data_4OXS # _model_server_result.job_id Y9kk9pEkvZ3yXL7ExFfz_A _model_server_result.datetime_utc '2024-11-21 14:52:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oxs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":402}' # _entry.id 4OXS # _exptl.entry_id 4OXS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4OXS _cell.length_a 79.89 _cell.length_b 329.02 _cell.length_c 79.95 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OXS _symmetry.cell_setting . _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,Q,R 1 1,2 C,D,K,L,M,N,O,P,S,T 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -79.89 0 39.975 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 I N N ? 3 J N N ? 3 M N N ? 3 N N N ? 3 P N N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4OXS _atom_sites.fract_transf_matrix[1][1] 0.012517 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003039 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012508 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 2CV A 1 301 300 2CV 2CV . F 2 2CV A 1 302 300 2CV 2CV . G 3 NA A 1 303 403 NA NA . H 4 BR A 1 304 501 BR 2ZB . I 3 NA B 1 401 401 NA NA . J 3 NA B 1 402 402 NA NA . K 2 2CV C 1 301 300 2CV 2CV . L 2 2CV C 1 302 300 2CV 2CV . M 3 NA C 1 303 402 NA NA . N 3 NA C 1 304 403 NA NA . O 4 BR C 1 305 501 BR 2ZB . P 3 NA D 1 401 401 NA NA . Q 5 HOH A 1 401 156 HOH HOH . Q 5 HOH A 2 402 253 HOH HOH . Q 5 HOH A 3 403 126 HOH HOH . Q 5 HOH A 4 404 267 HOH HOH . Q 5 HOH A 5 405 169 HOH HOH . Q 5 HOH A 6 406 249 HOH HOH . Q 5 HOH A 7 407 223 HOH HOH . Q 5 HOH A 8 408 131 HOH HOH . Q 5 HOH A 9 409 138 HOH HOH . Q 5 HOH A 10 410 139 HOH HOH . Q 5 HOH A 11 411 140 HOH HOH . Q 5 HOH A 12 412 144 HOH HOH . Q 5 HOH A 13 413 145 HOH HOH . Q 5 HOH A 14 414 146 HOH HOH . Q 5 HOH A 15 415 152 HOH HOH . Q 5 HOH A 16 416 153 HOH HOH . Q 5 HOH A 17 417 154 HOH HOH . Q 5 HOH A 18 418 161 HOH HOH . Q 5 HOH A 19 419 172 HOH HOH . Q 5 HOH A 20 420 179 HOH HOH . Q 5 HOH A 21 421 180 HOH HOH . Q 5 HOH A 22 422 197 HOH HOH . Q 5 HOH A 23 423 209 HOH HOH . Q 5 HOH A 24 424 216 HOH HOH . Q 5 HOH A 25 425 218 HOH HOH . Q 5 HOH A 26 426 220 HOH HOH . Q 5 HOH A 27 427 224 HOH HOH . Q 5 HOH A 28 428 229 HOH HOH . Q 5 HOH A 29 429 232 HOH HOH . Q 5 HOH A 30 430 237 HOH HOH . Q 5 HOH A 31 431 244 HOH HOH . Q 5 HOH A 32 432 250 HOH HOH . Q 5 HOH A 33 433 257 HOH HOH . Q 5 HOH A 34 434 261 HOH HOH . Q 5 HOH A 35 435 262 HOH HOH . Q 5 HOH A 36 436 271 HOH HOH . Q 5 HOH A 37 437 279 HOH HOH . Q 5 HOH A 38 438 281 HOH HOH . Q 5 HOH A 39 439 285 HOH HOH . Q 5 HOH A 40 440 286 HOH HOH . Q 5 HOH A 41 441 291 HOH HOH . Q 5 HOH A 42 442 298 HOH HOH . R 5 HOH B 1 501 132 HOH HOH . R 5 HOH B 2 502 137 HOH HOH . R 5 HOH B 3 503 173 HOH HOH . R 5 HOH B 4 504 259 HOH HOH . R 5 HOH B 5 505 127 HOH HOH . R 5 HOH B 6 506 134 HOH HOH . R 5 HOH B 7 507 135 HOH HOH . R 5 HOH B 8 508 143 HOH HOH . R 5 HOH B 9 509 149 HOH HOH . R 5 HOH B 10 510 157 HOH HOH . R 5 HOH B 11 511 160 HOH HOH . R 5 HOH B 12 512 171 HOH HOH . R 5 HOH B 13 513 182 HOH HOH . R 5 HOH B 14 514 183 HOH HOH . R 5 HOH B 15 515 185 HOH HOH . R 5 HOH B 16 516 187 HOH HOH . R 5 HOH B 17 517 205 HOH HOH . R 5 HOH B 18 518 211 HOH HOH . R 5 HOH B 19 519 221 HOH HOH . R 5 HOH B 20 520 225 HOH HOH . R 5 HOH B 21 521 231 HOH HOH . R 5 HOH B 22 522 234 HOH HOH . R 5 HOH B 23 523 246 HOH HOH . R 5 HOH B 24 524 248 HOH HOH . R 5 HOH B 25 525 263 HOH HOH . R 5 HOH B 26 526 264 HOH HOH . R 5 HOH B 27 527 265 HOH HOH . R 5 HOH B 28 528 269 HOH HOH . R 5 HOH B 29 529 276 HOH HOH . R 5 HOH B 30 530 277 HOH HOH . R 5 HOH B 31 531 278 HOH HOH . R 5 HOH B 32 532 288 HOH HOH . R 5 HOH B 33 533 293 HOH HOH . R 5 HOH B 34 534 295 HOH HOH . S 5 HOH C 1 401 136 HOH HOH . S 5 HOH C 2 402 228 HOH HOH . S 5 HOH C 3 403 189 HOH HOH . S 5 HOH C 4 404 162 HOH HOH . S 5 HOH C 5 405 240 HOH HOH . S 5 HOH C 6 406 130 HOH HOH . S 5 HOH C 7 407 141 HOH HOH . S 5 HOH C 8 408 142 HOH HOH . S 5 HOH C 9 409 147 HOH HOH . S 5 HOH C 10 410 155 HOH HOH . S 5 HOH C 11 411 163 HOH HOH . S 5 HOH C 12 412 168 HOH HOH . S 5 HOH C 13 413 170 HOH HOH . S 5 HOH C 14 414 174 HOH HOH . S 5 HOH C 15 415 175 HOH HOH . S 5 HOH C 16 416 181 HOH HOH . S 5 HOH C 17 417 184 HOH HOH . S 5 HOH C 18 418 188 HOH HOH . S 5 HOH C 19 419 190 HOH HOH . S 5 HOH C 20 420 191 HOH HOH . S 5 HOH C 21 421 193 HOH HOH . S 5 HOH C 22 422 194 HOH HOH . S 5 HOH C 23 423 198 HOH HOH . S 5 HOH C 24 424 199 HOH HOH . S 5 HOH C 25 425 200 HOH HOH . S 5 HOH C 26 426 202 HOH HOH . S 5 HOH C 27 427 207 HOH HOH . S 5 HOH C 28 428 208 HOH HOH . S 5 HOH C 29 429 217 HOH HOH . S 5 HOH C 30 430 219 HOH HOH . S 5 HOH C 31 431 227 HOH HOH . S 5 HOH C 32 432 230 HOH HOH . S 5 HOH C 33 433 235 HOH HOH . S 5 HOH C 34 434 236 HOH HOH . S 5 HOH C 35 435 239 HOH HOH . S 5 HOH C 36 436 247 HOH HOH . S 5 HOH C 37 437 251 HOH HOH . S 5 HOH C 38 438 254 HOH HOH . S 5 HOH C 39 439 256 HOH HOH . S 5 HOH C 40 440 258 HOH HOH . S 5 HOH C 41 441 270 HOH HOH . S 5 HOH C 42 442 272 HOH HOH . S 5 HOH C 43 443 274 HOH HOH . S 5 HOH C 44 444 275 HOH HOH . S 5 HOH C 45 445 284 HOH HOH . S 5 HOH C 46 446 294 HOH HOH . T 5 HOH D 1 501 133 HOH HOH . T 5 HOH D 2 502 226 HOH HOH . T 5 HOH D 3 503 177 HOH HOH . T 5 HOH D 4 504 128 HOH HOH . T 5 HOH D 5 505 166 HOH HOH . T 5 HOH D 6 506 148 HOH HOH . T 5 HOH D 7 507 292 HOH HOH . T 5 HOH D 8 508 150 HOH HOH . T 5 HOH D 9 509 296 HOH HOH . T 5 HOH D 10 510 165 HOH HOH . T 5 HOH D 11 511 129 HOH HOH . T 5 HOH D 12 512 151 HOH HOH . T 5 HOH D 13 513 158 HOH HOH . T 5 HOH D 14 514 159 HOH HOH . T 5 HOH D 15 515 164 HOH HOH . T 5 HOH D 16 516 167 HOH HOH . T 5 HOH D 17 517 176 HOH HOH . T 5 HOH D 18 518 178 HOH HOH . T 5 HOH D 19 519 186 HOH HOH . T 5 HOH D 20 520 192 HOH HOH . T 5 HOH D 21 521 195 HOH HOH . T 5 HOH D 22 522 201 HOH HOH . T 5 HOH D 23 523 203 HOH HOH . T 5 HOH D 24 524 204 HOH HOH . T 5 HOH D 25 525 206 HOH HOH . T 5 HOH D 26 526 210 HOH HOH . T 5 HOH D 27 527 212 HOH HOH . T 5 HOH D 28 528 214 HOH HOH . T 5 HOH D 29 529 215 HOH HOH . T 5 HOH D 30 530 222 HOH HOH . T 5 HOH D 31 531 233 HOH HOH . T 5 HOH D 32 532 241 HOH HOH . T 5 HOH D 33 533 242 HOH HOH . T 5 HOH D 34 534 243 HOH HOH . T 5 HOH D 35 535 245 HOH HOH . T 5 HOH D 36 536 252 HOH HOH . T 5 HOH D 37 537 255 HOH HOH . T 5 HOH D 38 538 266 HOH HOH . T 5 HOH D 39 539 273 HOH HOH . T 5 HOH D 40 540 280 HOH HOH . T 5 HOH D 41 541 282 HOH HOH . T 5 HOH D 42 542 283 HOH HOH . T 5 HOH D 43 543 287 HOH HOH . T 5 HOH D 44 544 289 HOH HOH . T 5 HOH D 45 545 290 HOH HOH . T 5 HOH D 46 546 297 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x -39.977 _atom_site.Cartn_y -64.736 _atom_site.Cartn_z 20.033 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 55.02 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #