data_4OVX # _model_server_result.job_id w7bOfVcfxEoLTYJmITWi7g _model_server_result.datetime_utc '2025-07-03 08:05:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ovx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4OVX # _exptl.entry_id 4OVX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OVX _cell.length_a 88.305 _cell.length_b 88.305 _cell.length_c 132.907 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OVX _symmetry.cell_setting . _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 30 A PRO 66 1_555 A N MSE 31 A MSE 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 31 A MSE 67 1_555 A N ASP 32 A ASP 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C ILE 80 A ILE 116 1_555 A N MSE 81 A MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 A C MSE 81 A MSE 117 1_555 A N CYS 82 A CYS 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale5 A C VAL 171 A VAL 207 1_555 A N MSE 172 A MSE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale6 A C MSE 172 A MSE 208 1_555 A N LYS 173 A LYS 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale7 A C GLU 195 A GLU 231 1_555 A N MSE 196 A MSE 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C MSE 196 A MSE 232 1_555 A N TYR 197 A TYR 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale9 A C LEU 206 A LEU 242 1_555 A N MSE 207 A MSE 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 A C MSE 207 A MSE 243 1_555 A N PRO 208 A PRO 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale11 A C LYS 233 A LYS 269 1_555 A N MSE 234 A MSE 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale12 A C MSE 234 A MSE 270 1_555 A N MSE 235 A MSE 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale13 A C MSE 235 A MSE 271 1_555 A N LYS 236 A LYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale14 A C GLU 275 A GLU 311 1_555 A N MSE 276 A MSE 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale15 A C MSE 276 A MSE 312 1_555 A N ALA 277 A ALA 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4OVX _atom_sites.fract_transf_matrix[1][1] 0.011324 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 401 EDO EDO . C 2 EDO A 1 402 402 EDO EDO . D 2 EDO A 1 403 403 EDO EDO . E 3 HOH A 1 501 88 HOH HOH . E 3 HOH A 2 502 122 HOH HOH . E 3 HOH A 3 503 119 HOH HOH . E 3 HOH A 4 504 186 HOH HOH . E 3 HOH A 5 505 79 HOH HOH . E 3 HOH A 6 506 165 HOH HOH . E 3 HOH A 7 507 21 HOH HOH . E 3 HOH A 8 508 67 HOH HOH . E 3 HOH A 9 509 57 HOH HOH . E 3 HOH A 10 510 52 HOH HOH . E 3 HOH A 11 511 143 HOH HOH . E 3 HOH A 12 512 59 HOH HOH . E 3 HOH A 13 513 33 HOH HOH . E 3 HOH A 14 514 120 HOH HOH . E 3 HOH A 15 515 71 HOH HOH . E 3 HOH A 16 516 78 HOH HOH . E 3 HOH A 17 517 41 HOH HOH . E 3 HOH A 18 518 141 HOH HOH . E 3 HOH A 19 519 193 HOH HOH . E 3 HOH A 20 520 102 HOH HOH . E 3 HOH A 21 521 54 HOH HOH . E 3 HOH A 22 522 50 HOH HOH . E 3 HOH A 23 523 167 HOH HOH . E 3 HOH A 24 524 139 HOH HOH . E 3 HOH A 25 525 25 HOH HOH . E 3 HOH A 26 526 104 HOH HOH . E 3 HOH A 27 527 160 HOH HOH . E 3 HOH A 28 528 3 HOH HOH . E 3 HOH A 29 529 91 HOH HOH . E 3 HOH A 30 530 144 HOH HOH . E 3 HOH A 31 531 180 HOH HOH . E 3 HOH A 32 532 74 HOH HOH . E 3 HOH A 33 533 111 HOH HOH . E 3 HOH A 34 534 153 HOH HOH . E 3 HOH A 35 535 196 HOH HOH . E 3 HOH A 36 536 60 HOH HOH . E 3 HOH A 37 537 150 HOH HOH . E 3 HOH A 38 538 14 HOH HOH . E 3 HOH A 39 539 48 HOH HOH . E 3 HOH A 40 540 116 HOH HOH . E 3 HOH A 41 541 1 HOH HOH . E 3 HOH A 42 542 148 HOH HOH . E 3 HOH A 43 543 80 HOH HOH . E 3 HOH A 44 544 130 HOH HOH . E 3 HOH A 45 545 101 HOH HOH . E 3 HOH A 46 546 92 HOH HOH . E 3 HOH A 47 547 65 HOH HOH . E 3 HOH A 48 548 66 HOH HOH . E 3 HOH A 49 549 64 HOH HOH . E 3 HOH A 50 550 129 HOH HOH . E 3 HOH A 51 551 70 HOH HOH . E 3 HOH A 52 552 204 HOH HOH . E 3 HOH A 53 553 43 HOH HOH . E 3 HOH A 54 554 63 HOH HOH . E 3 HOH A 55 555 2 HOH HOH . E 3 HOH A 56 556 4 HOH HOH . E 3 HOH A 57 557 5 HOH HOH . E 3 HOH A 58 558 6 HOH HOH . E 3 HOH A 59 559 7 HOH HOH . E 3 HOH A 60 560 8 HOH HOH . E 3 HOH A 61 561 9 HOH HOH . E 3 HOH A 62 562 10 HOH HOH . E 3 HOH A 63 563 11 HOH HOH . E 3 HOH A 64 564 12 HOH HOH . E 3 HOH A 65 565 13 HOH HOH . E 3 HOH A 66 566 15 HOH HOH . E 3 HOH A 67 567 16 HOH HOH . E 3 HOH A 68 568 17 HOH HOH . E 3 HOH A 69 569 18 HOH HOH . E 3 HOH A 70 570 19 HOH HOH . E 3 HOH A 71 571 20 HOH HOH . E 3 HOH A 72 572 22 HOH HOH . E 3 HOH A 73 573 23 HOH HOH . E 3 HOH A 74 574 24 HOH HOH . E 3 HOH A 75 575 26 HOH HOH . E 3 HOH A 76 576 27 HOH HOH . E 3 HOH A 77 577 28 HOH HOH . E 3 HOH A 78 578 29 HOH HOH . E 3 HOH A 79 579 30 HOH HOH . E 3 HOH A 80 580 31 HOH HOH . E 3 HOH A 81 581 32 HOH HOH . E 3 HOH A 82 582 34 HOH HOH . E 3 HOH A 83 583 35 HOH HOH . E 3 HOH A 84 584 36 HOH HOH . E 3 HOH A 85 585 37 HOH HOH . E 3 HOH A 86 586 38 HOH HOH . E 3 HOH A 87 587 39 HOH HOH . E 3 HOH A 88 588 40 HOH HOH . E 3 HOH A 89 589 42 HOH HOH . E 3 HOH A 90 590 44 HOH HOH . E 3 HOH A 91 591 45 HOH HOH . E 3 HOH A 92 592 46 HOH HOH . E 3 HOH A 93 593 47 HOH HOH . E 3 HOH A 94 594 49 HOH HOH . E 3 HOH A 95 595 51 HOH HOH . E 3 HOH A 96 596 53 HOH HOH . E 3 HOH A 97 597 55 HOH HOH . E 3 HOH A 98 598 56 HOH HOH . E 3 HOH A 99 599 58 HOH HOH . E 3 HOH A 100 600 61 HOH HOH . E 3 HOH A 101 601 62 HOH HOH . E 3 HOH A 102 602 68 HOH HOH . E 3 HOH A 103 603 69 HOH HOH . E 3 HOH A 104 604 72 HOH HOH . E 3 HOH A 105 605 73 HOH HOH . E 3 HOH A 106 606 75 HOH HOH . E 3 HOH A 107 607 76 HOH HOH . E 3 HOH A 108 608 77 HOH HOH . E 3 HOH A 109 609 81 HOH HOH . E 3 HOH A 110 610 82 HOH HOH . E 3 HOH A 111 611 83 HOH HOH . E 3 HOH A 112 612 84 HOH HOH . E 3 HOH A 113 613 85 HOH HOH . E 3 HOH A 114 614 86 HOH HOH . E 3 HOH A 115 615 87 HOH HOH . E 3 HOH A 116 616 89 HOH HOH . E 3 HOH A 117 617 90 HOH HOH . E 3 HOH A 118 618 93 HOH HOH . E 3 HOH A 119 619 94 HOH HOH . E 3 HOH A 120 620 95 HOH HOH . E 3 HOH A 121 621 96 HOH HOH . E 3 HOH A 122 622 97 HOH HOH . E 3 HOH A 123 623 98 HOH HOH . E 3 HOH A 124 624 99 HOH HOH . E 3 HOH A 125 625 100 HOH HOH . E 3 HOH A 126 626 103 HOH HOH . E 3 HOH A 127 627 105 HOH HOH . E 3 HOH A 128 628 106 HOH HOH . E 3 HOH A 129 629 107 HOH HOH . E 3 HOH A 130 630 108 HOH HOH . E 3 HOH A 131 631 109 HOH HOH . E 3 HOH A 132 632 110 HOH HOH . E 3 HOH A 133 633 112 HOH HOH . E 3 HOH A 134 634 113 HOH HOH . E 3 HOH A 135 635 114 HOH HOH . E 3 HOH A 136 636 115 HOH HOH . E 3 HOH A 137 637 117 HOH HOH . E 3 HOH A 138 638 118 HOH HOH . E 3 HOH A 139 639 121 HOH HOH . E 3 HOH A 140 640 123 HOH HOH . E 3 HOH A 141 641 124 HOH HOH . E 3 HOH A 142 642 125 HOH HOH . E 3 HOH A 143 643 126 HOH HOH . E 3 HOH A 144 644 127 HOH HOH . E 3 HOH A 145 645 128 HOH HOH . E 3 HOH A 146 646 131 HOH HOH . E 3 HOH A 147 647 132 HOH HOH . E 3 HOH A 148 648 133 HOH HOH . E 3 HOH A 149 649 134 HOH HOH . E 3 HOH A 150 650 135 HOH HOH . E 3 HOH A 151 651 136 HOH HOH . E 3 HOH A 152 652 137 HOH HOH . E 3 HOH A 153 653 138 HOH HOH . E 3 HOH A 154 654 140 HOH HOH . E 3 HOH A 155 655 142 HOH HOH . E 3 HOH A 156 656 145 HOH HOH . E 3 HOH A 157 657 146 HOH HOH . E 3 HOH A 158 658 147 HOH HOH . E 3 HOH A 159 659 149 HOH HOH . E 3 HOH A 160 660 151 HOH HOH . E 3 HOH A 161 661 152 HOH HOH . E 3 HOH A 162 662 154 HOH HOH . E 3 HOH A 163 663 155 HOH HOH . E 3 HOH A 164 664 156 HOH HOH . E 3 HOH A 165 665 157 HOH HOH . E 3 HOH A 166 666 158 HOH HOH . E 3 HOH A 167 667 159 HOH HOH . E 3 HOH A 168 668 161 HOH HOH . E 3 HOH A 169 669 162 HOH HOH . E 3 HOH A 170 670 163 HOH HOH . E 3 HOH A 171 671 164 HOH HOH . E 3 HOH A 172 672 166 HOH HOH . E 3 HOH A 173 673 168 HOH HOH . E 3 HOH A 174 674 169 HOH HOH . E 3 HOH A 175 675 170 HOH HOH . E 3 HOH A 176 676 171 HOH HOH . E 3 HOH A 177 677 172 HOH HOH . E 3 HOH A 178 678 173 HOH HOH . E 3 HOH A 179 679 174 HOH HOH . E 3 HOH A 180 680 175 HOH HOH . E 3 HOH A 181 681 176 HOH HOH . E 3 HOH A 182 682 177 HOH HOH . E 3 HOH A 183 683 178 HOH HOH . E 3 HOH A 184 684 179 HOH HOH . E 3 HOH A 185 685 181 HOH HOH . E 3 HOH A 186 686 182 HOH HOH . E 3 HOH A 187 687 183 HOH HOH . E 3 HOH A 188 688 184 HOH HOH . E 3 HOH A 189 689 185 HOH HOH . E 3 HOH A 190 690 187 HOH HOH . E 3 HOH A 191 691 188 HOH HOH . E 3 HOH A 192 692 189 HOH HOH . E 3 HOH A 193 693 190 HOH HOH . E 3 HOH A 194 694 191 HOH HOH . E 3 HOH A 195 695 192 HOH HOH . E 3 HOH A 196 696 194 HOH HOH . E 3 HOH A 197 697 195 HOH HOH . E 3 HOH A 198 698 197 HOH HOH . E 3 HOH A 199 699 198 HOH HOH . E 3 HOH A 200 700 199 HOH HOH . E 3 HOH A 201 701 200 HOH HOH . E 3 HOH A 202 702 201 HOH HOH . E 3 HOH A 203 703 202 HOH HOH . E 3 HOH A 204 704 203 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 23.957 21.948 19.843 1 35.52 ? C1 EDO 401 A 1 HETATM 2 O O1 EDO . . . B 2 24.355 21.946 21.221 1 32.91 ? O1 EDO 401 A 1 HETATM 3 C C2 EDO . . . B 2 25.152 22.246 18.946 1 35.56 ? C2 EDO 401 A 1 HETATM 4 O O2 EDO . . . B 2 26.087 21.17 19.128 1 37.29 ? O2 EDO 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 473 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #