data_4OUD # _model_server_result.job_id zgFX7snwaQxeU6cJUA4Pkw _model_server_result.datetime_utc '2024-12-25 07:07:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 4OUD # _exptl.entry_id 4OUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 181.189 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TYROSINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.65 _cell.angle_gamma 90 _cell.entry_id 4OUD _cell.length_a 81.34 _cell.length_b 67.205 _cell.length_c 90.682 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 303 A VAL 302 1_555 A N BIF 304 A BIF 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale2 A C BIF 304 A BIF 303 1_555 A N ALA 305 A ALA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale3 B C VAL 303 B VAL 302 1_555 B N BIF 304 B BIF 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale4 B C BIF 304 B BIF 303 1_555 B N ALA 305 B ALA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C9 H11 N O3' _chem_comp.formula_weight 181.189 _chem_comp.id TYR _chem_comp.mon_nstd_flag y _chem_comp.name TYROSINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TYR sing 368 n n N H TYR sing 369 n n N H2 TYR sing 370 n n CA C TYR sing 371 n n CA CB TYR sing 372 n n CA HA TYR sing 373 n n C O TYR doub 374 n n C OXT TYR sing 375 n n CB CG TYR sing 376 n n CB HB2 TYR sing 377 n n CB HB3 TYR sing 378 n n CG CD1 TYR doub 379 n y CG CD2 TYR sing 380 n y CD1 CE1 TYR sing 381 n y CD1 HD1 TYR sing 382 n n CD2 CE2 TYR doub 383 n y CD2 HD2 TYR sing 384 n n CE1 CZ TYR doub 385 n y CE1 HE1 TYR sing 386 n n CE2 CZ TYR sing 387 n y CE2 HE2 TYR sing 388 n n CZ OH TYR sing 389 n n OH HH TYR sing 390 n n OXT HXT TYR sing 391 n n # _atom_sites.entry_id 4OUD _atom_sites.fract_transf_matrix[1][1] 0.012294 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002759 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01488 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TYR A 1 501 501 TYR TYR . D 4 HOH A 1 601 601 HOH HOH . D 4 HOH A 2 602 602 HOH HOH . D 4 HOH A 3 603 603 HOH HOH . D 4 HOH A 4 604 604 HOH HOH . D 4 HOH A 5 605 605 HOH HOH . D 4 HOH A 6 606 606 HOH HOH . D 4 HOH A 7 607 607 HOH HOH . D 4 HOH A 8 608 608 HOH HOH . D 4 HOH A 9 609 609 HOH HOH . D 4 HOH A 10 610 610 HOH HOH . D 4 HOH A 11 611 611 HOH HOH . D 4 HOH A 12 612 612 HOH HOH . D 4 HOH A 13 613 613 HOH HOH . D 4 HOH A 14 614 614 HOH HOH . D 4 HOH A 15 615 615 HOH HOH . D 4 HOH A 16 616 616 HOH HOH . D 4 HOH A 17 617 617 HOH HOH . D 4 HOH A 18 618 618 HOH HOH . D 4 HOH A 19 619 619 HOH HOH . D 4 HOH A 20 620 620 HOH HOH . D 4 HOH A 21 621 621 HOH HOH . D 4 HOH A 22 622 622 HOH HOH . D 4 HOH A 23 623 623 HOH HOH . D 4 HOH A 24 624 624 HOH HOH . D 4 HOH A 25 625 625 HOH HOH . D 4 HOH A 26 626 626 HOH HOH . D 4 HOH A 27 627 627 HOH HOH . D 4 HOH A 28 628 628 HOH HOH . D 4 HOH A 29 629 629 HOH HOH . D 4 HOH A 30 630 630 HOH HOH . D 4 HOH A 31 631 631 HOH HOH . D 4 HOH A 32 632 632 HOH HOH . D 4 HOH A 33 633 633 HOH HOH . D 4 HOH A 34 634 634 HOH HOH . D 4 HOH A 35 635 635 HOH HOH . D 4 HOH A 36 636 636 HOH HOH . D 4 HOH A 37 637 512 HOH HOH . E 4 HOH B 1 501 501 HOH HOH . E 4 HOH B 2 502 502 HOH HOH . E 4 HOH B 3 503 503 HOH HOH . E 4 HOH B 4 504 504 HOH HOH . E 4 HOH B 5 505 505 HOH HOH . E 4 HOH B 6 506 506 HOH HOH . E 4 HOH B 7 507 507 HOH HOH . E 4 HOH B 8 508 508 HOH HOH . E 4 HOH B 9 509 509 HOH HOH . E 4 HOH B 10 510 510 HOH HOH . E 4 HOH B 11 511 511 HOH HOH . E 4 HOH B 12 512 513 HOH HOH . E 4 HOH B 13 513 514 HOH HOH . E 4 HOH B 14 514 515 HOH HOH . E 4 HOH B 15 515 516 HOH HOH . E 4 HOH B 16 516 517 HOH HOH . E 4 HOH B 17 517 518 HOH HOH . E 4 HOH B 18 518 519 HOH HOH . E 4 HOH B 19 519 520 HOH HOH . E 4 HOH B 20 520 521 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TYR . . . C 3 80.623 6.782 86.68 1 52.28 ? N TYR 501 A 1 HETATM 2 C CA TYR . . . C 3 81.514 6.385 87.824 1 54.5 ? CA TYR 501 A 1 HETATM 3 C C TYR . . . C 3 82.893 7.082 87.714 1 59.19 ? C TYR 501 A 1 HETATM 4 O O TYR . . . C 3 83.414 7.267 86.601 1 61.65 ? O TYR 501 A 1 HETATM 5 C CB TYR . . . C 3 81.667 4.848 87.898 1 51.79 ? CB TYR 501 A 1 HETATM 6 C CG TYR . . . C 3 80.343 4.076 87.863 1 51.82 ? CG TYR 501 A 1 HETATM 7 C CD1 TYR . . . C 3 79.366 4.306 88.816 1 51.53 ? CD1 TYR 501 A 1 HETATM 8 C CD2 TYR . . . C 3 80.076 3.113 86.881 1 51.64 ? CD2 TYR 501 A 1 HETATM 9 C CE1 TYR . . . C 3 78.171 3.608 88.801 1 51.24 ? CE1 TYR 501 A 1 HETATM 10 C CE2 TYR . . . C 3 78.866 2.414 86.852 1 50.84 ? CE2 TYR 501 A 1 HETATM 11 C CZ TYR . . . C 3 77.903 2.67 87.818 1 49.19 ? CZ TYR 501 A 1 HETATM 12 O OH TYR . . . C 3 76.667 2.032 87.85 1 38 ? OH TYR 501 A 1 HETATM 13 O OXT TYR . . . C 3 83.509 7.495 88.713 1 53.63 ? OXT TYR 501 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #