data_4OTI # _model_server_result.job_id 39XpTH0_UxsBng0YZYlrdg _model_server_result.datetime_utc '2024-10-13 20:27:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 4OTI # _exptl.entry_id 4OTI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 312.37 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-{(3R,4R)-4-methyl-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}-3-oxopropanenitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OTI _cell.length_a 56.281 _cell.length_b 72.486 _cell.length_c 94.481 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OTI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 314 A LEU 921 1_555 A N SEP 315 A SEP 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C SEP 315 A SEP 922 1_555 A N PRO 316 A PRO 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'C16 H20 N6 O' _chem_comp.formula_weight 312.37 _chem_comp.id MI1 _chem_comp.mon_nstd_flag . _chem_comp.name 3-{(3R,4R)-4-methyl-3-[methyl(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]piperidin-1-yl}-3-oxopropanenitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms CP-690,550 # _atom_sites.entry_id 4OTI _atom_sites.fract_transf_matrix[1][1] 0.017768 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013796 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010584 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MI1 A 1 1001 1 MI1 MOL . C 3 HOH A 1 1101 1 HOH HOH . C 3 HOH A 2 1102 2 HOH HOH . C 3 HOH A 3 1103 3 HOH HOH . C 3 HOH A 4 1104 4 HOH HOH . C 3 HOH A 5 1105 5 HOH HOH . C 3 HOH A 6 1106 6 HOH HOH . C 3 HOH A 7 1107 7 HOH HOH . C 3 HOH A 8 1108 8 HOH HOH . C 3 HOH A 9 1109 9 HOH HOH . C 3 HOH A 10 1110 10 HOH HOH . C 3 HOH A 11 1111 11 HOH HOH . C 3 HOH A 12 1112 12 HOH HOH . C 3 HOH A 13 1113 13 HOH HOH . C 3 HOH A 14 1114 14 HOH HOH . C 3 HOH A 15 1115 15 HOH HOH . C 3 HOH A 16 1116 16 HOH HOH . C 3 HOH A 17 1117 17 HOH HOH . C 3 HOH A 18 1118 18 HOH HOH . C 3 HOH A 19 1119 19 HOH HOH . C 3 HOH A 20 1120 20 HOH HOH . C 3 HOH A 21 1121 21 HOH HOH . C 3 HOH A 22 1122 22 HOH HOH . C 3 HOH A 23 1123 23 HOH HOH . C 3 HOH A 24 1124 24 HOH HOH . C 3 HOH A 25 1125 25 HOH HOH . C 3 HOH A 26 1126 26 HOH HOH . C 3 HOH A 27 1127 27 HOH HOH . C 3 HOH A 28 1128 28 HOH HOH . C 3 HOH A 29 1129 29 HOH HOH . C 3 HOH A 30 1130 30 HOH HOH . C 3 HOH A 31 1131 31 HOH HOH . C 3 HOH A 32 1132 32 HOH HOH . C 3 HOH A 33 1133 33 HOH HOH . C 3 HOH A 34 1134 34 HOH HOH . C 3 HOH A 35 1135 35 HOH HOH . C 3 HOH A 36 1136 36 HOH HOH . C 3 HOH A 37 1137 37 HOH HOH . C 3 HOH A 38 1138 38 HOH HOH . C 3 HOH A 39 1139 39 HOH HOH . C 3 HOH A 40 1140 40 HOH HOH . C 3 HOH A 41 1141 41 HOH HOH . C 3 HOH A 42 1142 42 HOH HOH . C 3 HOH A 43 1143 44 HOH HOH . C 3 HOH A 44 1144 45 HOH HOH . C 3 HOH A 45 1145 46 HOH HOH . C 3 HOH A 46 1146 47 HOH HOH . C 3 HOH A 47 1147 48 HOH HOH . C 3 HOH A 48 1148 49 HOH HOH . C 3 HOH A 49 1149 50 HOH HOH . C 3 HOH A 50 1150 51 HOH HOH . C 3 HOH A 51 1151 53 HOH HOH . C 3 HOH A 52 1152 54 HOH HOH . C 3 HOH A 53 1153 55 HOH HOH . C 3 HOH A 54 1154 57 HOH HOH . C 3 HOH A 55 1155 58 HOH HOH . C 3 HOH A 56 1156 59 HOH HOH . C 3 HOH A 57 1157 60 HOH HOH . C 3 HOH A 58 1158 61 HOH HOH . C 3 HOH A 59 1159 62 HOH HOH . C 3 HOH A 60 1160 63 HOH HOH . C 3 HOH A 61 1161 64 HOH HOH . C 3 HOH A 62 1162 65 HOH HOH . C 3 HOH A 63 1163 66 HOH HOH . C 3 HOH A 64 1164 67 HOH HOH . C 3 HOH A 65 1165 68 HOH HOH . C 3 HOH A 66 1166 69 HOH HOH . C 3 HOH A 67 1167 70 HOH HOH . C 3 HOH A 68 1168 71 HOH HOH . C 3 HOH A 69 1169 72 HOH HOH . C 3 HOH A 70 1170 73 HOH HOH . C 3 HOH A 71 1171 74 HOH HOH . C 3 HOH A 72 1172 75 HOH HOH . C 3 HOH A 73 1173 76 HOH HOH . C 3 HOH A 74 1174 77 HOH HOH . C 3 HOH A 75 1175 78 HOH HOH . C 3 HOH A 76 1176 79 HOH HOH . C 3 HOH A 77 1177 80 HOH HOH . C 3 HOH A 78 1178 81 HOH HOH . C 3 HOH A 79 1179 82 HOH HOH . C 3 HOH A 80 1180 83 HOH HOH . C 3 HOH A 81 1181 84 HOH HOH . C 3 HOH A 82 1182 85 HOH HOH . C 3 HOH A 83 1183 86 HOH HOH . C 3 HOH A 84 1184 87 HOH HOH . C 3 HOH A 85 1185 88 HOH HOH . C 3 HOH A 86 1186 89 HOH HOH . C 3 HOH A 87 1187 90 HOH HOH . C 3 HOH A 88 1188 91 HOH HOH . C 3 HOH A 89 1189 92 HOH HOH . C 3 HOH A 90 1190 93 HOH HOH . C 3 HOH A 91 1191 95 HOH HOH . C 3 HOH A 92 1192 96 HOH HOH . C 3 HOH A 93 1193 97 HOH HOH . C 3 HOH A 94 1194 98 HOH HOH . C 3 HOH A 95 1195 99 HOH HOH . C 3 HOH A 96 1196 100 HOH HOH . C 3 HOH A 97 1197 101 HOH HOH . C 3 HOH A 98 1198 102 HOH HOH . C 3 HOH A 99 1199 103 HOH HOH . C 3 HOH A 100 1200 105 HOH HOH . C 3 HOH A 101 1201 106 HOH HOH . C 3 HOH A 102 1202 107 HOH HOH . C 3 HOH A 103 1203 108 HOH HOH . C 3 HOH A 104 1204 109 HOH HOH . C 3 HOH A 105 1205 110 HOH HOH . C 3 HOH A 106 1206 111 HOH HOH . C 3 HOH A 107 1207 112 HOH HOH . C 3 HOH A 108 1208 113 HOH HOH . C 3 HOH A 109 1209 114 HOH HOH . C 3 HOH A 110 1210 115 HOH HOH . C 3 HOH A 111 1211 116 HOH HOH . C 3 HOH A 112 1212 117 HOH HOH . C 3 HOH A 113 1213 118 HOH HOH . C 3 HOH A 114 1214 119 HOH HOH . C 3 HOH A 115 1215 120 HOH HOH . C 3 HOH A 116 1216 121 HOH HOH . C 3 HOH A 117 1217 122 HOH HOH . C 3 HOH A 118 1218 123 HOH HOH . C 3 HOH A 119 1219 124 HOH HOH . C 3 HOH A 120 1220 125 HOH HOH . C 3 HOH A 121 1221 126 HOH HOH . C 3 HOH A 122 1222 127 HOH HOH . C 3 HOH A 123 1223 128 HOH HOH . C 3 HOH A 124 1224 129 HOH HOH . C 3 HOH A 125 1225 130 HOH HOH . C 3 HOH A 126 1226 131 HOH HOH . C 3 HOH A 127 1227 132 HOH HOH . C 3 HOH A 128 1228 133 HOH HOH . C 3 HOH A 129 1229 134 HOH HOH . C 3 HOH A 130 1230 135 HOH HOH . C 3 HOH A 131 1231 136 HOH HOH . C 3 HOH A 132 1232 137 HOH HOH . C 3 HOH A 133 1233 138 HOH HOH . C 3 HOH A 134 1234 139 HOH HOH . C 3 HOH A 135 1235 140 HOH HOH . C 3 HOH A 136 1236 141 HOH HOH . C 3 HOH A 137 1237 142 HOH HOH . C 3 HOH A 138 1238 143 HOH HOH . C 3 HOH A 139 1239 144 HOH HOH . C 3 HOH A 140 1240 145 HOH HOH . C 3 HOH A 141 1241 146 HOH HOH . C 3 HOH A 142 1242 147 HOH HOH . C 3 HOH A 143 1243 148 HOH HOH . C 3 HOH A 144 1244 149 HOH HOH . C 3 HOH A 145 1245 150 HOH HOH . C 3 HOH A 146 1246 151 HOH HOH . C 3 HOH A 147 1247 152 HOH HOH . C 3 HOH A 148 1248 153 HOH HOH . C 3 HOH A 149 1249 154 HOH HOH . C 3 HOH A 150 1250 155 HOH HOH . C 3 HOH A 151 1251 156 HOH HOH . C 3 HOH A 152 1252 157 HOH HOH . C 3 HOH A 153 1253 158 HOH HOH . C 3 HOH A 154 1254 159 HOH HOH . C 3 HOH A 155 1255 160 HOH HOH . C 3 HOH A 156 1256 161 HOH HOH . C 3 HOH A 157 1257 162 HOH HOH . C 3 HOH A 158 1258 163 HOH HOH . C 3 HOH A 159 1259 164 HOH HOH . C 3 HOH A 160 1260 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MI1 . . . B 2 -15.325 9.06 -13.27 1 23.71 ? C1 MI1 1001 A 1 HETATM 2 C C2 MI1 . . . B 2 -16.095 10.384 -13.178 1 24.84 ? C2 MI1 1001 A 1 HETATM 3 C C4 MI1 . . . B 2 -18.091 9.107 -12.163 1 32.85 ? C4 MI1 1001 A 1 HETATM 4 C C5 MI1 . . . B 2 -17.369 7.789 -12.508 1 30.62 ? C5 MI1 1001 A 1 HETATM 5 C C6 MI1 . . . B 2 -16.3 7.925 -13.611 1 23.26 ? C6 MI1 1001 A 1 HETATM 6 N N3 MI1 . . . B 2 -17.167 10.278 -12.151 1 29.51 ? N3 MI1 1001 A 1 HETATM 7 O O21 MI1 . . . B 2 -16.56 12.213 -11.235 1 33.26 ? O21 MI1 1001 A 1 HETATM 8 C C20 MI1 . . . B 2 -17.311 11.237 -11.231 1 33.01 ? C20 MI1 1001 A 1 HETATM 9 C C22 MI1 . . . B 2 -18.403 11.128 -10.165 1 30.78 ? C22 MI1 1001 A 1 HETATM 10 C C23 MI1 . . . B 2 -17.991 11.868 -8.969 1 35.74 ? C23 MI1 1001 A 1 HETATM 11 N N24 MI1 . . . B 2 -17.651 12.464 -8.057 1 40.35 ? N24 MI1 1001 A 1 HETATM 12 C C7 MI1 . . . B 2 -16.934 8.076 -15 1 32.06 ? C7 MI1 1001 A 1 HETATM 13 N N8 MI1 . . . B 2 -14.198 9.174 -14.222 1 21.62 ? N8 MI1 1001 A 1 HETATM 14 C C9 MI1 . . . B 2 -14.113 10.278 -15.196 1 30.26 ? C9 MI1 1001 A 1 HETATM 15 C C10 MI1 . . . B 2 -13.165 8.311 -14.243 1 21.89 ? C10 MI1 1001 A 1 HETATM 16 C C15 MI1 . . . B 2 -12.89 7.359 -13.247 1 20.53 ? C15 MI1 1001 A 1 HETATM 17 C C16 MI1 . . . B 2 -13.467 7.008 -12.096 1 22.63 ? C16 MI1 1001 A 1 HETATM 18 C C11 MI1 . . . B 2 -12.76 6.011 -11.552 1 21.33 ? C11 MI1 1001 A 1 HETATM 19 N N12 MI1 . . . B 2 -11.734 5.717 -12.357 1 18.85 ? N12 MI1 1001 A 1 HETATM 20 C C14 MI1 . . . B 2 -11.783 6.536 -13.403 1 18.66 ? C14 MI1 1001 A 1 HETATM 21 N N17 MI1 . . . B 2 -11.002 6.668 -14.486 1 18.33 ? N17 MI1 1001 A 1 HETATM 22 C C18 MI1 . . . B 2 -11.28 7.575 -15.411 1 19.9 ? C18 MI1 1001 A 1 HETATM 23 N N19 MI1 . . . B 2 -12.327 8.382 -15.293 1 22.35 ? N19 MI1 1001 A 1 # _model_server_stats.io_time_ms 94 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 23 #