data_4OTN # _model_server_result.job_id 5KzdM82_vX9uayY1xVhjKg _model_server_result.datetime_utc '2024-12-22 06:04:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4otn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1703}' # _entry.id 4OTN # _exptl.entry_id 4OTN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4OTN _cell.length_a 85.494 _cell.length_b 85.494 _cell.length_c 73.041 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OTN _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4OTN _atom_sites.fract_transf_matrix[1][1] 0.011697 _atom_sites.fract_transf_matrix[1][2] 0.006753 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1701 3 SO4 SO4 . D 2 SO4 A 1 1702 4 SO4 SO4 . E 3 EDO A 1 1703 1 EDO EDO . F 3 EDO A 1 1704 6 EDO EDO . G 3 EDO B 1 1701 2 EDO EDO . H 3 EDO B 1 1702 3 EDO EDO . I 3 EDO B 1 1703 4 EDO EDO . J 3 EDO B 1 1704 5 EDO EDO . K 3 EDO B 1 1705 7 EDO EDO . L 4 HOH A 1 1801 1 HOH HOH . L 4 HOH A 2 1802 4 HOH HOH . L 4 HOH A 3 1803 5 HOH HOH . L 4 HOH A 4 1804 11 HOH HOH . L 4 HOH A 5 1805 14 HOH HOH . L 4 HOH A 6 1806 15 HOH HOH . L 4 HOH A 7 1807 19 HOH HOH . L 4 HOH A 8 1808 23 HOH HOH . L 4 HOH A 9 1809 26 HOH HOH . L 4 HOH A 10 1810 27 HOH HOH . L 4 HOH A 11 1811 30 HOH HOH . L 4 HOH A 12 1812 31 HOH HOH . L 4 HOH A 13 1813 34 HOH HOH . L 4 HOH A 14 1814 35 HOH HOH . L 4 HOH A 15 1815 36 HOH HOH . L 4 HOH A 16 1816 40 HOH HOH . L 4 HOH A 17 1817 41 HOH HOH . L 4 HOH A 18 1818 50 HOH HOH . L 4 HOH A 19 1819 51 HOH HOH . L 4 HOH A 20 1820 53 HOH HOH . L 4 HOH A 21 1821 54 HOH HOH . L 4 HOH A 22 1822 63 HOH HOH . L 4 HOH A 23 1823 73 HOH HOH . L 4 HOH A 24 1824 79 HOH HOH . L 4 HOH A 25 1825 80 HOH HOH . L 4 HOH A 26 1826 83 HOH HOH . L 4 HOH A 27 1827 84 HOH HOH . L 4 HOH A 28 1828 87 HOH HOH . L 4 HOH A 29 1829 88 HOH HOH . L 4 HOH A 30 1830 89 HOH HOH . L 4 HOH A 31 1831 90 HOH HOH . L 4 HOH A 32 1832 91 HOH HOH . L 4 HOH A 33 1833 93 HOH HOH . L 4 HOH A 34 1834 95 HOH HOH . L 4 HOH A 35 1835 96 HOH HOH . L 4 HOH A 36 1836 105 HOH HOH . L 4 HOH A 37 1837 110 HOH HOH . L 4 HOH A 38 1838 114 HOH HOH . L 4 HOH A 39 1839 115 HOH HOH . L 4 HOH A 40 1840 116 HOH HOH . L 4 HOH A 41 1841 117 HOH HOH . L 4 HOH A 42 1842 118 HOH HOH . L 4 HOH A 43 1843 119 HOH HOH . L 4 HOH A 44 1844 121 HOH HOH . L 4 HOH A 45 1845 122 HOH HOH . L 4 HOH A 46 1846 123 HOH HOH . L 4 HOH A 47 1847 124 HOH HOH . L 4 HOH A 48 1848 126 HOH HOH . L 4 HOH A 49 1849 135 HOH HOH . L 4 HOH A 50 1850 136 HOH HOH . L 4 HOH A 51 1851 153 HOH HOH . L 4 HOH A 52 1852 154 HOH HOH . L 4 HOH A 53 1853 165 HOH HOH . L 4 HOH A 54 1854 166 HOH HOH . L 4 HOH A 55 1855 167 HOH HOH . L 4 HOH A 56 1856 177 HOH HOH . L 4 HOH A 57 1857 178 HOH HOH . L 4 HOH A 58 1858 179 HOH HOH . L 4 HOH A 59 1859 180 HOH HOH . L 4 HOH A 60 1860 187 HOH HOH . L 4 HOH A 61 1861 189 HOH HOH . L 4 HOH A 62 1862 199 HOH HOH . L 4 HOH A 63 1863 201 HOH HOH . L 4 HOH A 64 1864 204 HOH HOH . L 4 HOH A 65 1865 205 HOH HOH . L 4 HOH A 66 1866 217 HOH HOH . L 4 HOH A 67 1867 226 HOH HOH . L 4 HOH A 68 1868 227 HOH HOH . L 4 HOH A 69 1869 229 HOH HOH . L 4 HOH A 70 1870 231 HOH HOH . L 4 HOH A 71 1871 232 HOH HOH . L 4 HOH A 72 1872 233 HOH HOH . L 4 HOH A 73 1873 234 HOH HOH . L 4 HOH A 74 1874 235 HOH HOH . L 4 HOH A 75 1875 237 HOH HOH . L 4 HOH A 76 1876 240 HOH HOH . L 4 HOH A 77 1877 259 HOH HOH . L 4 HOH A 78 1878 263 HOH HOH . L 4 HOH A 79 1879 264 HOH HOH . M 4 HOH B 1 1801 2 HOH HOH . M 4 HOH B 2 1802 9 HOH HOH . M 4 HOH B 3 1803 10 HOH HOH . M 4 HOH B 4 1804 12 HOH HOH . M 4 HOH B 5 1805 16 HOH HOH . M 4 HOH B 6 1806 17 HOH HOH . M 4 HOH B 7 1807 28 HOH HOH . M 4 HOH B 8 1808 29 HOH HOH . M 4 HOH B 9 1809 32 HOH HOH . M 4 HOH B 10 1810 37 HOH HOH . M 4 HOH B 11 1811 42 HOH HOH . M 4 HOH B 12 1812 43 HOH HOH . M 4 HOH B 13 1813 45 HOH HOH . M 4 HOH B 14 1814 47 HOH HOH . M 4 HOH B 15 1815 48 HOH HOH . M 4 HOH B 16 1816 49 HOH HOH . M 4 HOH B 17 1817 55 HOH HOH . M 4 HOH B 18 1818 57 HOH HOH . M 4 HOH B 19 1819 58 HOH HOH . M 4 HOH B 20 1820 61 HOH HOH . M 4 HOH B 21 1821 67 HOH HOH . M 4 HOH B 22 1822 70 HOH HOH . M 4 HOH B 23 1823 92 HOH HOH . M 4 HOH B 24 1824 97 HOH HOH . M 4 HOH B 25 1825 99 HOH HOH . M 4 HOH B 26 1826 102 HOH HOH . M 4 HOH B 27 1827 103 HOH HOH . M 4 HOH B 28 1828 104 HOH HOH . M 4 HOH B 29 1829 125 HOH HOH . M 4 HOH B 30 1830 127 HOH HOH . M 4 HOH B 31 1831 128 HOH HOH . M 4 HOH B 32 1832 129 HOH HOH . M 4 HOH B 33 1833 133 HOH HOH . M 4 HOH B 34 1834 140 HOH HOH . M 4 HOH B 35 1835 141 HOH HOH . M 4 HOH B 36 1836 142 HOH HOH . M 4 HOH B 37 1837 143 HOH HOH . M 4 HOH B 38 1838 144 HOH HOH . M 4 HOH B 39 1839 146 HOH HOH . M 4 HOH B 40 1840 147 HOH HOH . M 4 HOH B 41 1841 148 HOH HOH . M 4 HOH B 42 1842 149 HOH HOH . M 4 HOH B 43 1843 150 HOH HOH . M 4 HOH B 44 1844 151 HOH HOH . M 4 HOH B 45 1845 152 HOH HOH . M 4 HOH B 46 1846 160 HOH HOH . M 4 HOH B 47 1847 161 HOH HOH . M 4 HOH B 48 1848 168 HOH HOH . M 4 HOH B 49 1849 169 HOH HOH . M 4 HOH B 50 1850 170 HOH HOH . M 4 HOH B 51 1851 171 HOH HOH . M 4 HOH B 52 1852 173 HOH HOH . M 4 HOH B 53 1853 175 HOH HOH . M 4 HOH B 54 1854 176 HOH HOH . M 4 HOH B 55 1855 181 HOH HOH . M 4 HOH B 56 1856 182 HOH HOH . M 4 HOH B 57 1857 183 HOH HOH . M 4 HOH B 58 1858 184 HOH HOH . M 4 HOH B 59 1859 195 HOH HOH . M 4 HOH B 60 1860 197 HOH HOH . M 4 HOH B 61 1861 203 HOH HOH . M 4 HOH B 62 1862 208 HOH HOH . M 4 HOH B 63 1863 209 HOH HOH . M 4 HOH B 64 1864 210 HOH HOH . M 4 HOH B 65 1865 211 HOH HOH . M 4 HOH B 66 1866 212 HOH HOH . M 4 HOH B 67 1867 213 HOH HOH . M 4 HOH B 68 1868 215 HOH HOH . M 4 HOH B 69 1869 216 HOH HOH . M 4 HOH B 70 1870 218 HOH HOH . M 4 HOH B 71 1871 219 HOH HOH . M 4 HOH B 72 1872 221 HOH HOH . M 4 HOH B 73 1873 225 HOH HOH . M 4 HOH B 74 1874 230 HOH HOH . M 4 HOH B 75 1875 238 HOH HOH . M 4 HOH B 76 1876 239 HOH HOH . M 4 HOH B 77 1877 241 HOH HOH . M 4 HOH B 78 1878 242 HOH HOH . M 4 HOH B 79 1879 243 HOH HOH . M 4 HOH B 80 1880 244 HOH HOH . M 4 HOH B 81 1881 245 HOH HOH . M 4 HOH B 82 1882 246 HOH HOH . M 4 HOH B 83 1883 247 HOH HOH . M 4 HOH B 84 1884 251 HOH HOH . M 4 HOH B 85 1885 252 HOH HOH . M 4 HOH B 86 1886 253 HOH HOH . M 4 HOH B 87 1887 254 HOH HOH . M 4 HOH B 88 1888 255 HOH HOH . M 4 HOH B 89 1889 256 HOH HOH . M 4 HOH B 90 1890 261 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 -31.939 25.932 13.41 1 35.03 ? C1 EDO 1703 A 1 HETATM 2 O O1 EDO . . . E 3 -31.14 24.781 13.069 1 32.41 ? O1 EDO 1703 A 1 HETATM 3 C C2 EDO . . . E 3 -31.329 27.206 12.821 1 41.81 ? C2 EDO 1703 A 1 HETATM 4 O O2 EDO . . . E 3 -31.127 27.09 11.4 1 33.94 ? O2 EDO 1703 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #