 ? C24 2V9 1001 A 1 HETATM 5 C C14 2V9 . . . B 2 -12.874 7.644 -13.102 1 42.43 ? C14 2V9 1001 A 1 HETATM 6 C C13 2V9 . . . B 2 -11.947 7.856 -14.122 1 39.19 ? C13 2V9 1001 A 1 HETATM 7 C C12 2V9 . . . B 2 -12.197 8.867 -15.065 1 40.85 ? C12 2V9 1001 A 1 HETATM 8 C C11 2V9 . . . B 2 -11.539 9.356 -16.203 1 39.17 ? C11 2V9 1001 A 1 HETATM 9 C C10 2V9 . . . B 2 -10.347 9.008 -16.837 1 35.67 ? C10 2V9 1001 A 1 HETATM 10 C C9 2V9 . . . B 2 -9.953 9.686 -17.988 1 36.25 ? C9 2V9 1001 A 1 HETATM 11 C C8 2V9 . . . B 2 -10.745 10.706 -18.517 1 35 ? C8 2V9 1001 A 1 HETATM 12 C C7 2V9 . . . B 2 -11.938 11.056 -17.892 1 36.39 ? C7 2V9 1001 A 1 HETATM 13 C C6 2V9 . . . B 2 -12.333 10.379 -16.738 1 40.17 ? C6 2V9 1001 A 1 HETATM 14 N N1 2V9 . . . B 2 -13.401 10.495 -15.947 1 42.49 ? N1 2V9 1001 A 1 HETATM 15 C C23 2V9 . . . B 2 -13.362 9.621 -14.956 1 41.89 ? C23 2V9 1001 A 1 HETATM 16 C C22 2V9 . . . B 2 -14.272 9.404 -13.935 1 43.43 ? C22 2V9 1001 A 1 HETATM 17 C C15 2V9 . . . B 2 -14.035 8.412 -12.997 1 43.59 ? C15 2V9 1001 A 1 HETATM 18 C C16 2V9 . . . B 2 -15.121 8.427 -12.13 1 39.5 ? C16 2V9 1001 A 1 HETATM 19 C C17 2V9 . . . B 2 -15.439 7.655 -11.02 1 38.93 ? C17 2V9 1001 A 1 HETATM 20 C C18 2V9 . . . B 2 -16.63 7.887 -10.341 1 41.39 ? C18 2V9 1001 A 1 HETATM 21 C C19 2V9 . . . B 2 -17.503 8.883 -10.78 1 39.22 ? C19 2V9 1001 A 1 HETATM 22 C C20 2V9 . . . B 2 -17.183 9.652 -11.895 1 41.33 ? C20 2V9 1001 A 1 HETATM 23 C C21 2V9 . . . B 2 -15.988 9.428 -12.574 1 40.68 ? C21 2V9 1001 A 1 HETATM 24 N N2 2V9 . . . B 2 -15.437 9.99 -13.659 1 43.72 ? N2 2V9 1001 A 1 HETATM 25 C C2 2V9 . . . B 2 -15.901 11.253 -14.285 1 47.47 ? C2 2V9 1001 A 1 HETATM 26 C C1 2V9 . . . B 2 -16.656 12.114 -13.262 1 41.65 ? C1 2V9 1001 A 1 HETATM 27 O O1 2V9 . . . B 2 -14.816 12.03 -14.818 1 47.2 ? O1 2V9 1001 A 1 HETATM 28 C C5 2V9 . . . B 2 -14.479 11.476 -16.115 1 46.93 ? C5 2V9 1001 A 1 HETATM 29 C C4 2V9 . . . B 2 -15.758 10.836 -16.667 1 48.62 ? C4 2V9 1001 A 1 HETATM 30 C C3 2V9 . . . B 2 -16.765 10.928 -15.513 1 54.66 ? C3 2V9 1001 A 1 HETATM 31 O O4 2V9 . . . B 2 -17.418 9.665 -15.33 1 59.08 ? O4 2V9 1001 A 1 HETATM 32 C C26 2V9 . . . B 2 -17.807 12.011 -15.808 1 53.87 ? C26 2V9 1001 A 1 HETATM 33 O O3 2V9 . . . B 2 -17.15 13.283 -15.897 1 68.76 ? O3 2V9 1001 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 33 #