data_4OXX # _model_server_result.job_id jiQTvR4O8xoQl5W1MwwftA _model_server_result.datetime_utc '2025-04-22 11:16:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4oxx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 4OXX # _exptl.entry_id 4OXX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4OXX _cell.length_a 82.109 _cell.length_b 82.109 _cell.length_c 37.042 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4OXX _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 4OXX _atom_sites.fract_transf_matrix[1][1] 0.012179 _atom_sites.fract_transf_matrix[1][2] 0.007032 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014063 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026996 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 200 200 FMN FMN . C 3 HOH A 1 301 216 HOH HOH . C 3 HOH A 2 302 146 HOH HOH . C 3 HOH A 3 303 217 HOH HOH . C 3 HOH A 4 304 29 HOH HOH . C 3 HOH A 5 305 213 HOH HOH . C 3 HOH A 6 306 223 HOH HOH . C 3 HOH A 7 307 164 HOH HOH . C 3 HOH A 8 308 125 HOH HOH . C 3 HOH A 9 309 174 HOH HOH . C 3 HOH A 10 310 166 HOH HOH . C 3 HOH A 11 311 45 HOH HOH . C 3 HOH A 12 312 60 HOH HOH . C 3 HOH A 13 313 66 HOH HOH . C 3 HOH A 14 314 42 HOH HOH . C 3 HOH A 15 315 169 HOH HOH . C 3 HOH A 16 316 39 HOH HOH . C 3 HOH A 17 317 136 HOH HOH . C 3 HOH A 18 318 116 HOH HOH . C 3 HOH A 19 319 104 HOH HOH . C 3 HOH A 20 320 199 HOH HOH . C 3 HOH A 21 321 76 HOH HOH . C 3 HOH A 22 322 208 HOH HOH . C 3 HOH A 23 323 221 HOH HOH . C 3 HOH A 24 324 17 HOH HOH . C 3 HOH A 25 325 75 HOH HOH . C 3 HOH A 26 326 162 HOH HOH . C 3 HOH A 27 327 163 HOH HOH . C 3 HOH A 28 328 52 HOH HOH . C 3 HOH A 29 329 69 HOH HOH . C 3 HOH A 30 330 207 HOH HOH . C 3 HOH A 31 331 25 HOH HOH . C 3 HOH A 32 332 159 HOH HOH . C 3 HOH A 33 333 6 HOH HOH . C 3 HOH A 34 334 10 HOH HOH . C 3 HOH A 35 335 95 HOH HOH . C 3 HOH A 36 336 129 HOH HOH . C 3 HOH A 37 337 234 HOH HOH . C 3 HOH A 38 338 8 HOH HOH . C 3 HOH A 39 339 40 HOH HOH . C 3 HOH A 40 340 68 HOH HOH . C 3 HOH A 41 341 36 HOH HOH . C 3 HOH A 42 342 4 HOH HOH . C 3 HOH A 43 343 86 HOH HOH . C 3 HOH A 44 344 157 HOH HOH . C 3 HOH A 45 345 97 HOH HOH . C 3 HOH A 46 346 121 HOH HOH . C 3 HOH A 47 347 96 HOH HOH . C 3 HOH A 48 348 130 HOH HOH . C 3 HOH A 49 349 23 HOH HOH . C 3 HOH A 50 350 131 HOH HOH . C 3 HOH A 51 351 19 HOH HOH . C 3 HOH A 52 352 194 HOH HOH . C 3 HOH A 53 353 67 HOH HOH . C 3 HOH A 54 354 202 HOH HOH . C 3 HOH A 55 355 51 HOH HOH . C 3 HOH A 56 356 176 HOH HOH . C 3 HOH A 57 357 32 HOH HOH . C 3 HOH A 58 358 21 HOH HOH . C 3 HOH A 59 359 48 HOH HOH . C 3 HOH A 60 360 109 HOH HOH . C 3 HOH A 61 361 237 HOH HOH . C 3 HOH A 62 362 87 HOH HOH . C 3 HOH A 63 363 151 HOH HOH . C 3 HOH A 64 364 103 HOH HOH . C 3 HOH A 65 365 141 HOH HOH . C 3 HOH A 66 366 92 HOH HOH . C 3 HOH A 67 367 209 HOH HOH . C 3 HOH A 68 368 120 HOH HOH . C 3 HOH A 69 369 84 HOH HOH . C 3 HOH A 70 370 145 HOH HOH . C 3 HOH A 71 371 90 HOH HOH . C 3 HOH A 72 372 119 HOH HOH . C 3 HOH A 73 373 128 HOH HOH . C 3 HOH A 74 374 206 HOH HOH . C 3 HOH A 75 375 212 HOH HOH . C 3 HOH A 76 376 210 HOH HOH . C 3 HOH A 77 377 56 HOH HOH . C 3 HOH A 78 378 72 HOH HOH . C 3 HOH A 79 379 165 HOH HOH . C 3 HOH A 80 380 182 HOH HOH . C 3 HOH A 81 381 71 HOH HOH . C 3 HOH A 82 382 27 HOH HOH . C 3 HOH A 83 383 49 HOH HOH . C 3 HOH A 84 384 7 HOH HOH . C 3 HOH A 85 385 226 HOH HOH . C 3 HOH A 86 386 77 HOH HOH . C 3 HOH A 87 387 204 HOH HOH . C 3 HOH A 88 388 74 HOH HOH . C 3 HOH A 89 389 148 HOH HOH . C 3 HOH A 90 390 214 HOH HOH . C 3 HOH A 91 391 230 HOH HOH . C 3 HOH A 92 392 192 HOH HOH . C 3 HOH A 93 393 172 HOH HOH . C 3 HOH A 94 394 211 HOH HOH . C 3 HOH A 95 395 177 HOH HOH . C 3 HOH A 96 396 147 HOH HOH . C 3 HOH A 97 397 111 HOH HOH . C 3 HOH A 98 398 106 HOH HOH . C 3 HOH A 99 399 138 HOH HOH . C 3 HOH A 100 400 238 HOH HOH . C 3 HOH A 101 401 170 HOH HOH . C 3 HOH A 102 402 105 HOH HOH . C 3 HOH A 103 403 181 HOH HOH . C 3 HOH A 104 404 228 HOH HOH . C 3 HOH A 105 405 41 HOH HOH . C 3 HOH A 106 406 34 HOH HOH . C 3 HOH A 107 407 133 HOH HOH . C 3 HOH A 108 408 239 HOH HOH . C 3 HOH A 109 409 118 HOH HOH . C 3 HOH A 110 410 93 HOH HOH . C 3 HOH A 111 411 229 HOH HOH . C 3 HOH A 112 412 18 HOH HOH . C 3 HOH A 113 413 140 HOH HOH . C 3 HOH A 114 414 168 HOH HOH . C 3 HOH A 115 415 160 HOH HOH . C 3 HOH A 116 416 183 HOH HOH . C 3 HOH A 117 417 53 HOH HOH . C 3 HOH A 118 418 232 HOH HOH . C 3 HOH A 119 419 191 HOH HOH . C 3 HOH A 120 420 158 HOH HOH . C 3 HOH A 121 421 26 HOH HOH . C 3 HOH A 122 422 33 HOH HOH . C 3 HOH A 123 423 201 HOH HOH . C 3 HOH A 124 424 200 HOH HOH . C 3 HOH A 125 425 187 HOH HOH . C 3 HOH A 126 426 46 HOH HOH . C 3 HOH A 127 427 222 HOH HOH . C 3 HOH A 128 428 83 HOH HOH . C 3 HOH A 129 429 108 HOH HOH . C 3 HOH A 130 430 196 HOH HOH . C 3 HOH A 131 431 1 HOH HOH . C 3 HOH A 132 432 2 HOH HOH . C 3 HOH A 133 433 3 HOH HOH . C 3 HOH A 134 434 5 HOH HOH . C 3 HOH A 135 435 9 HOH HOH . C 3 HOH A 136 436 11 HOH HOH . C 3 HOH A 137 437 12 HOH HOH . C 3 HOH A 138 438 13 HOH HOH . C 3 HOH A 139 439 14 HOH HOH . C 3 HOH A 140 440 15 HOH HOH . C 3 HOH A 141 441 16 HOH HOH . C 3 HOH A 142 442 20 HOH HOH . C 3 HOH A 143 443 22 HOH HOH . C 3 HOH A 144 444 24 HOH HOH . C 3 HOH A 145 445 28 HOH HOH . C 3 HOH A 146 446 30 HOH HOH . C 3 HOH A 147 447 31 HOH HOH . C 3 HOH A 148 448 35 HOH HOH . C 3 HOH A 149 449 37 HOH HOH . C 3 HOH A 150 450 38 HOH HOH . C 3 HOH A 151 451 43 HOH HOH . C 3 HOH A 152 452 44 HOH HOH . C 3 HOH A 153 453 47 HOH HOH . C 3 HOH A 154 454 50 HOH HOH . C 3 HOH A 155 455 54 HOH HOH . C 3 HOH A 156 456 55 HOH HOH . C 3 HOH A 157 457 57 HOH HOH . C 3 HOH A 158 458 58 HOH HOH . C 3 HOH A 159 459 59 HOH HOH . C 3 HOH A 160 460 61 HOH HOH . C 3 HOH A 161 461 62 HOH HOH . C 3 HOH A 162 462 63 HOH HOH . C 3 HOH A 163 463 64 HOH HOH . C 3 HOH A 164 464 65 HOH HOH . C 3 HOH A 165 465 70 HOH HOH . C 3 HOH A 166 466 73 HOH HOH . C 3 HOH A 167 467 78 HOH HOH . C 3 HOH A 168 468 79 HOH HOH . C 3 HOH A 169 469 80 HOH HOH . C 3 HOH A 170 470 81 HOH HOH . C 3 HOH A 171 471 82 HOH HOH . C 3 HOH A 172 472 85 HOH HOH . C 3 HOH A 173 473 88 HOH HOH . C 3 HOH A 174 474 89 HOH HOH . C 3 HOH A 175 475 91 HOH HOH . C 3 HOH A 176 476 94 HOH HOH . C 3 HOH A 177 477 98 HOH HOH . C 3 HOH A 178 478 99 HOH HOH . C 3 HOH A 179 479 100 HOH HOH . C 3 HOH A 180 480 101 HOH HOH . C 3 HOH A 181 481 102 HOH HOH . C 3 HOH A 182 482 107 HOH HOH . C 3 HOH A 183 483 110 HOH HOH . C 3 HOH A 184 484 112 HOH HOH . C 3 HOH A 185 485 113 HOH HOH . C 3 HOH A 186 486 115 HOH HOH . C 3 HOH A 187 487 117 HOH HOH . C 3 HOH A 188 488 122 HOH HOH . C 3 HOH A 189 489 123 HOH HOH . C 3 HOH A 190 490 124 HOH HOH . C 3 HOH A 191 491 126 HOH HOH . C 3 HOH A 192 492 127 HOH HOH . C 3 HOH A 193 493 132 HOH HOH . C 3 HOH A 194 494 134 HOH HOH . C 3 HOH A 195 495 135 HOH HOH . C 3 HOH A 196 496 137 HOH HOH . C 3 HOH A 197 497 139 HOH HOH . C 3 HOH A 198 498 142 HOH HOH . C 3 HOH A 199 499 143 HOH HOH . C 3 HOH A 200 500 144 HOH HOH . C 3 HOH A 201 501 149 HOH HOH . C 3 HOH A 202 502 150 HOH HOH . C 3 HOH A 203 503 152 HOH HOH . C 3 HOH A 204 504 153 HOH HOH . C 3 HOH A 205 505 154 HOH HOH . C 3 HOH A 206 506 155 HOH HOH . C 3 HOH A 207 507 156 HOH HOH . C 3 HOH A 208 508 167 HOH HOH . C 3 HOH A 209 509 171 HOH HOH . C 3 HOH A 210 510 173 HOH HOH . C 3 HOH A 211 511 178 HOH HOH . C 3 HOH A 212 512 180 HOH HOH . C 3 HOH A 213 513 184 HOH HOH . C 3 HOH A 214 514 185 HOH HOH . C 3 HOH A 215 515 186 HOH HOH . C 3 HOH A 216 516 188 HOH HOH . C 3 HOH A 217 517 190 HOH HOH . C 3 HOH A 218 518 193 HOH HOH . C 3 HOH A 219 519 195 HOH HOH . C 3 HOH A 220 520 197 HOH HOH . C 3 HOH A 221 521 203 HOH HOH . C 3 HOH A 222 522 205 HOH HOH . C 3 HOH A 223 523 215 HOH HOH . C 3 HOH A 224 524 218 HOH HOH . C 3 HOH A 225 525 224 HOH HOH . C 3 HOH A 226 526 235 HOH HOH . C 3 HOH A 227 527 236 HOH HOH . C 3 HOH A 228 528 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 -9.588 -41.54 8.746 1 9.23 ? N1 FMN 200 A 1 HETATM 2 C C2 FMN . . . B 2 -8.662 -41.529 9.739 1 9.6 ? C2 FMN 200 A 1 HETATM 3 O O2 FMN . . . B 2 -8.541 -40.528 10.461 1 10.1 ? O2 FMN 200 A 1 HETATM 4 N N3 FMN . . . B 2 -7.873 -42.612 9.974 1 10.07 ? N3 FMN 200 A 1 HETATM 5 C C4 FMN . . . B 2 -8.001 -43.773 9.278 1 10.33 ? C4 FMN 200 A 1 HETATM 6 O O4 FMN . . . B 2 -7.223 -44.731 9.498 1 11.57 ? O4 FMN 200 A 1 HETATM 7 C C4A FMN . . . B 2 -9.005 -43.82 8.271 1 9.84 ? C4A FMN 200 A 1 HETATM 8 N N5 FMN . . . B 2 -9.201 -44.964 7.554 1 11.71 ? N5 FMN 200 A 1 HETATM 9 C C5A FMN . . . B 2 -10.257 -45.004 6.641 1 10.75 ? C5A FMN 200 A 1 HETATM 10 C C6 FMN . . . B 2 -10.561 -46.215 6.036 1 12.64 ? C6 FMN 200 A 1 HETATM 11 C C7 FMN . . . B 2 -11.59 -46.299 5.122 1 12.95 ? C7 FMN 200 A 1 HETATM 12 C C7M FMN . . . B 2 -11.832 -47.625 4.432 1 17.25 ? C7M FMN 200 A 1 HETATM 13 C C8 FMN . . . B 2 -12.33 -45.147 4.812 1 12.49 ? C8 FMN 200 A 1 HETATM 14 C C8M FMN . . . B 2 -13.46 -45.182 3.798 1 15.26 ? C8M FMN 200 A 1 HETATM 15 C C9 FMN . . . B 2 -12.026 -43.908 5.406 1 11.73 ? C9 FMN 200 A 1 HETATM 16 C C9A FMN . . . B 2 -10.981 -43.854 6.341 1 10.13 ? C9A FMN 200 A 1 HETATM 17 N N10 FMN . . . B 2 -10.669 -42.645 7.002 1 9.9 ? N10 FMN 200 A 1 HETATM 18 C C10 FMN . . . B 2 -9.753 -42.661 8.035 1 9.79 ? C10 FMN 200 A 1 HETATM 19 C C1' FMN . . . B 2 -11.445 -41.412 6.761 1 10.1 ? C1' FMN 200 A 1 HETATM 20 C C2' FMN . . . B 2 -10.933 -40.632 5.514 1 10.13 ? C2' FMN 200 A 1 HETATM 21 O O2' FMN . . . B 2 -9.605 -40.157 5.677 1 9.84 ? O2' FMN 200 A 1 HETATM 22 C C3' FMN . . . B 2 -11.845 -39.424 5.313 1 10.61 ? C3' FMN 200 A 1 HETATM 23 O O3' FMN . . . B 2 -13.134 -39.945 4.844 1 12.07 ? O3' FMN 200 A 1 HETATM 24 C C4' FMN . . . B 2 -11.315 -38.335 4.359 1 9.73 ? C4' FMN 200 A 1 HETATM 25 O O4' FMN . . . B 2 -12.195 -37.233 4.329 1 11.27 ? O4' FMN 200 A 1 HETATM 26 C C5' FMN . . . B 2 -11.15 -38.848 2.957 1 9.87 ? C5' FMN 200 A 1 HETATM 27 O O5' FMN . . . B 2 -10.502 -37.851 2.154 1 9.08 ? O5' FMN 200 A 1 HETATM 28 P P FMN . . . B 2 -10.415 -38.042 0.591 1 8.8 ? P FMN 200 A 1 HETATM 29 O O1P FMN . . . B 2 -9.913 -39.447 0.31 1 8.93 ? O1P FMN 200 A 1 HETATM 30 O O2P FMN . . . B 2 -11.816 -37.843 0.027 1 9.95 ? O2P FMN 200 A 1 HETATM 31 O O3P FMN . . . B 2 -9.477 -36.97 0.141 1 9.2 ? O3P FMN 200 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #